RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 FAM161AQ3B820 660 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 STRIP1Q5VSL9 837 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 DLK2Q6UY11 383 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 KRT26Q7Z3Y9 468 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 AIDAQ96BJ3 306 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 ANKRD2Q9GZV1 360 aa10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 SALL2Q9Y467 1007 aaPredicted RBP10.68□□□□□ -0.7
SMARCB1-207ENST00000491967 ZNF804BA4D1E1 1349 aa10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 UTYO14607 1347 aa10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 PITPNM2Q9BZ72 1349 aa10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 FAM155AB1AL88 458 aaPredicted RBP10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 ALDH1L1O75891 902 aa10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 LBX1P52954 281 aa10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 FAM9BQ8IZU0 186 aa10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 DCPSQ96C86 337 aaKnown RBP10.67□□□□□ -0.7
SMARCB1-207ENST00000491967 ASTN2O75129 1339 aaPredicted RBP10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 G3V3G9 751 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 GRM8O00222 908 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 AOC2O75106 756 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 BRPF1P55201 1214 aaPredicted RBP10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 CHRNDQ07001 517 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 SCARF1Q14162 830 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 EPHA10Q5JZY3 1008 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 DCAF8Q5TAQ9 597 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 ZBED3Q96IU2 234 aaPredicted RBP10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 GBA2Q9HCG7 927 aaPredicted RBP10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 MYOZ2Q9NPC6 264 aa10.66□□□□□ -0.7
SMARCB1-207ENST00000491967 MYO3BQ8WXR4 1341 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 ANKRD18BA2A2Z9 1011 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 ADM5C9JUS6 153 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 CA12O43570 354 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 KLRK1P26718 216 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 NOGQ13253 232 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 SULF1Q8IWU6 871 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 TRMT2AQ8IZ69 625 aaKnown RBP10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 MPHOSPH8Q99549 860 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 GGA3Q9NZ52 723 aa10.65□□□□□ -0.7
SMARCB1-207ENST00000491967 IL1R1P14778 569 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 HUNKP57058 714 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 FKBP1BP68106 108 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 IFIT5Q13325 482 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 ANGEL2Q5VTE6 544 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 TTLL5Q6EMB2 1281 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 RGMBQ6NW40 437 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 LMBR1LQ6UX01 489 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 C2orf69Q8N8R5 385 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 CDCA5Q96FF9 252 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 ZIC5Q96T25 663 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
SMARCB1-207ENST00000491967 CASP8AP2Q9UKL3 1982 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 E9PSI1 815 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 WNT10BO00744 389 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 FKBP1AP62942 108 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 SLFN5Q08AF3 891 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 NBPF9Q3BBW0 867 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 MTMR14Q8NCE2 650 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 CCDC102AQ96A19 550 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 MXD3Q9BW11 206 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 SRCIN1Q9C0H9 1055 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 ZNF408Q9H9D4 720 aa10.63□□□□□ -0.71
SMARCB1-207ENST00000491967 PAPPA2Q9BXP8 1791 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 SNAP23O00161 211 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 TAF5LO75529 589 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 NBPF7P0C2Y1 421 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 OGFOD1Q8N543 542 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 CERS5Q8N5B7 392 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 RIPOR2Q9Y4F9 1068 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 AKAP11Q9UKA4 1901 aa10.62□□□□□ -0.71
SMARCB1-207ENST00000491967 PTPRCP08575 1304 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 SLC10A3P09131 477 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 GTF2IP78347 998 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 CCDC57Q2TAC2 916 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 LDHAL6AQ6ZMR3 332 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 HELBQ8NG08 1087 aaPredicted RBP10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 SSH1Q8WYL5 1049 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 C9orf78Q9NZ63 289 aaPredicted RBP10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 ECM29Q5VYK3 1845 aa10.61□□□□□ -0.71
SMARCB1-207ENST00000491967 SASH1O94885 1247 aa10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 GRM1Q13255 1194 aa10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 UBE4AQ14139 1066 aa10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 ANKRD44Q8N8A2 993 aa10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 TDRD7Q8NHU6 1098 aaKnown RBP10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 SUCLG2Q96I99 432 aa10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 USP44Q9H0E7 712 aa10.6□□□□□ -0.71
SMARCB1-207ENST00000491967 FAM205AQ6ZU69 1335 aa10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 KCNJ4P48050 445 aa10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 ZNF157P51786 506 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 KIF23Q02241 960 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 ALDH1L2Q3SY69 923 aa10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 LDLRAD1Q5T700 205 aa10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 SLC4A10Q6U841 1118 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms