RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 PI4KAP1Q8N8J0 262 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 GMLQ99445 158 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 STK31Q9BXU1 1019 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 SAGE1Q9NXZ1 904 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 PITPNM2Q9BZ72 1349 aa10.03□□□□□ -0.8
SEMA3F-209ENST00000493743 LAMB1P07942 1786 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 USP17L3A6NCW0 530 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 USP17L4A6NCW7 530 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 SLC10A3P09131 477 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 RGS19P49795 217 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 KIF23Q02241 960 aaPredicted RBP10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 DGKZQ13574 1117 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 SCARF1Q14162 830 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 TSR2Q969E8 191 aaKnown RBP10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 MYOZ2Q9NPC6 264 aa10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 BSDC1Q9NW68 430 aaPredicted RBP10.02□□□□□ -0.81
SEMA3F-209ENST00000493743 NEURL1BA8MQ27 555 aa10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 NEFLP07196 543 aa10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 CCT4P50991 539 aaKnown RBP10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 FKBP1BP68106 108 aa10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 CCDC27Q2M243 656 aa10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 CWF19L2Q2TBE0 894 aaKnown RBP10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 TWISTNBQ3B726 338 aaPredicted RBP10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 REM2Q8IYK8 340 aaPredicted RBP10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 GREM2Q9H772 168 aa10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 MINPP1Q9UNW1 487 aa10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 MYO3BQ8WXR4 1341 aa10.01□□□□□ -0.81
SEMA3F-209ENST00000493743 TRPA1O75762 1119 aa10□□□□□ -0.81
SEMA3F-209ENST00000493743 IGHMBP2P38935 993 aaKnown RBP10□□□□□ -0.81
SEMA3F-209ENST00000493743 UBE3BQ7Z3V4 1068 aa10□□□□□ -0.81
SEMA3F-209ENST00000493743 RASAL3Q86YV0 1011 aa10□□□□□ -0.81
SEMA3F-209ENST00000493743 WWC1Q8IX03 1113 aa10□□□□□ -0.81
SEMA3F-209ENST00000493743 GTF3C3Q9Y5Q9 886 aa10□□□□□ -0.81
SEMA3F-209ENST00000493743 WTIPA6NIX2 430 aaPredicted RBP9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 H7C1W4 665 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 DACT2Q5SW24 774 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 STRIP1Q5VSL9 837 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 G2E3Q7L622 706 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 OGFOD1Q8N543 542 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 CSRNP1Q96S65 589 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 PLA2G12BQ9BX93 195 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 COA1Q9GZY4 146 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 RNF186Q9NXI6 227 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 LEMD3Q9Y2U8 911 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 IL16Q14005 1332 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 ARAP2Q8WZ64 1704 aa9.99□□□□□ -0.81
SEMA3F-209ENST00000493743 ITGA6P23229 1130 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 MMP14P50281 582 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 FLIIQ13045 1269 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 GCKRQ14397 625 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 NBPF9Q3BBW0 867 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 CCDC184Q52MB2 194 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 MPHOSPH8Q99549 860 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 ANKRD2Q9GZV1 360 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 ZNF804BA4D1E1 1349 aa9.98□□□□□ -0.81
SEMA3F-209ENST00000493743 WNT10BO00744 389 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 NF2P35240 595 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 CASP7P55210 303 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 FKBP5Q13451 457 aaPredicted RBP9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 TTLL12Q14166 644 aaPredicted RBP9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 TXNRD3Q86VQ6 643 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 LINS1Q8NG48 757 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 DNAAF4Q8WXU2 420 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 MXD3Q9BW11 206 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 HDAC9Q9UKV0 1011 aa9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 SCAF8Q9UPN6 1271 aaKnown RBP9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 COL1A1P02452 1464 aaPredicted RBP9.97□□□□□ -0.81
SEMA3F-209ENST00000493743 UBE2Q2LH0YL09 131 aa9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 SASH1O94885 1247 aa9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 CSF1RP07333 972 aa9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 KCNJ4P48050 445 aa9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 TTLL5Q6EMB2 1281 aa9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 MOB2Q70IA6 237 aa9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 APOBEC3FQ8IUX4 373 aaKnown RBP9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.82
SEMA3F-209ENST00000493743 OTOFQ9HC10 1997 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 ANKRD18BA2A2Z9 1011 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 KLRK1P26718 216 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 GTF2IP78347 998 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 CHRNDQ07001 517 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 PRAMEF18Q5VWM3 479 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 CTU1Q7Z7A3 348 aaKnown RBP9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 KIAA0825Q8IV33 1275 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 MYH13Q9UKX3 1938 aa9.95□□□□□ -0.82
SEMA3F-209ENST00000493743 PDIA4P13667 645 aaKnown RBP9.94□□□□□ -0.82
SEMA3F-209ENST00000493743 ARMC9Q7Z3E5 817 aa9.94□□□□□ -0.82
SEMA3F-209ENST00000493743 PDE4DIPQ5VU43 2346 aa9.94□□□□□ -0.82
SEMA3F-209ENST00000493743 VAMP4O75379 141 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 SLC34A2O95436 690 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 TM4SF4P48230 202 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 SREBF2Q12772 1141 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 IFIT5Q13325 482 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms