RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 AGBL5Q8NDL9 886 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 ARXQ96QS3 562 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 RNF208Q9H0X6 261 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 QTRT2Q9H974 415 aaKnown RBP5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 KCNK4Q9NYG8 393 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 TFIP11Q9UBB9 837 aaKnown RBP5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 CCDC39Q9UFE4 941 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 MAFBQ9Y5Q3 323 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 FOXO3O43524 673 aa5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 FOSL1P15407 271 aa5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 RXRBP28702 533 aa5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 CBLL1Q75N03 491 aa5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 FBXL6Q8N531 539 aa5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 MYO19Q96H55 970 aa5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 METTL22Q9BUU2 404 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 SEC31BQ9NQW1 1179 aa5.65□□□□□ -1.5
HMGB1P30-201ENST00000492455 LGR5O75473 907 aa5.64□□□□□ -1.51
HMGB1P30-201ENST00000492455 PREPP48147 710 aa5.64□□□□□ -1.51
HMGB1P30-201ENST00000492455 CABP4P57796 275 aa5.64□□□□□ -1.51
HMGB1P30-201ENST00000492455 PKN1Q16512 942 aa5.64□□□□□ -1.51
HMGB1P30-201ENST00000492455 UBASH3BQ8TF42 649 aa5.64□□□□□ -1.51
HMGB1P30-201ENST00000492455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 PRNPP04156 253 aa5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 ITGB5P18084 799 aa5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 PTPRAP18433 802 aa5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 MAP4P27816 1152 aaKnown RBP5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 SCNN1AP37088 669 aa5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 ATP11AP98196 1134 aa5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 MSMPQ1L6U9 139 aa5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 RUSC1Q9BVN2 902 aa5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 BSDC1Q9NW68 430 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P30-201ENST00000492455 DDX3YO15523 660 aaKnown RBP5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 LMOD1P29536 600 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 DPYDQ12882 1025 aa5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 FBLN7Q53RD9 439 aa5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 KANK4Q5T7N3 995 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 TTC39BQ5VTQ0 682 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 FLCNQ8NFG4 579 aa5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 OR13H1Q8NG92 308 aa5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 FOXD4L4Q8WXT5 416 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 WNT8BQ93098 351 aa5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 FAM13BQ9NYF5 915 aa5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 KCNMB2Q9Y691 235 aa5.62□□□□□ -1.51
HMGB1P30-201ENST00000492455 DBX1A6NMT0 343 aa5.61□□□□□ -1.51
HMGB1P30-201ENST00000492455 UBAP1LF5GYI3 381 aa5.61□□□□□ -1.51
HMGB1P30-201ENST00000492455 BIN1O00499 593 aa5.61□□□□□ -1.51
HMGB1P30-201ENST00000492455 RFX1P22670 979 aa5.61□□□□□ -1.51
HMGB1P30-201ENST00000492455 PIP4K2BP78356 416 aa5.61□□□□□ -1.51
HMGB1P30-201ENST00000492455 HOMEZQ8IX15 550 aa5.61□□□□□ -1.51
HMGB1P30-201ENST00000492455 H3BRJ5 948 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 CYP26A1O43174 497 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 ADAM11O75078 769 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 F13BP05160 661 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 EPHA1P21709 976 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 ARL4DP49703 201 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 ZNF648Q5T619 568 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 PAOXQ6QHF9 649 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 PIK3R5Q8WYR1 880 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 PBXIP1Q96AQ6 731 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 KLHDC7BQ96G42 594 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 RASSF4Q9H2L5 321 aa5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 FNDC3AQ9Y2H6 1198 aaKnown RBP5.6□□□□□ -1.51
HMGB1P30-201ENST00000492455 NLRP12P59046 1061 aa5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 SGO2Q562F6 1265 aa5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 NUTM2GQ5VZR2 741 aa5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 NCAPG2Q86XI2 1143 aa5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 ANKMY2Q8IV38 441 aa5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 PBX4Q9BYU1 374 aa5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 OSGEPQ9NPF4 335 aa5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 SH2B1Q9NRF2 756 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P30-201ENST00000492455 FAM95CA0A1B0GW59 222 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 PPP1R15AO75807 674 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 FARP2O94887 1054 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 WEE1P30291 646 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP11P51784 963 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 PTK7Q13308 1070 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 NFKBIBQ15653 356 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 CRTC2Q53ET0 693 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 CDCA8Q53HL2 280 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 C12orf50Q8NA57 414 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 RETREG2Q8NC44 543 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L15C9J2P7 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L10C9JJH3 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L13C9JLJ4 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L12C9JPN9 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L11C9JVI0 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L21D6R901 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L18D6R9N7 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L22D6RA61 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L17D6RBQ6 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L19D6RCP7 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L20D6RJB6 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 TM4SF5O14894 197 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 USP17L24Q0WX57 530 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 TRIP4Q15650 581 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 ZNF124Q15973 351 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 COL13A1Q5TAT6 717 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 KSR1Q8IVT5 923 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms