RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 TMX4Q9H1E5 349 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-231ENST00000494043 PPP1R1BQ9UD71 204 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-231ENST00000494043 GGA1Q9UJY5 639 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 NSFL1CQ9UNZ2 370 aaKnown RBP13.92□□□□□ -0.18
MCF2L-231ENST00000494043 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 IRS2Q9Y4H2 1338 aa13.91□□□□□ -0.18
MCF2L-231ENST00000494043 WTIPA6NIX2 430 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-231ENST00000494043 UFL1O94874 794 aa13.91□□□□□ -0.18
MCF2L-231ENST00000494043 PHKA1P46020 1223 aa13.91□□□□□ -0.18
MCF2L-231ENST00000494043 CCDC102BQ68D86 513 aa13.91□□□□□ -0.18
MCF2L-231ENST00000494043 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
MCF2L-231ENST00000494043 C7orf43Q8WVR3 580 aa13.91□□□□□ -0.18
MCF2L-231ENST00000494043 ZNF512BQ96KM6 892 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-231ENST00000494043 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 UQCRFS1P1P0C7P4 283 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 SDSP20132 328 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 KLRK1P26718 216 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 ARID4AP29374 1257 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-231ENST00000494043 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 C15orf52Q6ZUT6 534 aaKnown RBP13.9□□□□□ -0.18
MCF2L-231ENST00000494043 MPNDQ8N594 471 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 TBC1D16Q8TBP0 767 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 HAUS7Q99871 368 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 BOLA2Q9H3K6 86 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 PIM2Q9P1W9 311 aa13.9□□□□□ -0.18
MCF2L-231ENST00000494043 BRCA1P38398 1863 aaKnown RBP13.89□□□□□ -0.19
MCF2L-231ENST00000494043 MED23Q9ULK4 1368 aa13.89□□□□□ -0.19
MCF2L-231ENST00000494043 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
MCF2L-231ENST00000494043 MAP4K4O95819 1239 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-231ENST00000494043 GYG1P46976 350 aa13.89□□□□□ -0.19
MCF2L-231ENST00000494043 BCAMP50895 628 aa13.89□□□□□ -0.19
MCF2L-231ENST00000494043 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
MCF2L-231ENST00000494043 DPP8Q6V1X1 898 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-231ENST00000494043 FAM84BQ96KN1 310 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-231ENST00000494043 POLLQ9UGP5 575 aa13.89□□□□□ -0.19
MCF2L-231ENST00000494043 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
MCF2L-231ENST00000494043 C21orf2O43822 256 aa13.88□□□□□ -0.19
MCF2L-231ENST00000494043 SCARF1Q14162 830 aa13.88□□□□□ -0.19
MCF2L-231ENST00000494043 DALRD3Q5D0E6 543 aaKnown RBP13.88□□□□□ -0.19
MCF2L-231ENST00000494043 FBXO33Q7Z6M2 555 aa13.88□□□□□ -0.19
MCF2L-231ENST00000494043 CNTROBQ8N137 903 aa13.88□□□□□ -0.19
MCF2L-231ENST00000494043 NLGN2Q8NFZ4 835 aa13.88□□□□□ -0.19
MCF2L-231ENST00000494043 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
MCF2L-231ENST00000494043 GPR101Q96P66 508 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-231ENST00000494043 DNAJC2Q99543 621 aaKnown RBP13.88□□□□□ -0.19
MCF2L-231ENST00000494043 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
MCF2L-231ENST00000494043 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-231ENST00000494043 CDC45O75419 566 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 HIBADHP31937 336 aaKnown RBP13.87□□□□□ -0.19
MCF2L-231ENST00000494043 MCAMP43121 646 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 RASGRF1Q13972 1273 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 C8orf34Q49A92 452 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 GRIPAP1Q4V328 841 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 CCDC93Q567U6 631 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 TXNRD3Q86VQ6 643 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 VPS37DQ86XT2 251 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 RTFDC1Q9BY42 306 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-231ENST00000494043 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
MCF2L-231ENST00000494043 SEMA3EO15041 775 aa13.86□□□□□ -0.19
MCF2L-231ENST00000494043 ZBTB22O15209 634 aa13.86□□□□□ -0.19
MCF2L-231ENST00000494043 PI16Q6UXB8 463 aa13.86□□□□□ -0.19
MCF2L-231ENST00000494043 ZNF804AQ7Z570 1209 aa13.86□□□□□ -0.19
MCF2L-231ENST00000494043 EDC3Q96F86 508 aaKnown RBP13.86□□□□□ -0.19
MCF2L-231ENST00000494043 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-231ENST00000494043 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
MCF2L-231ENST00000494043 PAG1Q9NWQ8 432 aa13.86□□□□□ -0.19
MCF2L-231ENST00000494043 HMG20BQ9P0W2 317 aa13.86□□□□□ -0.19
MCF2L-231ENST00000494043 COL1A1P02452 1464 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-231ENST00000494043 GOLIM4O00461 696 aa13.85□□□□□ -0.19
MCF2L-231ENST00000494043 ZAP70P43403 619 aa13.85□□□□□ -0.19
MCF2L-231ENST00000494043 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
MCF2L-231ENST00000494043 RTKN2Q8IZC4 609 aa13.85□□□□□ -0.19
MCF2L-231ENST00000494043 SPATA5Q8NB90 893 aa13.85□□□□□ -0.19
MCF2L-231ENST00000494043 EYA3Q99504 573 aa13.85□□□□□ -0.19
MCF2L-231ENST00000494043 AKAP11Q9UKA4 1901 aa13.85□□□□□ -0.19
MCF2L-231ENST00000494043 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
MCF2L-231ENST00000494043 RFX7Q2KHR2 1363 aa13.84□□□□□ -0.19
MCF2L-231ENST00000494043 TBC1D9Q6ZT07 1266 aa13.84□□□□□ -0.19
MCF2L-231ENST00000494043 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
MCF2L-231ENST00000494043 PSMD1Q99460 953 aa13.84□□□□□ -0.19
MCF2L-231ENST00000494043 FSD1Q9BTV5 496 aa13.84□□□□□ -0.19
MCF2L-231ENST00000494043 ZC3H12CQ9C0D7 883 aaKnown RBP13.84□□□□□ -0.19
MCF2L-231ENST00000494043 WWC3Q9ULE0 1092 aa13.84□□□□□ -0.19
MCF2L-231ENST00000494043 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
MCF2L-231ENST00000494043 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-231ENST00000494043 TTF1Q15361 905 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-231ENST00000494043 WASHC4Q2M389 1173 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 CASC1Q6TDU7 716 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 KBTBD3Q8NAB2 608 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 TDRD7Q8NHU6 1098 aaKnown RBP13.83□□□□□ -0.2
MCF2L-231ENST00000494043 BACH2Q9BYV9 841 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 CD209Q9NNX6 404 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 AK9Q5TCS8 1911 aa13.83□□□□□ -0.2
MCF2L-231ENST00000494043 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
MCF2L-231ENST00000494043 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-231ENST00000494043 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms