RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 RTL5Q5HYW3 569 aaPredicted RBP10.98□□□□□ -0.65
HPS4-215ENST00000491142 ANGEL2Q5VTE6 544 aaKnown RBP10.98□□□□□ -0.65
HPS4-215ENST00000491142 MOB2Q70IA6 237 aa10.98□□□□□ -0.65
HPS4-215ENST00000491142 WDR63Q8IWG1 891 aa10.98□□□□□ -0.65
HPS4-215ENST00000491142 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
HPS4-215ENST00000491142 TBC1D16Q8TBP0 767 aa10.98□□□□□ -0.65
HPS4-215ENST00000491142 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
HPS4-215ENST00000491142 AKAP11Q9UKA4 1901 aa10.97□□□□□ -0.65
HPS4-215ENST00000491142 ATP5J2-PTCD1G3V325 749 aa10.97□□□□□ -0.65
HPS4-215ENST00000491142 TBC1D8O95759 1140 aa10.97□□□□□ -0.65
HPS4-215ENST00000491142 KRT24Q2M2I5 525 aa10.97□□□□□ -0.65
HPS4-215ENST00000491142 ZNF296Q8WUU4 475 aaPredicted RBP10.97□□□□□ -0.65
HPS4-215ENST00000491142 EYA3Q99504 573 aa10.97□□□□□ -0.65
HPS4-215ENST00000491142 TSPYL2Q9H2G4 693 aaPredicted RBP10.97□□□□□ -0.65
HPS4-215ENST00000491142 MAPK8IP3Q9UPT6 1336 aa10.97□□□□□ -0.65
HPS4-215ENST00000491142 RIPK4P57078 832 aa10.96□□□□□ -0.65
HPS4-215ENST00000491142 ZNF280AP59817 542 aaPredicted RBP10.96□□□□□ -0.65
HPS4-215ENST00000491142 RPS8P62241 208 aaKnown RBP10.96□□□□□ -0.65
HPS4-215ENST00000491142 ISCA1Q9BUE6 129 aa10.96□□□□□ -0.65
HPS4-215ENST00000491142 ZC3H12CQ9C0D7 883 aaKnown RBP10.96□□□□□ -0.65
HPS4-215ENST00000491142 HDAC9Q9UKV0 1011 aa10.96□□□□□ -0.65
HPS4-215ENST00000491142 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
HPS4-215ENST00000491142 CENPFP49454 3210 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 UBE2Q2LH0YL09 131 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
HPS4-215ENST00000491142 PKN2Q16513 984 aaKnown RBP10.95□□□□□ -0.66
HPS4-215ENST00000491142 PRAMEF18Q5VWM3 479 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 RSBN1LQ6PCB5 846 aaPredicted RBP10.95□□□□□ -0.66
HPS4-215ENST00000491142 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 PLBD2Q8NHP8 589 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
HPS4-215ENST00000491142 SEC31BQ9NQW1 1179 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 BABAM1Q9NWV8 329 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 CHPF2Q9P2E5 772 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 SCN9AQ15858 1988 aa10.95□□□□□ -0.66
HPS4-215ENST00000491142 HTTP42858 3142 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 G3V3G9 751 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 IRS4O14654 1257 aaPredicted RBP10.94□□□□□ -0.66
HPS4-215ENST00000491142 UFL1O94874 794 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 FKBP1BP68106 108 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 AGBL3Q8NEM8 1001 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 CRBNQ96SW2 442 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 GMLQ99445 158 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 MYOZ2Q9NPC6 264 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
HPS4-215ENST00000491142 FANCIQ9NVI1 1328 aa10.93□□□□□ -0.66
HPS4-215ENST00000491142 GPR25O00155 361 aa10.93□□□□□ -0.66
HPS4-215ENST00000491142 PLIN1O60240 522 aa10.93□□□□□ -0.66
HPS4-215ENST00000491142 USP17L8P0C7I0 530 aa10.93□□□□□ -0.66
HPS4-215ENST00000491142 TM4SF4P48230 202 aa10.93□□□□□ -0.66
HPS4-215ENST00000491142 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
HPS4-215ENST00000491142 R3HDMLQ9H3Y0 253 aa10.93□□□□□ -0.66
HPS4-215ENST00000491142 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
HPS4-215ENST00000491142 IL16Q14005 1332 aa10.92□□□□□ -0.66
HPS4-215ENST00000491142 TMPOP42166 694 aaKnown RBP10.92□□□□□ -0.66
HPS4-215ENST00000491142 NBPF9Q3BBW0 867 aa10.92□□□□□ -0.66
HPS4-215ENST00000491142 FBXO46Q6PJ61 603 aaPredicted RBP10.92□□□□□ -0.66
HPS4-215ENST00000491142 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
HPS4-215ENST00000491142 GGA1Q9UJY5 639 aa10.92□□□□□ -0.66
HPS4-215ENST00000491142 BRCA2P51587 3418 aa10.92□□□□□ -0.66
HPS4-215ENST00000491142 PAPPA2Q9BXP8 1791 aa10.92□□□□□ -0.66
HPS4-215ENST00000491142 PITPNM2Q9BZ72 1349 aa10.91□□□□□ -0.66
HPS4-215ENST00000491142 WTIPA6NIX2 430 aaPredicted RBP10.91□□□□□ -0.66
HPS4-215ENST00000491142 CHL1O00533 1208 aa10.91□□□□□ -0.66
HPS4-215ENST00000491142 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
HPS4-215ENST00000491142 TTLL12Q14166 644 aaPredicted RBP10.91□□□□□ -0.66
HPS4-215ENST00000491142 HDGFL1Q5TGJ6 251 aa10.91□□□□□ -0.66
HPS4-215ENST00000491142 DCBLD2Q96PD2 775 aa10.91□□□□□ -0.66
HPS4-215ENST00000491142 LAS1LQ9Y4W2 734 aaKnown RBP10.91□□□□□ -0.66
HPS4-215ENST00000491142 ZNF609O15014 1411 aa10.91□□□□□ -0.66
HPS4-215ENST00000491142 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 FKTNO75072 461 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 TRIM28Q13263 835 aaKnown RBP10.9□□□□□ -0.66
HPS4-215ENST00000491142 PDE3AQ14432 1141 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 NOM1Q5C9Z4 860 aaKnown RBP10.9□□□□□ -0.66
HPS4-215ENST00000491142 C20orf194Q5TEA3 1177 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 JARID2Q92833 1246 aaPredicted RBP10.9□□□□□ -0.66
HPS4-215ENST00000491142 CCDC85AQ96PX6 553 aaPredicted RBP10.9□□□□□ -0.66
HPS4-215ENST00000491142 MXD3Q9BW11 206 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
HPS4-215ENST00000491142 DBF4Q9UBU7 674 aaPredicted RBP10.9□□□□□ -0.66
HPS4-215ENST00000491142 PTPN12Q05209 780 aaKnown RBP10.89□□□□□ -0.67
HPS4-215ENST00000491142 LMOD3Q0VAK6 560 aa10.89□□□□□ -0.67
HPS4-215ENST00000491142 PRKG1Q13976 671 aa10.89□□□□□ -0.67
HPS4-215ENST00000491142 HABP4Q5JVS0 413 aaKnown RBP10.89□□□□□ -0.67
HPS4-215ENST00000491142 ZBTB38Q8NAP3 1195 aaPredicted RBP10.89□□□□□ -0.67
HPS4-215ENST00000491142 GCC1Q96CN9 775 aa10.89□□□□□ -0.67
HPS4-215ENST00000491142 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
HPS4-215ENST00000491142 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 WNT10BO00744 389 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 SREBF2Q12772 1141 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 CCDC152Q4G0S7 254 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 RIC3Q7Z5B4 369 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 PODNQ7Z5L7 613 aa10.88□□□□□ -0.67
HPS4-215ENST00000491142 CFHR5Q9BXR6 569 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms