RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ATRIPQ8WXE1 791 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 CCDC121Q6ZUS5 278 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 DCTPP1Q9H773 170 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
RNF40-203ENST00000493683 C8orf34Q49A92 452 aa22.8■■□□□ 1.24
RNF40-203ENST00000493683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.8■■□□□ 1.24
RNF40-203ENST00000493683 CNGA4Q8IV77 575 aa22.8■■□□□ 1.24
RNF40-203ENST00000493683 SYNCQ9H7C4 482 aa22.8■■□□□ 1.24
RNF40-203ENST00000493683 FAM83GA6ND36 823 aa22.8■■□□□ 1.24
RNF40-203ENST00000493683 NGLY1Q96IV0 654 aa22.8■■□□□ 1.24
RNF40-203ENST00000493683 NAP1L4Q99733 375 aaKnown RBP22.8■■□□□ 1.24
RNF40-203ENST00000493683 CCDC94Q9BW85 323 aaPredicted RBP22.8■■□□□ 1.24
RNF40-203ENST00000493683 SSX2IPQ9Y2D8 614 aa22.8■■□□□ 1.24
RNF40-203ENST00000493683 ACEP12821 1306 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 VAV2P52735 878 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 V9GYY5 206 aaPredicted RBP22.79■■□□□ 1.24
RNF40-203ENST00000493683 SMC6Q96SB8 1091 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 ZHX1Q9UKY1 873 aaPredicted RBP22.79■■□□□ 1.24
RNF40-203ENST00000493683 MAPK8IP2Q13387 824 aaPredicted RBP22.79■■□□□ 1.24
RNF40-203ENST00000493683 KRT79Q5XKE5 535 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 GPATCH11Q8N954 259 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 IPO4Q8TEX9 1081 aaKnown RBP22.79■■□□□ 1.24
RNF40-203ENST00000493683 ZNF830Q96NB3 372 aaPredicted RBP22.79■■□□□ 1.24
RNF40-203ENST00000493683 CAPN2P17655 700 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 IMPG2Q9BZV3 1241 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 CHPF2Q9P2E5 772 aa22.79■■□□□ 1.24
RNF40-203ENST00000493683 KRT2P35908 639 aa22.78■■□□□ 1.24
RNF40-203ENST00000493683 TNNC1P63316 161 aa22.78■■□□□ 1.24
RNF40-203ENST00000493683 WDR78Q5VTH9 848 aa22.78■■□□□ 1.24
RNF40-203ENST00000493683 RAB11FIP4Q86YS3 637 aa22.78■■□□□ 1.24
RNF40-203ENST00000493683 NEK11Q8NG66 645 aa22.78■■□□□ 1.24
RNF40-203ENST00000493683 PAG1Q9NWQ8 432 aa22.78■■□□□ 1.24
RNF40-203ENST00000493683 PRIM1P49642 420 aaKnown RBP22.78■■□□□ 1.24
RNF40-203ENST00000493683 UTP14AQ9BVJ6 771 aaKnown RBP22.78■■□□□ 1.24
RNF40-203ENST00000493683 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.78■■□□□ 1.24
RNF40-203ENST00000493683 CADPS2Q86UW7 1296 aa22.78■■□□□ 1.24
RNF40-203ENST00000493683 MTRF1LQ9UGC7 380 aaKnown RBP22.78■■□□□ 1.24
RNF40-203ENST00000493683 ADAMTS2O95450 1211 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 NAPAP54920 295 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 AKAP4Q5JQC9 854 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 HEATR3Q7Z4Q2 680 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 JAKMIP2Q96AA8 810 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 MMRN2Q9H8L6 949 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 RNF113AO15541 343 aaKnown RBP22.77■■□□□ 1.24
RNF40-203ENST00000493683 ST5P78524 1137 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 NMIQ13287 307 aaPredicted RBP22.77■■□□□ 1.24
RNF40-203ENST00000493683 TTLL12Q14166 644 aaPredicted RBP22.77■■□□□ 1.24
RNF40-203ENST00000493683 LINS1Q8NG48 757 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 PARD3Q8TEW0 1356 aa22.77■■□□□ 1.24
RNF40-203ENST00000493683 NAA16Q6N069 864 aaPredicted RBP22.77■■□□□ 1.23
RNF40-203ENST00000493683 DHX58Q96C10 678 aa22.77■■□□□ 1.23
RNF40-203ENST00000493683 DRC1Q96MC2 740 aa22.77■■□□□ 1.23
RNF40-203ENST00000493683 GTF2A1P52655 376 aaPredicted RBP22.76■■□□□ 1.23
RNF40-203ENST00000493683 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
RNF40-203ENST00000493683 MARCKSP29966 332 aaPredicted RBP22.76■■□□□ 1.23
RNF40-203ENST00000493683 MXRA7P84157 204 aa22.76■■□□□ 1.23
RNF40-203ENST00000493683 KIAA1524Q8TCG1 905 aa22.76■■□□□ 1.23
RNF40-203ENST00000493683 TRIM14Q14142 442 aa22.76■■□□□ 1.23
RNF40-203ENST00000493683 DHX32Q7L7V1 743 aaKnown RBP22.76■■□□□ 1.23
RNF40-203ENST00000493683 MSANTD4Q8NCY6 345 aa22.76■■□□□ 1.23
RNF40-203ENST00000493683 XAGE3Q8WTP9 111 aa22.76■■□□□ 1.23
RNF40-203ENST00000493683 OGFRQ9NZT2 677 aa22.76■■□□□ 1.23
RNF40-203ENST00000493683 PHACTR2O75167 634 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 PLCG2P16885 1265 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 LMOD1P29536 600 aaPredicted RBP22.75■■□□□ 1.23
RNF40-203ENST00000493683 SLC9C2Q5TAH2 1124 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 IQUBQ8NA54 791 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 RUFY3Q7L099 469 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 LUC7L2Q9Y383 392 aaKnown RBP22.75■■□□□ 1.23
RNF40-203ENST00000493683 A6NNZ2 444 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 GNA11P29992 359 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 TUBB8Q3ZCM7 444 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 CEP128Q6ZU80 1094 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 HS2ST1Q7LGA3 356 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 OTUD6BQ8N6M0 293 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 CFAP57Q96MR6 1250 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 RNF216Q9NWF9 866 aaPredicted RBP22.75■■□□□ 1.23
RNF40-203ENST00000493683 ATP2A2P16615 1042 aaKnown RBP22.75■■□□□ 1.23
RNF40-203ENST00000493683 HDXQ7Z353 690 aa22.75■■□□□ 1.23
RNF40-203ENST00000493683 RBM28Q9NW13 759 aaKnown RBP22.75■■□□□ 1.23
RNF40-203ENST00000493683 AK2P54819 239 aa22.74■■□□□ 1.23
RNF40-203ENST00000493683 PLB1Q6P1J6 1458 aa22.74■■□□□ 1.23
RNF40-203ENST00000493683 UBXN1Q04323 297 aa22.74■■□□□ 1.23
RNF40-203ENST00000493683 CREB3L3Q68CJ9 461 aa22.74■■□□□ 1.23
RNF40-203ENST00000493683 RRP36Q96EU6 259 aaKnown RBP22.74■■□□□ 1.23
RNF40-203ENST00000493683 ELP1O95163 1332 aa22.73■■□□□ 1.23
RNF40-203ENST00000493683 LRRC2Q9BYS8 371 aa22.73■■□□□ 1.23
RNF40-203ENST00000493683 CHMP4BP1P59074 171 aa22.73■■□□□ 1.23
RNF40-203ENST00000493683 MYL5Q02045 173 aa22.73■■□□□ 1.23
RNF40-203ENST00000493683 LMBR1LQ6UX01 489 aa22.73■■□□□ 1.23
RNF40-203ENST00000493683 DENND4BO75064 1496 aaPredicted RBP22.73■■□□□ 1.23
RNF40-203ENST00000493683 MTUS1Q9ULD2 1270 aa22.73■■□□□ 1.23
RNF40-203ENST00000493683 MRVI1Q9Y6F6 885 aa22.73■■□□□ 1.23
RNF40-203ENST00000493683 MAGEB6P1A0A0J9YX57 407 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 B4DLN1 442 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 PTGS1P23219 599 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 MRPL12P52815 198 aaKnown RBP22.72■■□□□ 1.23
RNF40-203ENST00000493683 SMARCC2Q8TAQ2 1214 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 PTPDC1A2A3K4 754 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 ATP2C2O75185 946 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms