RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 MRFAP1L1Q96HT8 127 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 DESI2Q9BSY9 194 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 FLT4P35916 1363 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 EDC4Q6P2E9 1401 aaKnown RBP14.74□□□□□ -0.05
SHOX2-205ENST00000490689 N4BP3O15049 544 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 CTR9Q6PD62 1173 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 ETF1P62495 437 aaKnown RBP14.74□□□□□ -0.05
SHOX2-205ENST00000490689 MTX1Q13505 466 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 SMC1AQ14683 1233 aaKnown RBP14.74□□□□□ -0.05
SHOX2-205ENST00000490689 METTL24Q5JXM2 366 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 PI4K2BQ8TCG2 481 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 PAG1Q9NWQ8 432 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 SLC12A7Q9Y666 1083 aa14.74□□□□□ -0.05
SHOX2-205ENST00000490689 CCDC175P0C221 793 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 ZNF589Q86UQ0 364 aaPredicted RBP14.73□□□□□ -0.05
SHOX2-205ENST00000490689 NCOA7Q8NI08 942 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 MINDY4BA8MYZ0 360 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 ADKP55263 362 aaKnown RBP14.73□□□□□ -0.05
SHOX2-205ENST00000490689 ZSCAN26Q16670 478 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 DPCR1Q3MIW9 517 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 UBAC1Q9BSL1 405 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 CTAGE15A4D2H0 777 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 CTAGE8P0CG41 777 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 DNAJC21Q5F1R6 531 aaKnown RBP14.73□□□□□ -0.05
SHOX2-205ENST00000490689 TMEM67Q5HYA8 995 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 CTAGE6Q86UF2 777 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 CTAGE4Q8IX94 777 aa14.73□□□□□ -0.05
SHOX2-205ENST00000490689 TRMT44Q8IYL2 757 aaKnown RBP14.72□□□□□ -0.05
SHOX2-205ENST00000490689 KIAA1468Q9P260 1216 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 FAM107BQ9H098 131 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 ASXL2Q76L83 1435 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 POGZQ7Z3K3 1410 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 TXLNAP40222 546 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 NDUFA8P51970 172 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 MAP4K1Q92918 833 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 CAPZA3Q96KX2 299 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 GDAP1L1Q96MZ0 367 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 NAPBQ9H115 298 aa14.72□□□□□ -0.05
SHOX2-205ENST00000490689 WDHD1O75717 1129 aaPredicted RBP14.71□□□□□ -0.05
SHOX2-205ENST00000490689 GYS2P54840 703 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 PGBD1Q96JS3 809 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 PPP1R13BQ96KQ4 1090 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 DRC1Q96MC2 740 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 PCDHA7Q9UN72 937 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 E9PCH4 1651 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 MADDQ8WXG6 1647 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 PLXNC1O60486 1568 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 AP5Z1O43299 807 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 RAD21O60216 631 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 CLCN6P51797 869 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 MNAT1P51948 309 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 SSRP1Q08945 709 aaKnown RBP14.71□□□□□ -0.05
SHOX2-205ENST00000490689 LONRF3Q496Y0 759 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 CLTCL1P53675 1640 aa14.71□□□□□ -0.05
SHOX2-205ENST00000490689 MICALL1Q8N3F8 863 aa14.71□□□□□ -0.06
SHOX2-205ENST00000490689 TTC14Q96N46 770 aa14.71□□□□□ -0.06
SHOX2-205ENST00000490689 ZCCHC17Q9NP64 241 aaKnown RBP14.71□□□□□ -0.06
SHOX2-205ENST00000490689 HNRNPH2P55795 449 aaKnown RBP14.7□□□□□ -0.06
SHOX2-205ENST00000490689 AMOTQ4VCS5 1084 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 DHX58Q96C10 678 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 EPC1Q9H2F5 836 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 JADE2Q9NQC1 790 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 HOXC9P31274 260 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 SCRN1Q12765 414 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 ENOX2Q16206 610 aaKnown RBP14.7□□□□□ -0.06
SHOX2-205ENST00000490689 ANO1Q5XXA6 986 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 MYOM2P54296 1465 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 ELP1O95163 1332 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
SHOX2-205ENST00000490689 PPARDQ03181 441 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 FKBP15Q5T1M5 1219 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 IMPACTQ9P2X3 320 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 SHTN1A0MZ66 631 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 CTAGE9A4FU28 777 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 EVA1CP58658 441 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 PNOCQ13519 176 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 BEND3Q5T5X7 828 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 NACAP1Q9BZK3 213 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 ABCF2Q9UG63 623 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
SHOX2-205ENST00000490689 CHMP4BP1P59074 171 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 RPAP1Q9BWH6 1393 aaPredicted RBP14.69□□□□□ -0.06
SHOX2-205ENST00000490689 ZBTB43O43298 467 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 MAP9Q49MG5 647 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 RNF187Q5TA31 235 aaPredicted RBP14.69□□□□□ -0.06
SHOX2-205ENST00000490689 CROCC2H7BZ55 1655 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 IQGAP3Q86VI3 1631 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 ZNF827Q17R98 1081 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 TNNI3KQ59H18 835 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 NFE2L3Q9Y4A8 694 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 FPGT-TNNI3KV9GXZ4 949 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 IQSEC2Q5JU85 1478 aa14.69□□□□□ -0.06
SHOX2-205ENST00000490689 TUBB4AP04350 444 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 NLRP12P59046 1061 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 NECTIN1Q15223 517 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 ODF2Q5BJF6 829 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 WASF1Q92558 559 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms