RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 RBBP6Q7Z6E9 1792 aaKnown RBP14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 K7ELQ4 463 aaPredicted RBP14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 PDE6BP35913 854 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 EPS15P42566 896 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 HUNKP57058 714 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 RABL6Q3YEC7 729 aaPredicted RBP14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 CHRDL2Q6WN34 429 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 USP50Q70EL3 339 aaPredicted RBP14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 CCDC191Q8NCU4 936 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 PI4K2BQ8TCG2 481 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 RILPL2Q969X0 211 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 KAZALD1Q96I82 304 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 BICC1Q9H694 974 aaKnown RBP14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 IL1RAPL2Q9NP60 686 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 COPRSQ9NQ92 184 aa14.49□□□□□ -0.09
SRGAP3-210ENST00000491467 H7C1W4 665 aa14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 ST18O60284 1047 aa14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 IFIT2P09913 472 aaKnown RBP14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 TICAM2Q86XR7 235 aa14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 RUFY2Q8WXA3 655 aa14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 CNKSR1Q969H4 720 aa14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 ECHDC1Q9NTX5 307 aa14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 TJP1Q07157 1748 aa14.48□□□□□ -0.09
SRGAP3-210ENST00000491467 MYH3P11055 1940 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 NBPF26B4DH59 902 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 FZD9O00144 591 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 HIP1O00291 1037 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 STARD3NLO95772 234 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 MCM2P49736 904 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 TRIM28Q13263 835 aaKnown RBP14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 PRPF40BQ6NWY9 871 aaKnown RBP14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 NBPF10Q6P3W6 841 aaKnown RBP14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 NUTM1Q86Y26 1132 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 PRDM6Q9NQX0 595 aa14.47□□□□□ -0.09
SRGAP3-210ENST00000491467 NUP98P52948 1817 aa14.46□□□□□ -0.09
SRGAP3-210ENST00000491467 A0A087WZG4 1122 aa14.46□□□□□ -0.09
SRGAP3-210ENST00000491467 FKBP4Q02790 459 aaKnown RBP eCLIP14.46□□□□□ -0.09
SRGAP3-210ENST00000491467 BCL11AQ9H165 835 aa14.46□□□□□ -0.09
SRGAP3-210ENST00000491467 SLKQ9H2G2 1235 aaPredicted RBP14.46□□□□□ -0.09
SRGAP3-210ENST00000491467 CWC25Q9NXE8 425 aaPredicted RBP14.46□□□□□ -0.09
SRGAP3-210ENST00000491467 UNC80Q8N2C7 3258 aa14.46□□□□□ -0.09
SRGAP3-210ENST00000491467 FAM155AB1AL88 458 aaPredicted RBP14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 H0YGN5 161 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 CEP290O15078 2479 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 DDIT3P35638 169 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 CASP7P55210 303 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 CCDC93Q567U6 631 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 RGMBQ6NW40 437 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 CCDC24Q8N4L8 307 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 RBM27Q9P2N5 1060 aaKnown RBP14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 BCORQ6W2J9 1755 aa14.45□□□□□ -0.1
SRGAP3-210ENST00000491467 PTCD1O75127 700 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 SASH1O94885 1247 aa14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 COL9A1P20849 921 aa14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 PTMSP20962 102 aa14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 EIF6P56537 245 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 ZNF296Q8WUU4 475 aaPredicted RBP14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 CCDC102AQ96A19 550 aa14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 BRIP1Q9BX63 1249 aa14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 CWC22Q9HCG8 908 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
SRGAP3-210ENST00000491467 A1BGP04217 495 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 HSP90AA1P07900 732 aaKnown RBP14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 TCIRG1Q13488 830 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 HSP90AB3PQ58FF7 597 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 UBE3BQ7Z3V4 1068 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 AACSQ86V21 672 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 JDP2Q8WYK2 163 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 CSRNP1Q96S65 589 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 GPR108Q9NPR9 543 aa14.43□□□□□ -0.1
SRGAP3-210ENST00000491467 SGSM2O43147 1006 aa14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 EN2P19622 333 aaPredicted RBP14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 IARSP41252 1262 aaKnown RBP14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 RFX5P48382 616 aaPredicted RBP14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 SCNN1DP51172 638 aa14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 ZNF157P51786 506 aaPredicted RBP14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 KIF6Q6ZMV9 814 aa14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 KIAA1211Q6ZU35 1233 aa14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 ISCA1Q9BUE6 129 aa14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 NARFQ9UHQ1 456 aa14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 PA2G4Q9UQ80 394 aaKnown RBP14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 SPEF2Q9C093 1822 aa14.42□□□□□ -0.1
SRGAP3-210ENST00000491467 FRAT2O75474 233 aaPredicted RBP14.41□□□□□ -0.1
SRGAP3-210ENST00000491467 PTPN12Q05209 780 aaKnown RBP14.41□□□□□ -0.1
SRGAP3-210ENST00000491467 STYK1Q6J9G0 422 aa14.41□□□□□ -0.1
SRGAP3-210ENST00000491467 INTS5Q6P9B9 1019 aaKnown RBP14.41□□□□□ -0.1
SRGAP3-210ENST00000491467 KIAA0100Q14667 2235 aaKnown RBP14.41□□□□□ -0.1
SRGAP3-210ENST00000491467 RAD50Q92878 1312 aa14.41□□□□□ -0.1
SRGAP3-210ENST00000491467 ATP5J2-PTCD1G3V325 749 aa14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 FOXO4P98177 505 aa14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 EPHA10Q5JZY3 1008 aa14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 TSHZ3Q63HK5 1081 aa14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 TTLL7Q6ZT98 887 aa14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 EAF2Q96CJ1 260 aaPredicted RBP14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 PLA2G12BQ9BX93 195 aa14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 ANO2Q9NQ90 1003 aa14.4□□□□□ -0.1
SRGAP3-210ENST00000491467 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
SRGAP3-210ENST00000491467 CIAO1O76071 339 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms