RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TTLL11Q8NHH1 800 aa27.65■■■□□ 2.02
PFDN4-205ENST00000493356 CHMP4AQ9BY43 222 aa27.65■■■□□ 2.02
PFDN4-205ENST00000493356 BSDC1Q9NW68 430 aaPredicted RBP27.65■■■□□ 2.02
PFDN4-205ENST00000493356 MINPP1Q9UNW1 487 aa27.65■■■□□ 2.02
PFDN4-205ENST00000493356 DACT2Q5SW24 774 aa27.64■■■□□ 2.02
PFDN4-205ENST00000493356 GREM2Q9H772 168 aa27.64■■■□□ 2.02
PFDN4-205ENST00000493356 PRKRIP1Q9H875 184 aaPredicted RBP27.64■■■□□ 2.02
PFDN4-205ENST00000493356 PI4KAP2A4QPH2 592 aa27.63■■■□□ 2.01
PFDN4-205ENST00000493356 UBE2Q2LH0YL09 131 aa27.63■■■□□ 2.01
PFDN4-205ENST00000493356 PRAMEF18Q5VWM3 479 aa27.63■■■□□ 2.01
PFDN4-205ENST00000493356 KSR2Q6VAB6 950 aa27.63■■■□□ 2.01
PFDN4-205ENST00000493356 TSPYL6Q8N831 410 aa27.63■■■□□ 2.01
PFDN4-205ENST00000493356 PI4KAP1Q8N8J0 262 aa27.63■■■□□ 2.01
PFDN4-205ENST00000493356 MXD3Q9BW11 206 aa27.63■■■□□ 2.01
PFDN4-205ENST00000493356 CCT4P50991 539 aaKnown RBP27.62■■■□□ 2.01
PFDN4-205ENST00000493356 OGFOD1Q8N543 542 aa27.61■■■□□ 2.01
PFDN4-205ENST00000493356 WNT10BO00744 389 aa27.6■■■□□ 2.01
PFDN4-205ENST00000493356 MYO3BQ8WXR4 1341 aa27.6■■■□□ 2.01
PFDN4-205ENST00000493356 NEXNQ0ZGT2 675 aa27.59■■■□□ 2.01
PFDN4-205ENST00000493356 CWF19L2Q2TBE0 894 aaKnown RBP27.59■■■□□ 2.01
PFDN4-205ENST00000493356 STRIP1Q5VSL9 837 aa27.59■■■□□ 2.01
PFDN4-205ENST00000493356 FBXW7Q969H0 707 aa27.59■■■□□ 2.01
PFDN4-205ENST00000493356 COA1Q9GZY4 146 aa27.59■■■□□ 2.01
PFDN4-205ENST00000493356 TTLL12Q14166 644 aaPredicted RBP27.58■■■□□ 2.01
PFDN4-205ENST00000493356 TXNRD3Q86VQ6 643 aa27.58■■■□□ 2.01
PFDN4-205ENST00000493356 NEURL1BA8MQ27 555 aa27.57■■■□□ 2
PFDN4-205ENST00000493356 TBC1D8O95759 1140 aa27.57■■■□□ 2
PFDN4-205ENST00000493356 ZNF296Q8WUU4 475 aaPredicted RBP27.57■■■□□ 2
PFDN4-205ENST00000493356 HPS5Q9UPZ3 1129 aa27.57■■■□□ 2
PFDN4-205ENST00000493356 SASH1O94885 1247 aa27.56■■■□□ 2
PFDN4-205ENST00000493356 NF2P35240 595 aa27.56■■■□□ 2
PFDN4-205ENST00000493356 TM4SF4P48230 202 aa27.56■■■□□ 2
PFDN4-205ENST00000493356 HDAC9Q9UKV0 1011 aa27.56■■■□□ 2
PFDN4-205ENST00000493356 LEMD3Q9Y2U8 911 aa27.56■■■□□ 2
PFDN4-205ENST00000493356 H7C1W4 665 aa27.55■■■□□ 2
PFDN4-205ENST00000493356 PKN2Q16513 984 aaKnown RBP27.55■■■□□ 2
PFDN4-205ENST00000493356 UBE3BQ7Z3V4 1068 aa27.55■■■□□ 2
PFDN4-205ENST00000493356 TSR2Q969E8 191 aaKnown RBP27.55■■■□□ 2
PFDN4-205ENST00000493356 STK31Q9BXU1 1019 aa27.55■■■□□ 2
PFDN4-205ENST00000493356 IGHMBP2P38935 993 aaKnown RBP27.54■■■□□ 2
PFDN4-205ENST00000493356 MMP14P50281 582 aa27.54■■■□□ 2
PFDN4-205ENST00000493356 ZNF804BA4D1E1 1349 aa27.53■■■□□ 2
PFDN4-205ENST00000493356 KLRK1P26718 216 aa27.53■■■□□ 2
PFDN4-205ENST00000493356 TTLL5Q6EMB2 1281 aa27.53■■■□□ 2
PFDN4-205ENST00000493356 G2E3Q7L622 706 aa27.53■■■□□ 2
PFDN4-205ENST00000493356 MKRN3Q13064 507 aaKnown RBP27.52■■■□□ 2
PFDN4-205ENST00000493356 NOM1Q5C9Z4 860 aaKnown RBP27.52■■■□□ 2
PFDN4-205ENST00000493356 GPR25O00155 361 aa27.51■■□□□ 1.99
PFDN4-205ENST00000493356 ITGA6P23229 1130 aa27.51■■□□□ 1.99
PFDN4-205ENST00000493356 PTPN12Q05209 780 aaKnown RBP27.51■■□□□ 1.99
PFDN4-205ENST00000493356 APOBEC3FQ8IUX4 373 aaKnown RBP27.51■■□□□ 1.99
PFDN4-205ENST00000493356 KIAA0825Q8IV33 1275 aa27.51■■□□□ 1.99
PFDN4-205ENST00000493356 PLA2G12BQ9BX93 195 aa27.51■■□□□ 1.99
PFDN4-205ENST00000493356 ANKRD2Q9GZV1 360 aa27.51■■□□□ 1.99
PFDN4-205ENST00000493356 ZBED3Q96IU2 234 aaPredicted RBP27.5■■□□□ 1.99
PFDN4-205ENST00000493356 PCDH10Q9P2E7 1040 aa27.5■■□□□ 1.99
PFDN4-205ENST00000493356 SREBF2Q12772 1141 aa27.49■■□□□ 1.99
PFDN4-205ENST00000493356 PRKG1Q13976 671 aa27.49■■□□□ 1.99
PFDN4-205ENST00000493356 GCKRQ14397 625 aa27.49■■□□□ 1.99
PFDN4-205ENST00000493356 ARMC9Q7Z3E5 817 aa27.49■■□□□ 1.99
PFDN4-205ENST00000493356 MPHOSPH8Q99549 860 aa27.49■■□□□ 1.99
PFDN4-205ENST00000493356 SLC4A2P04920 1241 aa27.48■■□□□ 1.99
PFDN4-205ENST00000493356 CASP7P55210 303 aa27.48■■□□□ 1.99
PFDN4-205ENST00000493356 GTF2IP78347 998 aa27.48■■□□□ 1.99
PFDN4-205ENST00000493356 TWISTNBQ3B726 338 aaPredicted RBP27.48■■□□□ 1.99
PFDN4-205ENST00000493356 CFHR5Q9BXR6 569 aa27.48■■□□□ 1.99
PFDN4-205ENST00000493356 CSF1RP07333 972 aa27.47■■□□□ 1.99
PFDN4-205ENST00000493356 LDLRAD1Q5T700 205 aa27.47■■□□□ 1.99
PFDN4-205ENST00000493356 PRPF38BQ5VTL8 546 aaKnown RBP27.46■■□□□ 1.99
PFDN4-205ENST00000493356 COL1A1P02452 1464 aaPredicted RBP27.45■■□□□ 1.99
PFDN4-205ENST00000493356 KCNJ4P48050 445 aa27.45■■□□□ 1.98
PFDN4-205ENST00000493356 CHRNDQ07001 517 aa27.45■■□□□ 1.98
PFDN4-205ENST00000493356 SPRYD7Q5W111 196 aa27.45■■□□□ 1.98
PFDN4-205ENST00000493356 FBXO46Q6PJ61 603 aaPredicted RBP27.45■■□□□ 1.98
PFDN4-205ENST00000493356 R3HDMLQ9H3Y0 253 aa27.45■■□□□ 1.98
PFDN4-205ENST00000493356 CD209Q9NNX6 404 aa27.45■■□□□ 1.98
PFDN4-205ENST00000493356 ANGEL1Q9UNK9 670 aaKnown RBP27.45■■□□□ 1.98
PFDN4-205ENST00000493356 FLIIQ13045 1269 aa27.44■■□□□ 1.98
PFDN4-205ENST00000493356 CCDC27Q2M243 656 aa27.44■■□□□ 1.98
PFDN4-205ENST00000493356 MYH16Q9H6N6 1097 aa27.44■■□□□ 1.98
PFDN4-205ENST00000493356 FZD1Q9UP38 647 aa27.44■■□□□ 1.98
PFDN4-205ENST00000493356 ECM29Q5VYK3 1845 aa27.44■■□□□ 1.98
PFDN4-205ENST00000493356 A0A1B0GUL6 1792 aa27.43■■□□□ 1.98
PFDN4-205ENST00000493356 FKTNO75072 461 aa27.43■■□□□ 1.98
PFDN4-205ENST00000493356 WWC1Q8IX03 1113 aa27.43■■□□□ 1.98
PFDN4-205ENST00000493356 DEFB129Q9H1M3 183 aa27.43■■□□□ 1.98
PFDN4-205ENST00000493356 IRS2Q9Y4H2 1338 aa27.42■■□□□ 1.98
PFDN4-205ENST00000493356 DLGAP5Q15398 846 aa27.42■■□□□ 1.98
PFDN4-205ENST00000493356 CERS5Q8N5B7 392 aa27.42■■□□□ 1.98
PFDN4-205ENST00000493356 LINS1Q8NG48 757 aa27.42■■□□□ 1.98
PFDN4-205ENST00000493356 DNAAF4Q8WXU2 420 aa27.42■■□□□ 1.98
PFDN4-205ENST00000493356 CACNA1FO60840 1977 aa27.42■■□□□ 1.98
PFDN4-205ENST00000493356 SSC5DA1L4H1 1573 aa27.41■■□□□ 1.98
PFDN4-205ENST00000493356 SNAP23O00161 211 aa27.41■■□□□ 1.98
PFDN4-205ENST00000493356 FKBP5Q13451 457 aaPredicted RBP27.41■■□□□ 1.98
PFDN4-205ENST00000493356 MTMR14Q8NCE2 650 aa27.41■■□□□ 1.98
PFDN4-205ENST00000493356 LAMB1P07942 1786 aa27.4■■□□□ 1.98
PFDN4-205ENST00000493356 ANKRD18BA2A2Z9 1011 aa27.4■■□□□ 1.98
PFDN4-205ENST00000493356 TAF5LO75529 589 aa27.39■■□□□ 1.98
PFDN4-205ENST00000493356 ALDH1A1P00352 501 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms