RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 KIF3CO14782 793 aa14.63□□□□□ -0.07
UBA3-211ENST00000493957 KLRK1P26718 216 aa14.63□□□□□ -0.07
UBA3-211ENST00000493957 CHRNDQ07001 517 aa14.63□□□□□ -0.07
UBA3-211ENST00000493957 DZIP1LQ8IYY4 767 aaKnown RBP14.63□□□□□ -0.07
UBA3-211ENST00000493957 MPHOSPH8Q99549 860 aa14.63□□□□□ -0.07
UBA3-211ENST00000493957 GGA1Q9UJY5 639 aa14.63□□□□□ -0.07
UBA3-211ENST00000493957 MYH13Q9UKX3 1938 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 POTECB2RU33 542 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 RFX5P48382 616 aaPredicted RBP14.62□□□□□ -0.07
UBA3-211ENST00000493957 DOK7Q18PE1 504 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 WASHC4Q2M389 1173 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 TAF7LQ5H9L4 462 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 FTSJ3Q8IY81 847 aaKnown RBP14.62□□□□□ -0.07
UBA3-211ENST00000493957 NIM1KQ8IY84 436 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 JDP2Q8WYK2 163 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 DBNDD1Q9H9R9 158 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 RRAGCQ9HB90 399 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 KDM2BQ8NHM5 1336 aa14.62□□□□□ -0.07
UBA3-211ENST00000493957 TAF5LO75529 589 aa14.61□□□□□ -0.07
UBA3-211ENST00000493957 LRRC24Q50LG9 513 aa14.61□□□□□ -0.07
UBA3-211ENST00000493957 TXNRD3Q86VQ6 643 aa14.61□□□□□ -0.07
UBA3-211ENST00000493957 ITPRIPQ8IWB1 547 aa14.61□□□□□ -0.07
UBA3-211ENST00000493957 KCNQ5Q9NR82 932 aa14.61□□□□□ -0.07
UBA3-211ENST00000493957 ATP2B4P23634 1241 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 C20orf194Q5TEA3 1177 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 LDHAL6AQ6ZMR3 332 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 VPS33BQ9H267 617 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 C1orf115Q9H7X2 142 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 CNNM1Q9NRU3 951 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 ZNRF3Q9ULT6 936 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 GJA3Q9Y6H8 435 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 IRS2Q9Y4H2 1338 aa14.6□□□□□ -0.07
UBA3-211ENST00000493957 ECE2O60344 883 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 RAD17O75943 681 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 GNAI3P08754 354 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 ATN1P54259 1190 aaPredicted RBP14.59□□□□□ -0.07
UBA3-211ENST00000493957 PTPN12Q05209 780 aaKnown RBP14.59□□□□□ -0.07
UBA3-211ENST00000493957 CXCL9Q07325 125 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 DPY19L2Q6NUT2 758 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 EYA3Q99504 573 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 PA2G4Q9UQ80 394 aaKnown RBP14.59□□□□□ -0.07
UBA3-211ENST00000493957 POLR2AP24928 1970 aaKnown RBP14.59□□□□□ -0.07
UBA3-211ENST00000493957 ADAMTSL1Q8N6G6 1762 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 MED23Q9ULK4 1368 aa14.59□□□□□ -0.07
UBA3-211ENST00000493957 ARAP2Q8WZ64 1704 aa14.58□□□□□ -0.07
UBA3-211ENST00000493957 EIF6P56537 245 aaKnown RBP14.58□□□□□ -0.08
UBA3-211ENST00000493957 ANKRD2Q9GZV1 360 aa14.58□□□□□ -0.08
UBA3-211ENST00000493957 RIPOR2Q9Y4F9 1068 aa14.58□□□□□ -0.08
UBA3-211ENST00000493957 ZNF804BA4D1E1 1349 aa14.58□□□□□ -0.08
UBA3-211ENST00000493957 ZBTB7BO15156 539 aaPredicted RBP14.57□□□□□ -0.08
UBA3-211ENST00000493957 GPC2Q8N158 579 aa14.57□□□□□ -0.08
UBA3-211ENST00000493957 ZC3H12CQ9C0D7 883 aaKnown RBP14.57□□□□□ -0.08
UBA3-211ENST00000493957 SIL1Q9H173 461 aa14.57□□□□□ -0.08
UBA3-211ENST00000493957 LEMD3Q9Y2U8 911 aa14.57□□□□□ -0.08
UBA3-211ENST00000493957 COG6Q9Y2V7 657 aa14.57□□□□□ -0.08
UBA3-211ENST00000493957 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
UBA3-211ENST00000493957 SHTN1A0MZ66 631 aa14.56□□□□□ -0.08
UBA3-211ENST00000493957 GNAI2P04899 355 aa14.56□□□□□ -0.08
UBA3-211ENST00000493957 CIAPIN1Q6FI81 312 aa14.56□□□□□ -0.08
UBA3-211ENST00000493957 ATG9AQ7Z3C6 839 aa14.56□□□□□ -0.08
UBA3-211ENST00000493957 VGLL2Q8N8G2 317 aa14.56□□□□□ -0.08
UBA3-211ENST00000493957 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
UBA3-211ENST00000493957 PSMD14O00487 310 aa14.55□□□□□ -0.08
UBA3-211ENST00000493957 SRGAP3O43295 1099 aa14.55□□□□□ -0.08
UBA3-211ENST00000493957 VEGFAP15692 232 aaPredicted RBP14.55□□□□□ -0.08
UBA3-211ENST00000493957 KCNJ4P48050 445 aa14.55□□□□□ -0.08
UBA3-211ENST00000493957 SCNN1DP51172 638 aa14.55□□□□□ -0.08
UBA3-211ENST00000493957 MTX1Q13505 466 aa14.55□□□□□ -0.08
UBA3-211ENST00000493957 MVPQ14764 893 aaKnown RBP14.55□□□□□ -0.08
UBA3-211ENST00000493957 EYA2O00167 538 aa14.54□□□□□ -0.08
UBA3-211ENST00000493957 GMPSP49915 693 aaPredicted RBP14.54□□□□□ -0.08
UBA3-211ENST00000493957 METTL24Q5JXM2 366 aa14.54□□□□□ -0.08
UBA3-211ENST00000493957 MROH5Q6ZUA9 1318 aa14.54□□□□□ -0.08
UBA3-211ENST00000493957 G3V3G9 751 aa14.53□□□□□ -0.08
UBA3-211ENST00000493957 EPS15P42566 896 aa14.53□□□□□ -0.08
UBA3-211ENST00000493957 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
UBA3-211ENST00000493957 MXD3Q9BW11 206 aa14.53□□□□□ -0.08
UBA3-211ENST00000493957 TAF1DQ9H5J8 278 aaPredicted RBP14.53□□□□□ -0.08
UBA3-211ENST00000493957 HDAC5Q9UQL6 1122 aa14.53□□□□□ -0.08
UBA3-211ENST00000493957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.53□□□□□ -0.08
UBA3-211ENST00000493957 POTEFA5A3E0 1075 aa14.52□□□□□ -0.09
UBA3-211ENST00000493957 C15orf52Q6ZUT6 534 aaKnown RBP14.52□□□□□ -0.09
UBA3-211ENST00000493957 COPRSQ9NQ92 184 aa14.52□□□□□ -0.09
UBA3-211ENST00000493957 HACL1Q9UJ83 578 aa14.52□□□□□ -0.09
UBA3-211ENST00000493957 CIAO1O76071 339 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 PDE8BO95263 885 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 MS4A1P11836 297 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 EPHX2P34913 555 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 GYG1P46976 350 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 RRP1P56182 461 aaKnown RBP14.51□□□□□ -0.09
UBA3-211ENST00000493957 C1QTNF8P60827 252 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 ATP8B2P98198 1209 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 UBE4AQ14139 1066 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 TNIP1Q15025 636 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 C16orf71Q8IYS4 520 aaPredicted RBP14.51□□□□□ -0.09
UBA3-211ENST00000493957 COA1Q9GZY4 146 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 GPRC5DQ9NZD1 345 aa14.51□□□□□ -0.09
UBA3-211ENST00000493957 IQCA1LA6NCM1 817 aa14.5□□□□□ -0.09
UBA3-211ENST00000493957 TOMM70O94826 608 aa14.5□□□□□ -0.09
UBA3-211ENST00000493957 VIL1P09327 827 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms