RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 TNRC6CQ9HCJ0 1690 aaKnown RBP14.15□□□□□ -0.14
TRIM40-208ENST00000489892 REC8O95072 547 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 KCNJ4P48050 445 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 CHRNDQ07001 517 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 RUFY2Q8WXA3 655 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 RILPL2Q969X0 211 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 KLRG1Q96E93 195 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
TRIM40-208ENST00000489892 SPEF2Q9C093 1822 aa14.15□□□□□ -0.14
TRIM40-208ENST00000489892 CELF1Q92879 486 aaKnown RBP14.14□□□□□ -0.15
TRIM40-208ENST00000489892 XAGE2Q96GT9 111 aa14.14□□□□□ -0.15
TRIM40-208ENST00000489892 MASTLQ96GX5 879 aa14.14□□□□□ -0.15
TRIM40-208ENST00000489892 HAUS7Q99871 368 aa14.14□□□□□ -0.15
TRIM40-208ENST00000489892 MINPP1Q9UNW1 487 aa14.14□□□□□ -0.15
TRIM40-208ENST00000489892 ARAP2Q8WZ64 1704 aa14.14□□□□□ -0.15
TRIM40-208ENST00000489892 AK9Q5TCS8 1911 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 H0YIN7 160 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 FGFR2P21802 821 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 TIMM10P62072 90 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 CAVIN4Q5BKX8 364 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 STYK1Q6J9G0 422 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 TBC1D9Q6ZT07 1266 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 TLR7Q9NYK1 1049 aaKnown RBP14.13□□□□□ -0.15
TRIM40-208ENST00000489892 LEMD3Q9Y2U8 911 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 XDHP47989 1333 aa14.13□□□□□ -0.15
TRIM40-208ENST00000489892 EPB41L2O43491 1005 aaKnown RBP14.12□□□□□ -0.15
TRIM40-208ENST00000489892 SRGNP10124 158 aa14.12□□□□□ -0.15
TRIM40-208ENST00000489892 NBR1Q14596 966 aa14.12□□□□□ -0.15
TRIM40-208ENST00000489892 TTF1Q15361 905 aaPredicted RBP14.12□□□□□ -0.15
TRIM40-208ENST00000489892 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
TRIM40-208ENST00000489892 DIAPH3Q9NSV4 1193 aa14.12□□□□□ -0.15
TRIM40-208ENST00000489892 KIF13BQ9NQT8 1826 aa14.12□□□□□ -0.15
TRIM40-208ENST00000489892 SEMA3EO15041 775 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 ZBTB22O15209 634 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 IGSF3O75054 1194 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
TRIM40-208ENST00000489892 HTRA3P83110 453 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 GRIPAP1Q4V328 841 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 VPS37DQ86XT2 251 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 CNKSR1Q969H4 720 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 FSD1Q9BTV5 496 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 BOLA2Q9H3K6 86 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 ANKIB1Q9P2G1 1089 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.11□□□□□ -0.15
TRIM40-208ENST00000489892 RAD50Q92878 1312 aa14.11□□□□□ -0.15
TRIM40-208ENST00000489892 ANKRD31Q8N7Z5 1873 aa14.1□□□□□ -0.15
TRIM40-208ENST00000489892 PPEF1O14829 653 aaPredicted RBP14.1□□□□□ -0.15
TRIM40-208ENST00000489892 ATP2B4P23634 1241 aa14.1□□□□□ -0.15
TRIM40-208ENST00000489892 ARID4AP29374 1257 aaPredicted RBP14.1□□□□□ -0.15
TRIM40-208ENST00000489892 ZSCAN25Q6NSZ9 544 aa14.1□□□□□ -0.15
TRIM40-208ENST00000489892 C2CD5Q86YS7 1000 aa14.1□□□□□ -0.15
TRIM40-208ENST00000489892 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRIM40-208ENST00000489892 PAG1Q9NWQ8 432 aa14.1□□□□□ -0.15
TRIM40-208ENST00000489892 C10orf71Q711Q0 1435 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 ZFYP08048 801 aaPredicted RBP14.09□□□□□ -0.15
TRIM40-208ENST00000489892 CHMLP26374 656 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 CCDC102BQ68D86 513 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 CC2D2BQ6DHV5 1058 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 TMED8Q6PL24 325 aaPredicted RBP14.09□□□□□ -0.15
TRIM40-208ENST00000489892 SP8Q8IXZ3 490 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 KBTBD3Q8NAB2 608 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 HELBQ8NG08 1087 aaPredicted RBP14.09□□□□□ -0.15
TRIM40-208ENST00000489892 DNAJC2Q99543 621 aaKnown RBP14.09□□□□□ -0.15
TRIM40-208ENST00000489892 ZNF804BA4D1E1 1349 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 A0A1B0GUL6 1792 aa14.09□□□□□ -0.15
TRIM40-208ENST00000489892 TAF5LO75529 589 aa14.08□□□□□ -0.16
TRIM40-208ENST00000489892 ADORA1P30542 326 aa14.08□□□□□ -0.16
TRIM40-208ENST00000489892 KIAA1211Q6ZU35 1233 aa14.08□□□□□ -0.16
TRIM40-208ENST00000489892 C15orf52Q6ZUT6 534 aaKnown RBP14.08□□□□□ -0.16
TRIM40-208ENST00000489892 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
TRIM40-208ENST00000489892 GGA1Q9UJY5 639 aa14.08□□□□□ -0.16
TRIM40-208ENST00000489892 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
TRIM40-208ENST00000489892 ATP6V0A2Q9Y487 856 aa14.08□□□□□ -0.16
TRIM40-208ENST00000489892 PDS5AQ29RF7 1337 aaKnown RBP14.08□□□□□ -0.16
TRIM40-208ENST00000489892 KIAA1551Q9HCM1 1747 aa14.07□□□□□ -0.16
TRIM40-208ENST00000489892 MCCP23508 829 aa14.07□□□□□ -0.16
TRIM40-208ENST00000489892 MFAP1P55081 439 aaKnown RBP14.07□□□□□ -0.16
TRIM40-208ENST00000489892 TGFB2P61812 414 aa14.07□□□□□ -0.16
TRIM40-208ENST00000489892 IL27Q8NEV9 243 aa14.07□□□□□ -0.16
TRIM40-208ENST00000489892 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
TRIM40-208ENST00000489892 DENND2AQ9ULE3 1009 aa14.07□□□□□ -0.16
TRIM40-208ENST00000489892 LRRC37AA6NMS7 1700 aa14.07□□□□□ -0.16
TRIM40-208ENST00000489892 GOLIM4O00461 696 aa14.06□□□□□ -0.16
TRIM40-208ENST00000489892 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM40-208ENST00000489892 ZNF804AQ7Z570 1209 aa14.06□□□□□ -0.16
TRIM40-208ENST00000489892 ZNF622Q969S3 477 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM40-208ENST00000489892 A0A0G2JLW4 131 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 MAP4K4O95819 1239 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-208ENST00000489892 HIBADHP31937 336 aaKnown RBP14.05□□□□□ -0.16
TRIM40-208ENST00000489892 PHKA1P46020 1223 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 SPATA5Q8NB90 893 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 TBC1D32Q96NH3 1257 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 EYA3Q99504 573 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 C22orf23Q9BZE7 217 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
TRIM40-208ENST00000489892 TAF1P21675 1872 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms