RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 PKN2Q16513 984 aaKnown RBP26.59■■□□□ 1.85
CLIP2-208ENST00000491075 NBPF9Q3BBW0 867 aa26.59■■□□□ 1.85
CLIP2-208ENST00000491075 DACT2Q5SW24 774 aa26.59■■□□□ 1.85
CLIP2-208ENST00000491075 MOB2Q70IA6 237 aa26.59■■□□□ 1.85
CLIP2-208ENST00000491075 TTLL11Q8NHH1 800 aa26.59■■□□□ 1.85
CLIP2-208ENST00000491075 MINPP1Q9UNW1 487 aa26.59■■□□□ 1.85
CLIP2-208ENST00000491075 SCAF8Q9UPN6 1271 aaKnown RBP26.59■■□□□ 1.85
CLIP2-208ENST00000491075 UBE2Q2LH0YL09 131 aa26.58■■□□□ 1.85
CLIP2-208ENST00000491075 NF2P35240 595 aa26.58■■□□□ 1.85
CLIP2-208ENST00000491075 MMP14P50281 582 aa26.57■■□□□ 1.84
CLIP2-208ENST00000491075 CCT4P50991 539 aaKnown RBP26.57■■□□□ 1.84
CLIP2-208ENST00000491075 TTLL12Q14166 644 aaPredicted RBP26.57■■□□□ 1.84
CLIP2-208ENST00000491075 STRIP1Q5VSL9 837 aa26.57■■□□□ 1.84
CLIP2-208ENST00000491075 KSR2Q6VAB6 950 aa26.57■■□□□ 1.84
CLIP2-208ENST00000491075 GREM2Q9H772 168 aa26.57■■□□□ 1.84
CLIP2-208ENST00000491075 HDAC9Q9UKV0 1011 aa26.57■■□□□ 1.84
CLIP2-208ENST00000491075 HPS5Q9UPZ3 1129 aa26.57■■□□□ 1.84
CLIP2-208ENST00000491075 WTIPA6NIX2 430 aaPredicted RBP26.56■■□□□ 1.84
CLIP2-208ENST00000491075 WNT10BO00744 389 aa26.56■■□□□ 1.84
CLIP2-208ENST00000491075 IGKV5-2P06315 115 aa26.56■■□□□ 1.84
CLIP2-208ENST00000491075 NEXNQ0ZGT2 675 aa26.56■■□□□ 1.84
CLIP2-208ENST00000491075 PRAMEF18Q5VWM3 479 aa26.56■■□□□ 1.84
CLIP2-208ENST00000491075 COA1Q9GZY4 146 aa26.56■■□□□ 1.84
CLIP2-208ENST00000491075 PI4KAP2A4QPH2 592 aa26.55■■□□□ 1.84
CLIP2-208ENST00000491075 NOM1Q5C9Z4 860 aaKnown RBP26.55■■□□□ 1.84
CLIP2-208ENST00000491075 PI4KAP1Q8N8J0 262 aa26.55■■□□□ 1.84
CLIP2-208ENST00000491075 ZNF296Q8WUU4 475 aaPredicted RBP26.55■■□□□ 1.84
CLIP2-208ENST00000491075 FBXW7Q969H0 707 aa26.55■■□□□ 1.84
CLIP2-208ENST00000491075 TBC1D8O95759 1140 aa26.54■■□□□ 1.84
CLIP2-208ENST00000491075 TM4SF4P48230 202 aa26.54■■□□□ 1.84
CLIP2-208ENST00000491075 MXD3Q9BW11 206 aa26.54■■□□□ 1.84
CLIP2-208ENST00000491075 PRKRIP1Q9H875 184 aaPredicted RBP26.53■■□□□ 1.84
CLIP2-208ENST00000491075 LEMD3Q9Y2U8 911 aa26.53■■□□□ 1.84
CLIP2-208ENST00000491075 SREBF2Q12772 1141 aa26.52■■□□□ 1.84
CLIP2-208ENST00000491075 APOBEC3FQ8IUX4 373 aaKnown RBP26.52■■□□□ 1.84
CLIP2-208ENST00000491075 TSPYL6Q8N831 410 aa26.52■■□□□ 1.84
CLIP2-208ENST00000491075 STK31Q9BXU1 1019 aa26.52■■□□□ 1.84
CLIP2-208ENST00000491075 NEURL1BA8MQ27 555 aa26.51■■□□□ 1.83
CLIP2-208ENST00000491075 SASH1O94885 1247 aa26.51■■□□□ 1.83
CLIP2-208ENST00000491075 IGHMBP2P38935 993 aaKnown RBP26.51■■□□□ 1.83
CLIP2-208ENST00000491075 PRPF38BQ5VTL8 546 aaKnown RBP26.51■■□□□ 1.83
CLIP2-208ENST00000491075 ECM29Q5VYK3 1845 aa26.51■■□□□ 1.83
CLIP2-208ENST00000491075 COL1A1P02452 1464 aaPredicted RBP26.5■■□□□ 1.83
CLIP2-208ENST00000491075 GPR25O00155 361 aa26.5■■□□□ 1.83
CLIP2-208ENST00000491075 CWF19L2Q2TBE0 894 aaKnown RBP26.5■■□□□ 1.83
CLIP2-208ENST00000491075 ARMC9Q7Z3E5 817 aa26.5■■□□□ 1.83
CLIP2-208ENST00000491075 ZNF804BA4D1E1 1349 aa26.49■■□□□ 1.83
CLIP2-208ENST00000491075 TTLL5Q6EMB2 1281 aa26.49■■□□□ 1.83
CLIP2-208ENST00000491075 UBE3BQ7Z3V4 1068 aa26.49■■□□□ 1.83
CLIP2-208ENST00000491075 TXNRD3Q86VQ6 643 aa26.49■■□□□ 1.83
CLIP2-208ENST00000491075 CFHR5Q9BXR6 569 aa26.49■■□□□ 1.83
CLIP2-208ENST00000491075 ANKRD2Q9GZV1 360 aa26.49■■□□□ 1.83
CLIP2-208ENST00000491075 LAMB1P07942 1786 aa26.48■■□□□ 1.83
CLIP2-208ENST00000491075 MKRN3Q13064 507 aaKnown RBP26.48■■□□□ 1.83
CLIP2-208ENST00000491075 H7C1W4 665 aa26.47■■□□□ 1.83
CLIP2-208ENST00000491075 PTPN12Q05209 780 aaKnown RBP26.47■■□□□ 1.83
CLIP2-208ENST00000491075 FBXO46Q6PJ61 603 aaPredicted RBP26.47■■□□□ 1.83
CLIP2-208ENST00000491075 KIAA0825Q8IV33 1275 aa26.47■■□□□ 1.83
CLIP2-208ENST00000491075 PLA2G12BQ9BX93 195 aa26.47■■□□□ 1.83
CLIP2-208ENST00000491075 A0A1B0GUL6 1792 aa26.46■■□□□ 1.83
CLIP2-208ENST00000491075 MPHOSPH8Q99549 860 aa26.46■■□□□ 1.83
CLIP2-208ENST00000491075 CACNA1FO60840 1977 aa26.46■■□□□ 1.83
CLIP2-208ENST00000491075 ITGA6P23229 1130 aa26.45■■□□□ 1.82
CLIP2-208ENST00000491075 TSR2Q969E8 191 aaKnown RBP26.45■■□□□ 1.82
CLIP2-208ENST00000491075 ZBED3Q96IU2 234 aaPredicted RBP26.45■■□□□ 1.82
CLIP2-208ENST00000491075 FKTNO75072 461 aa26.44■■□□□ 1.82
CLIP2-208ENST00000491075 KLRK1P26718 216 aa26.44■■□□□ 1.82
CLIP2-208ENST00000491075 GTF2IP78347 998 aa26.44■■□□□ 1.82
CLIP2-208ENST00000491075 PRKG1Q13976 671 aa26.44■■□□□ 1.82
CLIP2-208ENST00000491075 LDLRAD1Q5T700 205 aa26.44■■□□□ 1.82
CLIP2-208ENST00000491075 ALDH1A1P00352 501 aa26.43■■□□□ 1.82
CLIP2-208ENST00000491075 KCNJ4P48050 445 aa26.43■■□□□ 1.82
CLIP2-208ENST00000491075 GCKRQ14397 625 aa26.43■■□□□ 1.82
CLIP2-208ENST00000491075 SPRYD7Q5W111 196 aa26.43■■□□□ 1.82
CLIP2-208ENST00000491075 ANGEL1Q9UNK9 670 aaKnown RBP26.43■■□□□ 1.82
CLIP2-208ENST00000491075 TWISTNBQ3B726 338 aaPredicted RBP26.42■■□□□ 1.82
CLIP2-208ENST00000491075 G2E3Q7L622 706 aa26.42■■□□□ 1.82
CLIP2-208ENST00000491075 MYH16Q9H6N6 1097 aa26.42■■□□□ 1.82
CLIP2-208ENST00000491075 HTTP42858 3142 aa26.42■■□□□ 1.82
CLIP2-208ENST00000491075 CSF1RP07333 972 aa26.41■■□□□ 1.82
CLIP2-208ENST00000491075 SLC4A2P04920 1241 aa26.4■■□□□ 1.82
CLIP2-208ENST00000491075 CASP7P55210 303 aa26.4■■□□□ 1.82
CLIP2-208ENST00000491075 CHRNDQ07001 517 aa26.4■■□□□ 1.82
CLIP2-208ENST00000491075 DLGAP5Q15398 846 aa26.4■■□□□ 1.82
CLIP2-208ENST00000491075 DEFB129Q9H1M3 183 aa26.4■■□□□ 1.82
CLIP2-208ENST00000491075 CD209Q9NNX6 404 aa26.4■■□□□ 1.82
CLIP2-208ENST00000491075 MANSC4A6NHS7 340 aaPredicted RBP26.39■■□□□ 1.82
CLIP2-208ENST00000491075 INHBEP58166 350 aa26.39■■□□□ 1.82
CLIP2-208ENST00000491075 MTMR14Q8NCE2 650 aa26.39■■□□□ 1.82
CLIP2-208ENST00000491075 R3HDMLQ9H3Y0 253 aa26.39■■□□□ 1.82
CLIP2-208ENST00000491075 PPP2R3BQ9Y5P8 575 aa26.39■■□□□ 1.82
CLIP2-208ENST00000491075 SSC5DA1L4H1 1573 aa26.38■■□□□ 1.81
CLIP2-208ENST00000491075 FLIIQ13045 1269 aa26.38■■□□□ 1.81
CLIP2-208ENST00000491075 MAP3K11Q16584 847 aa26.38■■□□□ 1.81
CLIP2-208ENST00000491075 CCDC27Q2M243 656 aa26.38■■□□□ 1.81
CLIP2-208ENST00000491075 ZBTB48P10074 688 aaPredicted RBP26.37■■□□□ 1.81
CLIP2-208ENST00000491075 C15orf52Q6ZUT6 534 aaKnown RBP26.37■■□□□ 1.81
CLIP2-208ENST00000491075 LINS1Q8NG48 757 aa26.37■■□□□ 1.81
CLIP2-208ENST00000491075 SLC10A4Q96EP9 437 aa26.37■■□□□ 1.81
CLIP2-208ENST00000491075 IRS2Q9Y4H2 1338 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms