RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	BIN2	Q9UBW5	565 aa	Predicted RBP	7.28	□□□□□ -1.24
SEC13-219	ENST00000492602	POLL	Q9UGP5	575 aa		7.28	□□□□□ -1.24
SEC13-219	ENST00000492602	MAP3K15	Q6ZN16	1313 aa		7.27	□□□□□ -1.24
SEC13-219	ENST00000492602	SYNGAP1	Q96PV0	1343 aa		7.27	□□□□□ -1.24
SEC13-219	ENST00000492602	TESPA1	A2RU30	521 aa	Predicted RBP	7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	SGPL1	O95470	568 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	GRK4	P32298	578 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	PRMT2	P55345	433 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	UBXN2A	P68543	259 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	SLC10A5	Q5PT55	438 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	ZNF697	Q5TEC3	545 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	TTLL7	Q6ZT98	887 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	TMC4	Q7Z404	712 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	ZNF34	Q8IZ26	560 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	RAET1E	Q8TD07	263 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	CDX2	Q99626	313 aa	Predicted RBP	7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	UTP14A	Q9BVJ6	771 aa	Known RBP	7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	PRUNE2	Q8WUY3	3088 aa		7.27	□□□□□ -1.25
SEC13-219	ENST00000492602	WNT10B	O00744	389 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	PPP1R12B	O60237	982 aa	Predicted RBP	7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	GNRH1	P01148	92 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	TFRC	P02786	760 aa	Known RBP	7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	HCLS1	P14317	486 aa	Predicted RBP	7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	GJA5	P36382	358 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	GPSM2	P81274	684 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	LACTB	P83111	547 aa	Predicted RBP	7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	TBC1D16	Q8TBP0	767 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	PAWR	Q96IZ0	340 aa	Known RBP	7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	TRIM47	Q96LD4	638 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	RIPOR2	Q9Y4F9	1068 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	TAF1	P21675	1872 aa		7.26	□□□□□ -1.25
SEC13-219	ENST00000492602	ZNF646	O15015	1829 aa	Predicted RBP	7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	WDHD1	O75717	1129 aa	Predicted RBP	7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	SASH1	O94885	1247 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	MAP3K11	Q16584	847 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	PARP10	Q53GL7	1025 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	ALYREF	Q86V81	257 aa	Known RBP	7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	MORC1	Q86VD1	984 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	OGFOD1	Q8N543	542 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	CNKSR2	Q8WXI2	1034 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	GML	Q99445	158 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	UNC93B1	Q9H1C4	597 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	RRP7A	Q9Y3A4	280 aa	Known RBP	7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	HCN4	Q9Y3Q4	1203 aa		7.25	□□□□□ -1.25
SEC13-219	ENST00000492602	CACNA1A	O00555	2505 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	TLR2	O60603	784 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	MYL6B	P14649	208 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	HOXD10	P28358	340 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	NECAB2	Q7Z6G3	386 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	FAM43A	Q8N2R8	423 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	GAS2L2	Q8NHY3	880 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	BRI3BP	Q8WY22	251 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	MYLIP	Q8WY64	445 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	CELF1	Q92879	486 aa	Known RBP	7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	POLR3GL	Q9BT43	218 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	SRRD	Q9UH36	339 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	ARIH1	Q9Y4X5	557 aa	Predicted RBP	7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	SCN9A	Q15858	1988 aa		7.24	□□□□□ -1.25
SEC13-219	ENST00000492602	ZSWIM8	A7E2V4	1837 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	NUP98	P52948	1817 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	CCL15-CCL14	A0A0B4J2E2	113 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	USP17L3	A6NCW0	530 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	USP17L4	A6NCW7	530 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	UNCX	A6NJT0	531 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	FOSL2	P15408	326 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	OSBP	P22059	807 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	PSMC4	P43686	418 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	IREB2	P48200	963 aa	Known RBP	7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	CCL15	Q16663	113 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	USP17L1	Q7RTZ2	530 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	OPTN	Q96CV9	577 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	MS4A4A	Q96JQ5	239 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	DEFB118	Q96PH6	123 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	DEFB129	Q9H1M3	183 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	ELP3	Q9H9T3	547 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	MYPN	Q86TC9	1320 aa		7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	LAMA2	P24043	3122 aa	Known RBP	7.23	□□□□□ -1.25
SEC13-219	ENST00000492602	CEMIP	Q8WUJ3	1361 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	CDH23	Q9H251	3354 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	DDX60	Q8IY21	1712 aa	Known RBP	7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	UFL1	O94874	794 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	FMNL1	O95466	1100 aa	Predicted RBP	7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	CTGF	P29279	349 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	ANKRD13A	Q8IZ07	590 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	DIS3L	Q8TF46	1054 aa	Known RBP	7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	MXD3	Q9BW11	206 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	C1QTNF1	Q9BXJ1	281 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	SEMA6B	Q9H3T3	888 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	SIPA1L3	O60292	1781 aa	Predicted RBP	7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	PIEZO1	Q92508	2521 aa		7.22	□□□□□ -1.25
SEC13-219	ENST00000492602	USP2	O75604	605 aa	Predicted RBP	7.21	□□□□□ -1.26
SEC13-219	ENST00000492602	CAPN2	P17655	700 aa		7.21	□□□□□ -1.26
SEC13-219	ENST00000492602	GTF2A2	P52657	109 aa		7.21	□□□□□ -1.26
SEC13-219	ENST00000492602	MDM2	Q00987	491 aa	Predicted RBP	7.21	□□□□□ -1.26
SEC13-219	ENST00000492602	SUPT20HL1	Q3ZLR7	823 aa		7.21	□□□□□ -1.26
SEC13-219	ENST00000492602	SLAIN1	Q8ND83	568 aa		7.21	□□□□□ -1.26
SEC13-219	ENST00000492602	FBXW7	Q969H0	707 aa		7.21	□□□□□ -1.26
SEC13-219	ENST00000492602	ANKIB1	Q9P2G1	1089 aa		7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms