RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 GMPSP49915 693 aaPredicted RBP23.95■■□□□ 1.42
CTDSP1-213ENST00000496785 PANK1Q8TE04 598 aa23.95■■□□□ 1.42
CTDSP1-213ENST00000496785 DPF2Q92785 391 aa23.95■■□□□ 1.42
CTDSP1-213ENST00000496785 COPRSQ9NQ92 184 aa23.95■■□□□ 1.42
CTDSP1-213ENST00000496785 GPRC5DQ9NZD1 345 aa23.95■■□□□ 1.42
CTDSP1-213ENST00000496785 DDX19BQ9UMR2 479 aa23.95■■□□□ 1.42
CTDSP1-213ENST00000496785 USP17L3A6NCW0 530 aa23.94■■□□□ 1.42
CTDSP1-213ENST00000496785 USP17L4A6NCW7 530 aa23.94■■□□□ 1.42
CTDSP1-213ENST00000496785 ZBTB7BO15156 539 aaPredicted RBP23.94■■□□□ 1.42
CTDSP1-213ENST00000496785 PDE8BO95263 885 aa23.94■■□□□ 1.42
CTDSP1-213ENST00000496785 PDE3AQ14432 1141 aa23.94■■□□□ 1.42
CTDSP1-213ENST00000496785 MVPQ14764 893 aaKnown RBP23.94■■□□□ 1.42
CTDSP1-213ENST00000496785 USP17L1Q7RTZ2 530 aa23.94■■□□□ 1.42
CTDSP1-213ENST00000496785 WTIPA6NIX2 430 aaPredicted RBP23.93■■□□□ 1.42
CTDSP1-213ENST00000496785 VIL1P09327 827 aaKnown RBP23.93■■□□□ 1.42
CTDSP1-213ENST00000496785 IL15P40933 162 aaPredicted RBP23.93■■□□□ 1.42
CTDSP1-213ENST00000496785 TXNRD3Q86VQ6 643 aa23.93■■□□□ 1.42
CTDSP1-213ENST00000496785 LDHDQ86WU2 507 aa23.93■■□□□ 1.42
CTDSP1-213ENST00000496785 ADARB2Q9NS39 739 aaKnown RBP23.93■■□□□ 1.42
CTDSP1-213ENST00000496785 ZNF609O15014 1411 aa23.93■■□□□ 1.42
CTDSP1-213ENST00000496785 H7C1D1 291 aa23.92■■□□□ 1.42
CTDSP1-213ENST00000496785 PUM3Q15397 648 aaKnown RBP23.92■■□□□ 1.42
CTDSP1-213ENST00000496785 EAPPQ56P03 285 aaPredicted RBP23.92■■□□□ 1.42
CTDSP1-213ENST00000496785 USP50Q70EL3 339 aaPredicted RBP23.92■■□□□ 1.42
CTDSP1-213ENST00000496785 AGBL3Q8NEM8 1001 aa23.92■■□□□ 1.42
CTDSP1-213ENST00000496785 SIL1Q9H173 461 aa23.92■■□□□ 1.42
CTDSP1-213ENST00000496785 MYO3BQ8WXR4 1341 aa23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 IFIT1P09914 478 aaKnown RBP23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 KLRK1P26718 216 aa23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 EPS15P42566 896 aa23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 STRIP1Q5VSL9 837 aa23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 VGLL2Q8N8G2 317 aa23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 CD209Q9NNX6 404 aa23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 CEP126Q9P2H0 1117 aa23.91■■□□□ 1.42
CTDSP1-213ENST00000496785 IRS2Q9Y4H2 1338 aa23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 PSME4Q14997 1843 aa23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 SNAP23O00161 211 aa23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 CAVIN4Q5BKX8 364 aa23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 CHADLQ6NUI6 762 aa23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 RSBN1LQ6PCB5 846 aaPredicted RBP23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 KCNQ5Q9NR82 932 aa23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 CNOT7Q9UIV1 285 aaKnown RBP23.9■■□□□ 1.42
CTDSP1-213ENST00000496785 ATG9AQ7Z3C6 839 aa23.89■■□□□ 1.41
CTDSP1-213ENST00000496785 VPS37DQ86XT2 251 aa23.89■■□□□ 1.41
CTDSP1-213ENST00000496785 FBXW7Q969H0 707 aa23.89■■□□□ 1.41
CTDSP1-213ENST00000496785 CLEC11AQ9Y240 323 aa23.89■■□□□ 1.41
CTDSP1-213ENST00000496785 COG6Q9Y2V7 657 aa23.89■■□□□ 1.41
CTDSP1-213ENST00000496785 ZBTB12Q9Y330 459 aaPredicted RBP23.89■■□□□ 1.41
CTDSP1-213ENST00000496785 SCN9AQ15858 1988 aa23.89■■□□□ 1.41
CTDSP1-213ENST00000496785 SLC5A1P13866 664 aa23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 IL1R1P14778 569 aa23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 HIBADHP31937 336 aaKnown RBP23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 MMP14P50281 582 aa23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 ATP8B2P98198 1209 aa23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 TTLL5Q6EMB2 1281 aa23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 MICALL2Q8IY33 904 aa23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 LPIN2Q92539 896 aa23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 PA2G4Q9UQ80 394 aaKnown RBP23.88■■□□□ 1.41
CTDSP1-213ENST00000496785 PNMA6EA0A0J9YXQ4 647 aa23.86■■□□□ 1.41
CTDSP1-213ENST00000496785 G3BP1Q13283 466 aaKnown RBP eCLIP23.86■■□□□ 1.41
CTDSP1-213ENST00000496785 C1orf115Q9H7X2 142 aa23.86■■□□□ 1.41
CTDSP1-213ENST00000496785 FGFR2P21802 821 aa23.85■■□□□ 1.41
CTDSP1-213ENST00000496785 GTF2IP78347 998 aa23.85■■□□□ 1.41
CTDSP1-213ENST00000496785 POLA2Q14181 598 aa23.85■■□□□ 1.41
CTDSP1-213ENST00000496785 ATP2B3Q16720 1220 aa23.85■■□□□ 1.41
CTDSP1-213ENST00000496785 DACT2Q5SW24 774 aa23.85■■□□□ 1.41
CTDSP1-213ENST00000496785 SSH3Q8TE77 659 aa23.85■■□□□ 1.41
CTDSP1-213ENST00000496785 AKAP2Q9Y2D5 859 aa23.85■■□□□ 1.41
CTDSP1-213ENST00000496785 HSPA6P17066 643 aa23.84■■□□□ 1.41
CTDSP1-213ENST00000496785 GYG1P46976 350 aa23.84■■□□□ 1.41
CTDSP1-213ENST00000496785 OGFOD1Q8N543 542 aa23.84■■□□□ 1.41
CTDSP1-213ENST00000496785 FAM84BQ96KN1 310 aaPredicted RBP23.84■■□□□ 1.41
CTDSP1-213ENST00000496785 ADAMTSL1Q8N6G6 1762 aa23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 SASH1O94885 1247 aa23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 USP17L8P0C7I0 530 aa23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 POTEIP0CG38 1075 aa23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 POTEJP0CG39 1038 aa23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 FKBP1AP62942 108 aaKnown RBP23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 TDRD7Q8NHU6 1098 aaKnown RBP23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 ZC3H15Q8WU90 426 aaKnown RBP23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 GMLQ99445 158 aa23.83■■□□□ 1.41
CTDSP1-213ENST00000496785 FRAT2O75474 233 aaPredicted RBP23.82■■□□□ 1.4
CTDSP1-213ENST00000496785 RRP1P56182 461 aaKnown RBP23.82■■□□□ 1.4
CTDSP1-213ENST00000496785 CEP85Q6P2H3 762 aa23.82■■□□□ 1.4
CTDSP1-213ENST00000496785 FBXO33Q7Z6M2 555 aa23.82■■□□□ 1.4
CTDSP1-213ENST00000496785 ZBTB40Q9NUA8 1239 aa23.82■■□□□ 1.4
CTDSP1-213ENST00000496785 HDAC9Q9UKV0 1011 aa23.82■■□□□ 1.4
CTDSP1-213ENST00000496785 HMMRO75330 724 aa23.81■■□□□ 1.4
CTDSP1-213ENST00000496785 ZNF280AP59817 542 aaPredicted RBP23.81■■□□□ 1.4
CTDSP1-213ENST00000496785 OS9Q13438 667 aaPredicted RBP23.81■■□□□ 1.4
CTDSP1-213ENST00000496785 RPAP2Q8IXW5 612 aaPredicted RBP23.81■■□□□ 1.4
CTDSP1-213ENST00000496785 FAM205AQ6ZU69 1335 aa23.81■■□□□ 1.4
CTDSP1-213ENST00000496785 KIF4BQ2VIQ3 1234 aa23.8■■□□□ 1.4
CTDSP1-213ENST00000496785 C20orf194Q5TEA3 1177 aa23.8■■□□□ 1.4
CTDSP1-213ENST00000496785 GNL3LQ9NVN8 582 aaKnown RBP23.8■■□□□ 1.4
CTDSP1-213ENST00000496785 SURF6O75683 361 aaKnown RBP23.79■■□□□ 1.4
CTDSP1-213ENST00000496785 APLP1P51693 650 aa23.79■■□□□ 1.4
CTDSP1-213ENST00000496785 TBC1D10BQ4KMP7 808 aaPredicted RBP23.79■■□□□ 1.4
CTDSP1-213ENST00000496785 TRPM4Q8TD43 1214 aa23.79■■□□□ 1.4
CTDSP1-213ENST00000496785 TBC1D22AQ8WUA7 517 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms