RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 ZC3H12CQ9C0D7 883 aaKnown RBP15.39■□□□□ 0.05
HDAC1-210ENST00000490081 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
HDAC1-210ENST00000490081 KIF3CO14782 793 aa15.38■□□□□ 0.05
HDAC1-210ENST00000490081 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
HDAC1-210ENST00000490081 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
HDAC1-210ENST00000490081 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
HDAC1-210ENST00000490081 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
HDAC1-210ENST00000490081 ZNF526Q8TF50 670 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-210ENST00000490081 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
HDAC1-210ENST00000490081 ZC3H4Q9UPT8 1303 aaKnown RBP15.38■□□□□ 0.05
HDAC1-210ENST00000490081 SLC5A1P13866 664 aa15.37■□□□□ 0.05
HDAC1-210ENST00000490081 KCNJ4P48050 445 aa15.37■□□□□ 0.05
HDAC1-210ENST00000490081 PODNQ7Z5L7 613 aa15.37■□□□□ 0.05
HDAC1-210ENST00000490081 CLASRPQ8N2M8 674 aaKnown RBP15.37■□□□□ 0.05
HDAC1-210ENST00000490081 COA1Q9GZY4 146 aa15.37■□□□□ 0.05
HDAC1-210ENST00000490081 PPP4R2Q9NY27 417 aa15.37■□□□□ 0.05
HDAC1-210ENST00000490081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-210ENST00000490081 A0A1B0GUL7 405 aa15.36■□□□□ 0.05
HDAC1-210ENST00000490081 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-210ENST00000490081 PRELPP51888 382 aa15.36■□□□□ 0.05
HDAC1-210ENST00000490081 ZNF512BQ96KM6 892 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-210ENST00000490081 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-210ENST00000490081 ZNF609O15014 1411 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 SNAP23O00161 211 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 PPIP5K2O43314 1243 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 IL1R1P14778 569 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 TIMM10P62072 90 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 CAVIN4Q5BKX8 364 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 ZNF804AQ7Z570 1209 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 EAF2Q96CJ1 260 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-210ENST00000490081 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-210ENST00000490081 KDM2BQ8NHM5 1336 aa15.35■□□□□ 0.05
HDAC1-210ENST00000490081 PSME4Q14997 1843 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 FZD9O00144 591 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 SEMA3EO15041 775 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 HIBADHP31937 336 aaKnown RBP15.34■□□□□ 0.05
HDAC1-210ENST00000490081 NUCB1Q02818 461 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 RASSF7Q02833 373 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 AOC3Q16853 763 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 CENPQQ7L2Z9 268 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-210ENST00000490081 LARGE2Q8N3Y3 721 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 TDRD7Q8NHU6 1098 aaKnown RBP15.34■□□□□ 0.05
HDAC1-210ENST00000490081 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 XAGE2Q96GT9 111 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 ZNRF3Q9ULT6 936 aa15.34■□□□□ 0.05
HDAC1-210ENST00000490081 CD209Q9NNX6 404 aa15.33■□□□□ 0.04
HDAC1-210ENST00000490081 PDS5AQ29RF7 1337 aaKnown RBP15.33■□□□□ 0.04
HDAC1-210ENST00000490081 RIMBP2O15034 1052 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 KLRK1P26718 216 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 ANKRD45Q5TZF3 282 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 C9orf131Q5VYM1 1079 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 CCDC136Q96JN2 1154 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 IL1RAPL2Q9NP60 686 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 GNL3LQ9NVN8 582 aaKnown RBP15.32■□□□□ 0.04
HDAC1-210ENST00000490081 COL4A5P29400 1685 aa15.32■□□□□ 0.04
HDAC1-210ENST00000490081 IGSF3O75054 1194 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
HDAC1-210ENST00000490081 HSPA6P17066 643 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 ARID4AP29374 1257 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-210ENST00000490081 BCAMP50895 628 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 FKBP1AP62942 108 aaKnown RBP15.31■□□□□ 0.04
HDAC1-210ENST00000490081 CCDC158Q5M9N0 1113 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 CCDC102BQ68D86 513 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 AACSQ86V21 672 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 CHD1LQ86WJ1 897 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.31■□□□□ 0.04
HDAC1-210ENST00000490081 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-210ENST00000490081 DBNLQ9UJU6 430 aaKnown RBP15.31■□□□□ 0.04
HDAC1-210ENST00000490081 FAM205AQ6ZU69 1335 aa15.31■□□□□ 0.04
HDAC1-210ENST00000490081 ECE2O60344 883 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 ADORA1P30542 326 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 GYG1P46976 350 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 MMP14P50281 582 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 VPS37DQ86XT2 251 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
HDAC1-210ENST00000490081 DBNDD2Q9BQY9 259 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 RNF181Q9P0P0 153 aa15.3■□□□□ 0.04
HDAC1-210ENST00000490081 SCN9AQ15858 1988 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 SALL3Q9BXA9 1300 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 YDJCA8MPS7 323 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 G3V3G9 751 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 STRIP1Q5VSL9 837 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 CCDC8Q9H0W5 538 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-210ENST00000490081 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 DENND2AQ9ULE3 1009 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
HDAC1-210ENST00000490081 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-210ENST00000490081 TTC41PQ6P2S7 1318 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 APBB1O00213 710 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 SMARCA5O60264 1052 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-210ENST00000490081 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
HDAC1-210ENST00000490081 ATP5JP18859 108 aa15.28■□□□□ 0.04
HDAC1-210ENST00000490081 PHKA1P46020 1223 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms