RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
NCSTN-213ENST00000491332 TMEM102Q8N9M5 508 aaPredicted RBP9.07□□□□□ -0.96
NCSTN-213ENST00000491332 IRF7Q92985 503 aa9.07□□□□□ -0.96
NCSTN-213ENST00000491332 BHLHE41Q9C0J9 482 aaPredicted RBP9.07□□□□□ -0.96
NCSTN-213ENST00000491332 METTL5Q9NRN9 209 aaKnown RBP9.07□□□□□ -0.96
NCSTN-213ENST00000491332 USP31Q70CQ4 1352 aa9.07□□□□□ -0.96
NCSTN-213ENST00000491332 METTL12A8MUP2 240 aa9.06□□□□□ -0.96
NCSTN-213ENST00000491332 GRIA4P48058 902 aa9.06□□□□□ -0.96
NCSTN-213ENST00000491332 FCGRTP55899 365 aa9.06□□□□□ -0.96
NCSTN-213ENST00000491332 SRSF11Q05519 484 aaKnown RBP9.06□□□□□ -0.96
NCSTN-213ENST00000491332 PERM1Q5SV97 790 aa9.06□□□□□ -0.96
NCSTN-213ENST00000491332 NXPE3Q969Y0 559 aa9.06□□□□□ -0.96
NCSTN-213ENST00000491332 OXCT2Q9BYC2 517 aaPredicted RBP9.06□□□□□ -0.96
NCSTN-213ENST00000491332 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
NCSTN-213ENST00000491332 ELOA3DA6NLF2 546 aaPredicted RBP9.05□□□□□ -0.96
NCSTN-213ENST00000491332 PDE2AO00408 941 aaPredicted RBP9.05□□□□□ -0.96
NCSTN-213ENST00000491332 ELOA3BQ3SY89 546 aa9.05□□□□□ -0.96
NCSTN-213ENST00000491332 SLCO4C1Q6ZQN7 724 aa9.05□□□□□ -0.96
NCSTN-213ENST00000491332 METTL16Q86W50 562 aaKnown RBP9.05□□□□□ -0.96
NCSTN-213ENST00000491332 GOLGA6L1Q8N7Z2 621 aa9.05□□□□□ -0.96
NCSTN-213ENST00000491332 ELOA3Q8NG57 546 aa9.05□□□□□ -0.96
NCSTN-213ENST00000491332 LPIN3Q9BQK8 851 aa9.05□□□□□ -0.96
NCSTN-213ENST00000491332 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
NCSTN-213ENST00000491332 PPP4R2Q9NY27 417 aa9.05□□□□□ -0.96
NCSTN-213ENST00000491332 GDF2Q9UK05 429 aaPredicted RBP9.05□□□□□ -0.96
NCSTN-213ENST00000491332 ZNF76P36508 570 aa9.04□□□□□ -0.96
NCSTN-213ENST00000491332 ST13P50502 369 aaKnown RBP9.04□□□□□ -0.96
NCSTN-213ENST00000491332 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
NCSTN-213ENST00000491332 LCE2CQ5TA81 110 aa9.04□□□□□ -0.96
NCSTN-213ENST00000491332 PLD4Q96BZ4 506 aa9.04□□□□□ -0.96
NCSTN-213ENST00000491332 XRCC5P13010 732 aaKnown RBP9.03□□□□□ -0.96
NCSTN-213ENST00000491332 ITPKAP23677 461 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 SPRED3Q2MJR0 410 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 CEP135Q66GS9 1140 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 ADAMTSL4Q6UY14 1074 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 C1orf229Q6ZS94 237 aaPredicted RBP9.03□□□□□ -0.96
NCSTN-213ENST00000491332 RNF34Q969K3 372 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 ACDQ96AP0 544 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
NCSTN-213ENST00000491332 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
NCSTN-213ENST00000491332 FRRS1LQ9P0K9 344 aa9.03□□□□□ -0.96
NCSTN-213ENST00000491332 A0A096LPE4 126 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 A0A1W2PPZ6 126 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
NCSTN-213ENST00000491332 ADAMTS2O95450 1211 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 EPXP11678 715 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 RAD51AP2Q09MP3 1159 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 ASAP3Q8TDY4 903 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
NCSTN-213ENST00000491332 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
NCSTN-213ENST00000491332 PTPN12Q05209 780 aaKnown RBP9.01□□□□□ -0.97
NCSTN-213ENST00000491332 PSAPL1Q6NUJ1 521 aa9.01□□□□□ -0.97
NCSTN-213ENST00000491332 MICALL1Q8N3F8 863 aa9.01□□□□□ -0.97
NCSTN-213ENST00000491332 ZNF576Q9H609 170 aa9.01□□□□□ -0.97
NCSTN-213ENST00000491332 PPM1HQ9ULR3 514 aa9.01□□□□□ -0.97
NCSTN-213ENST00000491332 AKAP2Q9Y2D5 859 aa9.01□□□□□ -0.97
NCSTN-213ENST00000491332 NT5DC4Q86YG4 428 aa9□□□□□ -0.97
NCSTN-213ENST00000491332 MUC3BQ9H195 1237 aa9□□□□□ -0.97
NCSTN-213ENST00000491332 TRIM33Q9UPN9 1127 aa9□□□□□ -0.97
NCSTN-213ENST00000491332 SLURP2P0DP57 97 aa8.99□□□□□ -0.97
NCSTN-213ENST00000491332 ALAS2P22557 587 aa8.99□□□□□ -0.97
NCSTN-213ENST00000491332 ERCC5P28715 1186 aaPredicted RBP8.99□□□□□ -0.97
NCSTN-213ENST00000491332 MAP3K10Q02779 954 aa8.99□□□□□ -0.97
NCSTN-213ENST00000491332 C20orf204Q6ZNR8 217 aa8.99□□□□□ -0.97
NCSTN-213ENST00000491332 TTC9Q92623 222 aa8.99□□□□□ -0.97
NCSTN-213ENST00000491332 ADAM19Q9H013 955 aa8.99□□□□□ -0.97
NCSTN-213ENST00000491332 SOX13Q9UN79 622 aa8.99□□□□□ -0.97
NCSTN-213ENST00000491332 FBXO24O75426 580 aa8.98□□□□□ -0.97
NCSTN-213ENST00000491332 GRIK5Q16478 980 aa8.98□□□□□ -0.97
NCSTN-213ENST00000491332 BSNDQ8WZ55 320 aa8.98□□□□□ -0.97
NCSTN-213ENST00000491332 ZFYVE1Q9HBF4 777 aa8.98□□□□□ -0.97
NCSTN-213ENST00000491332 ALBP02768 609 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 PTPRAP18433 802 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 GMPRP36959 345 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 FAAP100Q0VG06 881 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 RPS26P11Q5JNZ5 115 aaPredicted RBP8.97□□□□□ -0.97
NCSTN-213ENST00000491332 TPTE2Q6XPS3 522 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 HS2ST1Q7LGA3 356 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 ERMP1Q7Z2K6 904 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 NUDT8Q8WV74 236 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 EDARADDQ8WWZ3 215 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 LACRTQ9GZZ8 138 aa8.97□□□□□ -0.97
NCSTN-213ENST00000491332 OIP5O43482 229 aa8.96□□□□□ -0.98
NCSTN-213ENST00000491332 RGS9O75916 674 aaPredicted RBP8.96□□□□□ -0.98
NCSTN-213ENST00000491332 VN1R5Q7Z5H4 357 aa8.96□□□□□ -0.98
NCSTN-213ENST00000491332 GALNT6Q8NCL4 622 aa8.96□□□□□ -0.98
NCSTN-213ENST00000491332 NOC4LQ9BVI4 516 aaKnown RBP8.96□□□□□ -0.98
NCSTN-213ENST00000491332 CLEC4MQ9H2X3 399 aaPredicted RBP8.96□□□□□ -0.98
NCSTN-213ENST00000491332 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.98
NCSTN-213ENST00000491332 SH2B1Q9NRF2 756 aaPredicted RBP8.96□□□□□ -0.98
NCSTN-213ENST00000491332 GGT7Q9UJ14 662 aa8.96□□□□□ -0.98
NCSTN-213ENST00000491332 SHISA8B8ZZ34 492 aa8.95□□□□□ -0.98
NCSTN-213ENST00000491332 WFS1O76024 890 aa8.95□□□□□ -0.98
NCSTN-213ENST00000491332 CCDC85BQ15834 202 aaPredicted RBP8.95□□□□□ -0.98
NCSTN-213ENST00000491332 ZNF394Q53GI3 561 aa8.95□□□□□ -0.98
NCSTN-213ENST00000491332 GDF6Q6KF10 455 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms