RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 USP5P45974 858 aa8.42□□□□□ -1.06
SORT1-207ENST00000493736 CEP120Q8N960 986 aa8.42□□□□□ -1.06
SORT1-207ENST00000493736 WFDC12Q8WWY7 111 aa8.42□□□□□ -1.06
SORT1-207ENST00000493736 PMEPA1Q969W9 287 aa8.42□□□□□ -1.06
SORT1-207ENST00000493736 WIZO95785 1651 aa8.42□□□□□ -1.06
SORT1-207ENST00000493736 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
SORT1-207ENST00000493736 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
SORT1-207ENST00000493736 EHHADHQ08426 723 aa8.41□□□□□ -1.06
SORT1-207ENST00000493736 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
SORT1-207ENST00000493736 TP53INP1Q96A56 240 aa8.41□□□□□ -1.06
SORT1-207ENST00000493736 SALL4Q9UJQ4 1053 aa8.41□□□□□ -1.06
SORT1-207ENST00000493736 ATAD2BQ9ULI0 1458 aa8.4□□□□□ -1.06
SORT1-207ENST00000493736 DYRK3O43781 588 aa8.4□□□□□ -1.06
SORT1-207ENST00000493736 PTPRAP18433 802 aa8.4□□□□□ -1.06
SORT1-207ENST00000493736 CDC25BP30305 580 aa8.4□□□□□ -1.06
SORT1-207ENST00000493736 FAM117BQ6P1L5 589 aa8.4□□□□□ -1.06
SORT1-207ENST00000493736 MRPL18Q9H0U6 180 aaKnown RBP8.4□□□□□ -1.06
SORT1-207ENST00000493736 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
SORT1-207ENST00000493736 PEG3Q9GZU2 1588 aa8.39□□□□□ -1.07
SORT1-207ENST00000493736 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
SORT1-207ENST00000493736 FZD6O60353 706 aa8.39□□□□□ -1.07
SORT1-207ENST00000493736 PHACTR2O75167 634 aa8.39□□□□□ -1.07
SORT1-207ENST00000493736 NOS3P29474 1203 aa8.39□□□□□ -1.07
SORT1-207ENST00000493736 PDE4CQ08493 712 aa8.39□□□□□ -1.07
SORT1-207ENST00000493736 TXNDC11Q6PKC3 985 aa8.39□□□□□ -1.07
SORT1-207ENST00000493736 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
SORT1-207ENST00000493736 H3BRB1 525 aa8.38□□□□□ -1.07
SORT1-207ENST00000493736 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
SORT1-207ENST00000493736 RETREG2Q8NC44 543 aa8.38□□□□□ -1.07
SORT1-207ENST00000493736 SNX29Q8TEQ0 813 aa8.38□□□□□ -1.07
SORT1-207ENST00000493736 POP1Q99575 1024 aaKnown RBP8.38□□□□□ -1.07
SORT1-207ENST00000493736 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
SORT1-207ENST00000493736 TUT1Q9H6E5 874 aaKnown RBP8.38□□□□□ -1.07
SORT1-207ENST00000493736 AKTIPQ9H8T0 292 aa8.38□□□□□ -1.07
SORT1-207ENST00000493736 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
SORT1-207ENST00000493736 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.38□□□□□ -1.07
SORT1-207ENST00000493736 TOP2AP11388 1531 aaKnown RBP8.38□□□□□ -1.07
SORT1-207ENST00000493736 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 ICMTO60725 284 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 H2AFB1P0C5Y9 115 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 H2AFB2P0C5Z0 115 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 ACPPP15309 386 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 ITGB7P26010 798 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 SERPINB4P48594 390 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 CABP4P57796 275 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 GLYCTKQ8IVS8 523 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
SORT1-207ENST00000493736 DZANK1Q9NVP4 752 aa8.37□□□□□ -1.07
SORT1-207ENST00000493736 EREGO14944 169 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 EPHA1P21709 976 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 ADAMTSL4Q6UY14 1074 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 GJD3Q8N144 294 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 TMEM130Q8N3G9 435 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 GALNT11Q8NCW6 608 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 SSBP4Q9BWG4 385 aaPredicted RBP8.36□□□□□ -1.07
SORT1-207ENST00000493736 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 ADAM19Q9H013 955 aa8.36□□□□□ -1.07
SORT1-207ENST00000493736 FOXD3Q9UJU5 478 aaPredicted RBP8.36□□□□□ -1.07
SORT1-207ENST00000493736 HMGXB3Q12766 1538 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 NCAPD3P42695 1498 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 F8W735 103 aaPredicted RBP8.35□□□□□ -1.07
SORT1-207ENST00000493736 PDE2AO00408 941 aaPredicted RBP8.35□□□□□ -1.07
SORT1-207ENST00000493736 FSCN2O14926 492 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 TRPA1O75762 1119 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 ALX3O95076 343 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 EDN3P14138 238 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 CD68P34810 354 aaPredicted RBP8.35□□□□□ -1.07
SORT1-207ENST00000493736 KLHL23Q8NBE8 558 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 MEGF10Q96KG7 1140 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 BRPF3Q9ULD4 1205 aa8.35□□□□□ -1.07
SORT1-207ENST00000493736 H3BRJ5 948 aa8.34□□□□□ -1.07
SORT1-207ENST00000493736 NFKBIEO00221 500 aa8.34□□□□□ -1.07
SORT1-207ENST00000493736 PRSS36Q5K4E3 855 aa8.34□□□□□ -1.07
SORT1-207ENST00000493736 OSMRQ99650 979 aa8.34□□□□□ -1.07
SORT1-207ENST00000493736 AMOTL2Q9Y2J4 779 aa8.34□□□□□ -1.07
SORT1-207ENST00000493736 FOXD4L6Q3SYB3 417 aaPredicted RBP8.33□□□□□ -1.08
SORT1-207ENST00000493736 ZMYM1Q5SVZ6 1142 aa8.33□□□□□ -1.08
SORT1-207ENST00000493736 FOXD4L3Q6VB84 417 aaPredicted RBP8.33□□□□□ -1.08
SORT1-207ENST00000493736 AGGF1Q8N302 714 aaeCLIP8.33□□□□□ -1.081e-9■■□□□ 14
SORT1-207ENST00000493736 TMEM102Q8N9M5 508 aaPredicted RBP8.33□□□□□ -1.08
SORT1-207ENST00000493736 HHIPQ96QV1 700 aa8.33□□□□□ -1.08
SORT1-207ENST00000493736 SEC31BQ9NQW1 1179 aa8.33□□□□□ -1.08
SORT1-207ENST00000493736 NDUFB5O43674 189 aa8.32□□□□□ -1.08
SORT1-207ENST00000493736 GLB1P16278 677 aa8.32□□□□□ -1.08
SORT1-207ENST00000493736 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
SORT1-207ENST00000493736 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
SORT1-207ENST00000493736 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.32□□□□□ -1.08
SORT1-207ENST00000493736 ZKSCAN3Q9BRR0 538 aa8.32□□□□□ -1.08
SORT1-207ENST00000493736 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
SORT1-207ENST00000493736 DZIP1LQ8IYY4 767 aaKnown RBP8.31□□□□□ -1.08
SORT1-207ENST00000493736 CCER1Q8TC90 406 aaPredicted RBP8.31□□□□□ -1.08
SORT1-207ENST00000493736 SLC7A3Q8WY07 619 aa8.31□□□□□ -1.08
SORT1-207ENST00000493736 WNT8BQ93098 351 aa8.31□□□□□ -1.08
SORT1-207ENST00000493736 ZFYVE28Q9HCC9 887 aa8.31□□□□□ -1.08
SORT1-207ENST00000493736 OSGEPQ9NPF4 335 aa8.31□□□□□ -1.08
SORT1-207ENST00000493736 KCNK4Q9NYG8 393 aa8.31□□□□□ -1.08
SORT1-207ENST00000493736 WISP1O95388 367 aa8.3□□□□□ -1.08
SORT1-207ENST00000493736 ARL4DP49703 201 aa8.3□□□□□ -1.08
SORT1-207ENST00000493736 DUOXA2Q1HG44 320 aa8.3□□□□□ -1.08
SORT1-207ENST00000493736 BSNDQ8WZ55 320 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms