RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 PRPF40BQ6NWY9 871 aaKnown RBP6.47□□□□□ -1.37
NEK4-205ENST00000493199 PODNQ7Z5L7 613 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 AMIGO3Q86WK7 504 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 SIRT2Q8IXJ6 389 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 SYNE4Q8N205 404 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 CCDC24Q8N4L8 307 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 WDR66Q8TBY9 1149 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 CELF1Q92879 486 aaKnown RBP6.47□□□□□ -1.37
NEK4-205ENST00000493199 DDRGK1Q96HY6 314 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 ZNF594Q96JF6 807 aaPredicted RBP6.47□□□□□ -1.37
NEK4-205ENST00000493199 ZNF512BQ96KM6 892 aaPredicted RBP6.47□□□□□ -1.37
NEK4-205ENST00000493199 COA1Q9GZY4 146 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 IL1RAPL2Q9NP60 686 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 SEC31BQ9NQW1 1179 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 PA2G4Q9UQ80 394 aaKnown RBP6.47□□□□□ -1.37
NEK4-205ENST00000493199 BCS1LQ9Y276 419 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 TUBGCP6Q96RT7 1819 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 A0A0G2JLW4 131 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 UFL1O94874 794 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 ZFYP08048 801 aaPredicted RBP6.46□□□□□ -1.38
NEK4-205ENST00000493199 DPEP1P16444 411 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 ATP5JP18859 108 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 RGS3P49796 1198 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 GSTO1P78417 241 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 MAP3K12Q12852 859 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 TNIP1Q15025 636 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 LRRC24Q50LG9 513 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 DPY19L2Q6NUT2 758 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 KIAA1211Q6ZU35 1233 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 EVI5LQ96CN4 794 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 XAGE2Q96GT9 111 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 PSMD1Q99460 953 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 CCDC8Q9H0W5 538 aaPredicted RBP6.46□□□□□ -1.38
NEK4-205ENST00000493199 OSBPL3Q9H4L5 887 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 MAST3O60307 1309 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 KDM2BQ8NHM5 1336 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 MYO3BQ8WXR4 1341 aa6.46□□□□□ -1.38
NEK4-205ENST00000493199 CEP350Q5VT06 3117 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 C10orf71Q711Q0 1435 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 GOLGB1Q14789 3259 aaKnown RBP6.45□□□□□ -1.38
NEK4-205ENST00000493199 LAMB2P55268 1798 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 ZBTB22O15209 634 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 C21orf2O43822 256 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 SASH1O94885 1247 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 PDE1AP54750 535 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 EIF6P56537 245 aaKnown RBP6.45□□□□□ -1.38
NEK4-205ENST00000493199 TIMM10P62072 90 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 FKBP4Q02790 459 aaKnown RBP eCLIP6.45□□□□□ -1.38
NEK4-205ENST00000493199 BMP2KLQ5H9B9 411 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 C15orf52Q6ZUT6 534 aaKnown RBP6.45□□□□□ -1.38
NEK4-205ENST00000493199 ATG9AQ7Z3C6 839 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 AMOTL1Q8IY63 956 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 NIM1KQ8IY84 436 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 OGFOD1Q8N543 542 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 IL27Q8NEV9 243 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 KLHDC4Q8TBB5 520 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 RILPL2Q969X0 211 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 TAOK3Q9H2K8 898 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 DIAPH3Q9NSV4 1193 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 LRP2BPQ9P2M1 347 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 STAP2Q9UGK3 403 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 HDAC9Q9UKV0 1011 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 SUGT1Q9Y2Z0 365 aa6.45□□□□□ -1.38
NEK4-205ENST00000493199 MED23Q9ULK4 1368 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 TAF5LO75529 589 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 REC8O95072 547 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 BAG3O95817 575 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 MCCP23508 829 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 CHRNA5P30532 468 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 CCDC102BQ68D86 513 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 ARHGAP27Q6ZUM4 889 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 LARGE2Q8N3Y3 721 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 NLGN2Q8NFZ4 835 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 HELBQ8NG08 1087 aaPredicted RBP6.44□□□□□ -1.38
NEK4-205ENST00000493199 TBC1D16Q8TBP0 767 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 EAF2Q96CJ1 260 aaPredicted RBP6.44□□□□□ -1.38
NEK4-205ENST00000493199 PUS3Q9BZE2 481 aaKnown RBP6.44□□□□□ -1.38
NEK4-205ENST00000493199 NRXN2Q9P2S2 1712 aa6.44□□□□□ -1.38
NEK4-205ENST00000493199 PDS5AQ29RF7 1337 aaKnown RBP6.44□□□□□ -1.38
NEK4-205ENST00000493199 MYO1BO43795 1136 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 MAP4K4O95819 1239 aaPredicted RBP6.43□□□□□ -1.38
NEK4-205ENST00000493199 PLCG2P16885 1265 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 YBX3P16989 372 aaKnown RBP eCLIP6.43□□□□□ -1.38
NEK4-205ENST00000493199 ERICH6Q7L0X2 663 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 PLEKHM2Q8IWE5 1019 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 SPATA5Q8NB90 893 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 DNAJC2Q99543 621 aaKnown RBP6.43□□□□□ -1.38
NEK4-205ENST00000493199 FSD1Q9BTV5 496 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 RTFDC1Q9BY42 306 aaPredicted RBP6.43□□□□□ -1.38
NEK4-205ENST00000493199 PAG1Q9NWQ8 432 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 ZNF219Q9P2Y4 722 aaPredicted RBP6.43□□□□□ -1.38
NEK4-205ENST00000493199 ABCF2Q9UG63 623 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 LTBP3Q9NS15 1303 aa6.43□□□□□ -1.38
NEK4-205ENST00000493199 DDX60Q8IY21 1712 aaKnown RBP6.42□□□□□ -1.38
NEK4-205ENST00000493199 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
NEK4-205ENST00000493199 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
NEK4-205ENST00000493199 RIMBP2O15034 1052 aa6.42□□□□□ -1.38
NEK4-205ENST00000493199 EPB41L2O43491 1005 aaKnown RBP6.42□□□□□ -1.38
NEK4-205ENST00000493199 SMARCA5O60264 1052 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms