RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 ZNF589Q86UQ0 364 aaPredicted RBP11.85□□□□□ -0.51
BRD9-209ENST00000490814 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
BRD9-209ENST00000490814 BRF1Q92994 677 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 HIP1O00291 1037 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 EPB41L2O43491 1005 aaKnown RBP11.85□□□□□ -0.51
BRD9-209ENST00000490814 NR1I2O75469 434 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 TDO2P48775 406 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 SYCP1Q15431 976 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 NEUROD6Q96NK8 337 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 NOL10Q9BSC4 688 aaKnown RBP11.85□□□□□ -0.51
BRD9-209ENST00000490814 SASH1O94885 1247 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ARID5BQ14865 1188 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ELF2Q15723 593 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ERCC4Q92889 916 aaPredicted RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 MYD88Q99836 296 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ST7Q9NRC1 585 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 MON2Q7Z3U7 1717 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 ZRSR1Q15695 479 aaKnown RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 GOLGA6L1Q8N7Z2 621 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ZNF397Q8NF99 534 aaPredicted RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 LEO1Q8WVC0 666 aaPredicted RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 DRC1Q96MC2 740 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 SEC62Q99442 399 aaKnown RBP11.84□□□□□ -0.51
BRD9-209ENST00000490814 DONSONQ9NYP3 566 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ADCY9O60503 1353 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 JCADQ9P266 1359 aa11.84□□□□□ -0.51
BRD9-209ENST00000490814 RPS6KB1P23443 525 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 MAP4K1Q92918 833 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.52
BRD9-209ENST00000490814 MAP2K1Q02750 393 aaPredicted RBP11.83□□□□□ -0.52
BRD9-209ENST00000490814 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 GORABQ5T7V8 394 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 Q6ZUG5 572 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 NRKQ7Z2Y5 1582 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 USP27XA6NNY8 438 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 ALDH1L1O75891 902 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 SKILP12757 684 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 CCDC144BQ3MJ40 725 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 CCDC144CPQ8IYA2 1237 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 IP6K1Q92551 441 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 FMNL2Q96PY5 1086 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.528e-6■■■□□ 15.4
BRD9-209ENST00000490814 JRKLQ9Y4A0 524 aa11.83□□□□□ -0.52
BRD9-209ENST00000490814 MYO1CO00159 1063 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
BRD9-209ENST00000490814 AKAP4Q5JQC9 854 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 CHST3Q7LGC8 479 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 LINS1Q8NG48 757 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 NEK1Q96PY6 1258 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 TNS3Q68CZ2 1445 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 TRIM66O15016 1216 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 RNMTO43148 476 aaKnown RBP11.82□□□□□ -0.52
BRD9-209ENST00000490814 SYT10Q6XYQ8 523 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 DDX19AQ9NUU7 478 aaKnown RBP11.82□□□□□ -0.52
BRD9-209ENST00000490814 SH3BP1Q9Y3L3 701 aa11.82□□□□□ -0.52
BRD9-209ENST00000490814 XRN1Q8IZH2 1706 aaKnown RBP11.82□□□□□ -0.52
BRD9-209ENST00000490814 CLSTN1O94985 981 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 ME1P48163 572 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 CCDC73Q6ZRK6 1079 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 USP16Q9Y5T5 823 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 FBXO38Q6PIJ6 1188 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 DEF6Q9H4E7 631 aa11.81□□□□□ -0.52
BRD9-209ENST00000490814 KIF1CO43896 1103 aaKnown RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 TOB2Q14106 344 aaPredicted RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 DNAJC21Q5F1R6 531 aaKnown RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 SDF4Q9BRK5 362 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 POLR3GO15318 223 aaPredicted RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 KINO60870 393 aaKnown RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 TFCP2Q12800 502 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 CXorf56Q9H5V9 222 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 NCOA5Q9HCD5 579 aaKnown RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 SUFUQ9UMX1 484 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 SART3Q15020 963 aaKnown RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 CCAR1Q8IX12 1150 aaKnown RBP11.8□□□□□ -0.52
BRD9-209ENST00000490814 MNS1Q8NEH6 495 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 PGBD1Q96JS3 809 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 RAI14Q9P0K7 980 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 DCCP43146 1447 aa11.8□□□□□ -0.52
BRD9-209ENST00000490814 SETD1AO15047 1707 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms