RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
MSH6-208ENST00000493177 GMPSP49915 693 aaPredicted RBP16.65■□□□□ 0.26
MSH6-208ENST00000493177 TAF7LQ5H9L4 462 aa16.65■□□□□ 0.26
MSH6-208ENST00000493177 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
MSH6-208ENST00000493177 BSDC1Q9NW68 430 aaPredicted RBP16.65■□□□□ 0.26
MSH6-208ENST00000493177 YDJCA8MPS7 323 aa16.64■□□□□ 0.25
MSH6-208ENST00000493177 CSF1RP07333 972 aa16.64■□□□□ 0.25
MSH6-208ENST00000493177 KCNJ4P48050 445 aa16.64■□□□□ 0.25
MSH6-208ENST00000493177 IFIT5Q13325 482 aaKnown RBP16.64■□□□□ 0.25
MSH6-208ENST00000493177 MTX1Q13505 466 aa16.64■□□□□ 0.25
MSH6-208ENST00000493177 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
MSH6-208ENST00000493177 MAP1SQ66K74 1059 aaPredicted RBP16.64■□□□□ 0.25
MSH6-208ENST00000493177 USP50Q70EL3 339 aaPredicted RBP16.64■□□□□ 0.25
MSH6-208ENST00000493177 SIRT2Q8IXJ6 389 aa16.64■□□□□ 0.25
MSH6-208ENST00000493177 ADARB2Q9NS39 739 aaKnown RBP16.64■□□□□ 0.25
MSH6-208ENST00000493177 GPRC5DQ9NZD1 345 aa16.64■□□□□ 0.25
MSH6-208ENST00000493177 H7C1D1 291 aa16.63■□□□□ 0.25
MSH6-208ENST00000493177 PSME4Q14997 1843 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 PSMD14O00487 310 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
MSH6-208ENST00000493177 POLA2Q14181 598 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 FBXW7Q969H0 707 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 KLRG1Q96E93 195 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 ANKRD2Q9GZV1 360 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 MINPP1Q9UNW1 487 aa16.62■□□□□ 0.25
MSH6-208ENST00000493177 TRPM7Q96QT4 1865 aa16.61■□□□□ 0.25
MSH6-208ENST00000493177 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
MSH6-208ENST00000493177 IGHDP01880 384 aa16.61■□□□□ 0.25
MSH6-208ENST00000493177 CNOT7Q9UIV1 285 aaKnown RBP16.61■□□□□ 0.25
MSH6-208ENST00000493177 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
MSH6-208ENST00000493177 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
MSH6-208ENST00000493177 A0A1B0GUL6 1792 aa16.61■□□□□ 0.25
MSH6-208ENST00000493177 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
MSH6-208ENST00000493177 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
MSH6-208ENST00000493177 MICALL2Q8IY33 904 aa16.6■□□□□ 0.25
MSH6-208ENST00000493177 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
MSH6-208ENST00000493177 ZNF594Q96JF6 807 aaPredicted RBP16.6■□□□□ 0.25
MSH6-208ENST00000493177 SIL1Q9H173 461 aa16.6■□□□□ 0.25
MSH6-208ENST00000493177 CREBZFQ9NS37 354 aa16.6■□□□□ 0.25
MSH6-208ENST00000493177 RPS12P25398 132 aaKnown RBP16.59■□□□□ 0.25
MSH6-208ENST00000493177 RFX5P48382 616 aaPredicted RBP16.59■□□□□ 0.25
MSH6-208ENST00000493177 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.252e-9■■■■■ 32.2
MSH6-208ENST00000493177 CNNM1Q9NRU3 951 aa16.59■□□□□ 0.25
MSH6-208ENST00000493177 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
MSH6-208ENST00000493177 LEMD3Q9Y2U8 911 aa16.59■□□□□ 0.25
MSH6-208ENST00000493177 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
MSH6-208ENST00000493177 TMEM88BA6NKF7 163 aa16.58■□□□□ 0.24
MSH6-208ENST00000493177 APBB1O00213 710 aa16.58■□□□□ 0.24
MSH6-208ENST00000493177 PTPN12Q05209 780 aaKnown RBP16.58■□□□□ 0.24
MSH6-208ENST00000493177 CHRNDQ07001 517 aa16.58■□□□□ 0.24
MSH6-208ENST00000493177 RBM26Q5T8P6 1007 aaKnown RBP16.58■□□□□ 0.24
MSH6-208ENST00000493177 DNAJC5GQ8N7S2 189 aa16.58■□□□□ 0.24
MSH6-208ENST00000493177 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
MSH6-208ENST00000493177 ZNF804BA4D1E1 1349 aa16.58■□□□□ 0.24
MSH6-208ENST00000493177 PASKQ96RG2 1323 aa16.58■□□□□ 0.24
MSH6-208ENST00000493177 ITGBL1O95965 494 aaPredicted RBP16.57■□□□□ 0.24
MSH6-208ENST00000493177 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
MSH6-208ENST00000493177 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
MSH6-208ENST00000493177 PODNQ7Z5L7 613 aa16.57■□□□□ 0.24
MSH6-208ENST00000493177 DPF2Q92785 391 aa16.57■□□□□ 0.24
MSH6-208ENST00000493177 GCC1Q96CN9 775 aa16.57■□□□□ 0.24
MSH6-208ENST00000493177 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
MSH6-208ENST00000493177 DCTPP1Q9H773 170 aa16.57■□□□□ 0.24
MSH6-208ENST00000493177 COPRSQ9NQ92 184 aa16.57■□□□□ 0.24
MSH6-208ENST00000493177 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
MSH6-208ENST00000493177 TBC1D10BQ4KMP7 808 aaPredicted RBP16.56■□□□□ 0.24
MSH6-208ENST00000493177 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
MSH6-208ENST00000493177 TRPM4Q8TD43 1214 aa16.56■□□□□ 0.24
MSH6-208ENST00000493177 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
MSH6-208ENST00000493177 ABT1Q9ULW3 272 aaKnown RBP16.56■□□□□ 0.24
MSH6-208ENST00000493177 SHTN1A0MZ66 631 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 USP17L3A6NCW0 530 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 EYA2O00167 538 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 TAF5LO75529 589 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
MSH6-208ENST00000493177 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 HELBQ8NG08 1087 aaPredicted RBP16.55■□□□□ 0.24
MSH6-208ENST00000493177 PUS3Q9BZE2 481 aaKnown RBP16.55■□□□□ 0.24
MSH6-208ENST00000493177 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
MSH6-208ENST00000493177 NOP58Q9Y2X3 529 aaKnown RBP16.55■□□□□ 0.24
MSH6-208ENST00000493177 POLR2AP24928 1970 aaKnown RBP16.55■□□□□ 0.24
MSH6-208ENST00000493177 RAB11FIP3O75154 756 aa16.54■□□□□ 0.24
MSH6-208ENST00000493177 VIL1P09327 827 aaKnown RBP16.54■□□□□ 0.24
MSH6-208ENST00000493177 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
MSH6-208ENST00000493177 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
MSH6-208ENST00000493177 RSBN1LQ6PCB5 846 aaPredicted RBP16.54■□□□□ 0.24
MSH6-208ENST00000493177 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
MSH6-208ENST00000493177 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
MSH6-208ENST00000493177 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
MSH6-208ENST00000493177 CIAO1O76071 339 aa16.53■□□□□ 0.24
MSH6-208ENST00000493177 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
MSH6-208ENST00000493177 ANKRD45Q5TZF3 282 aa16.53■□□□□ 0.24
MSH6-208ENST00000493177 SMC5Q8IY18 1101 aa16.53■□□□□ 0.24
MSH6-208ENST00000493177 AGBL3Q8NEM8 1001 aa16.53■□□□□ 0.24
MSH6-208ENST00000493177 ZC3H15Q8WU90 426 aaKnown RBP16.53■□□□□ 0.24
MSH6-208ENST00000493177 DCPSQ96C86 337 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms