RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 TM4SF4P48230 202 aa28.73■■■□□ 2.19
HOXA9-205ENST00000489695 PRAMEF18Q5VWM3 479 aa28.73■■■□□ 2.19
HOXA9-205ENST00000489695 TTLL11Q8NHH1 800 aa28.73■■■□□ 2.19
HOXA9-205ENST00000489695 NOM1Q5C9Z4 860 aaKnown RBP28.72■■■□□ 2.19
HOXA9-205ENST00000489695 ZNF296Q8WUU4 475 aaPredicted RBP28.72■■■□□ 2.19
HOXA9-205ENST00000489695 CHMP4AQ9BY43 222 aa28.72■■■□□ 2.19
HOXA9-205ENST00000489695 MAP3K2Q9Y2U5 619 aa28.72■■■□□ 2.19
HOXA9-205ENST00000489695 WNT10BO00744 389 aa28.71■■■□□ 2.19
HOXA9-205ENST00000489695 TBC1D8O95759 1140 aa28.71■■■□□ 2.19
HOXA9-205ENST00000489695 IGKV5-2P06315 115 aa28.71■■■□□ 2.19
HOXA9-205ENST00000489695 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
HOXA9-205ENST00000489695 CCDC30Q5VVM6 783 aa28.71■■■□□ 2.19
HOXA9-205ENST00000489695 OGFOD1Q8N543 542 aa28.71■■■□□ 2.19
HOXA9-205ENST00000489695 MXD3Q9BW11 206 aa28.71■■■□□ 2.19
HOXA9-205ENST00000489695 PRKRIP1Q9H875 184 aaPredicted RBP28.71■■■□□ 2.19
HOXA9-205ENST00000489695 APAF1O14727 1248 aa28.7■■■□□ 2.18
HOXA9-205ENST00000489695 MMP14P50281 582 aa28.7■■■□□ 2.18
HOXA9-205ENST00000489695 STRIP1Q5VSL9 837 aa28.7■■■□□ 2.18
HOXA9-205ENST00000489695 GREM2Q9H772 168 aa28.7■■■□□ 2.18
HOXA9-205ENST00000489695 MYO3BQ8WXR4 1341 aa28.69■■■□□ 2.18
HOXA9-205ENST00000489695 CCT4P50991 539 aaKnown RBP28.69■■■□□ 2.18
HOXA9-205ENST00000489695 KSR2Q6VAB6 950 aa28.69■■■□□ 2.18
HOXA9-205ENST00000489695 COA1Q9GZY4 146 aa28.69■■■□□ 2.18
HOXA9-205ENST00000489695 HDAC9Q9UKV0 1011 aa28.69■■■□□ 2.18
HOXA9-205ENST00000489695 PRPF38BQ5VTL8 546 aaKnown RBP28.68■■■□□ 2.18
HOXA9-205ENST00000489695 ZNF646O15015 1829 aaPredicted RBP28.67■■■□□ 2.18
HOXA9-205ENST00000489695 TTLL12Q14166 644 aaPredicted RBP28.67■■■□□ 2.18
HOXA9-205ENST00000489695 PI4KAP2A4QPH2 592 aa28.66■■■□□ 2.18
HOXA9-205ENST00000489695 GPR25O00155 361 aa28.66■■■□□ 2.18
HOXA9-205ENST00000489695 NF2P35240 595 aa28.66■■■□□ 2.18
HOXA9-205ENST00000489695 PI4KAP1Q8N8J0 262 aa28.66■■■□□ 2.18
HOXA9-205ENST00000489695 CFHR5Q9BXR6 569 aa28.66■■■□□ 2.18
HOXA9-205ENST00000489695 TXNRD3Q86VQ6 643 aa28.65■■■□□ 2.18
HOXA9-205ENST00000489695 LEMD3Q9Y2U8 911 aa28.65■■■□□ 2.18
HOXA9-205ENST00000489695 TSPYL6Q8N831 410 aa28.64■■■□□ 2.18
HOXA9-205ENST00000489695 PTPN12Q05209 780 aaKnown RBP28.63■■■□□ 2.17
HOXA9-205ENST00000489695 SREBF2Q12772 1141 aa28.63■■■□□ 2.17
HOXA9-205ENST00000489695 FBXW7Q969H0 707 aa28.63■■■□□ 2.17
HOXA9-205ENST00000489695 NEURL1BA8MQ27 555 aa28.62■■■□□ 2.17
HOXA9-205ENST00000489695 H7C1W4 665 aa28.62■■■□□ 2.17
HOXA9-205ENST00000489695 SASH1O94885 1247 aa28.62■■■□□ 2.17
HOXA9-205ENST00000489695 NEXNQ0ZGT2 675 aa28.62■■■□□ 2.17
HOXA9-205ENST00000489695 CWF19L2Q2TBE0 894 aaKnown RBP28.62■■■□□ 2.17
HOXA9-205ENST00000489695 LDLRAD1Q5T700 205 aa28.62■■■□□ 2.17
HOXA9-205ENST00000489695 TTLL5Q6EMB2 1281 aa28.62■■■□□ 2.17
HOXA9-205ENST00000489695 FBXO46Q6PJ61 603 aaPredicted RBP28.62■■■□□ 2.17
HOXA9-205ENST00000489695 ZBED3Q96IU2 234 aaPredicted RBP28.62■■■□□ 2.17
HOXA9-205ENST00000489695 MKRN3Q13064 507 aaKnown RBP28.61■■■□□ 2.17
HOXA9-205ENST00000489695 ARMC9Q7Z3E5 817 aa28.61■■■□□ 2.17
HOXA9-205ENST00000489695 APOBEC3FQ8IUX4 373 aaKnown RBP28.61■■■□□ 2.17
HOXA9-205ENST00000489695 MYH3P11055 1940 aa28.6■■■□□ 2.17
HOXA9-205ENST00000489695 ZNF804BA4D1E1 1349 aa28.6■■■□□ 2.17
HOXA9-205ENST00000489695 IGHMBP2P38935 993 aaKnown RBP28.59■■■□□ 2.17
HOXA9-205ENST00000489695 PLA2G12BQ9BX93 195 aa28.59■■■□□ 2.17
HOXA9-205ENST00000489695 ANKRD2Q9GZV1 360 aa28.59■■■□□ 2.17
HOXA9-205ENST00000489695 R3HDMLQ9H3Y0 253 aa28.59■■■□□ 2.17
HOXA9-205ENST00000489695 HTTP42858 3142 aa28.59■■■□□ 2.17
HOXA9-205ENST00000489695 SPEF2Q9C093 1822 aa28.59■■■□□ 2.17
HOXA9-205ENST00000489695 FKTNO75072 461 aa28.58■■■□□ 2.17
HOXA9-205ENST00000489695 KLRK1P26718 216 aa28.58■■■□□ 2.17
HOXA9-205ENST00000489695 SPRYD7Q5W111 196 aa28.58■■■□□ 2.17
HOXA9-205ENST00000489695 UBE3BQ7Z3V4 1068 aa28.58■■■□□ 2.17
HOXA9-205ENST00000489695 KIAA0825Q8IV33 1275 aa28.58■■■□□ 2.17
HOXA9-205ENST00000489695 ITGA6P23229 1130 aa28.56■■■□□ 2.16
HOXA9-205ENST00000489695 PRKG1Q13976 671 aa28.56■■■□□ 2.16
HOXA9-205ENST00000489695 STK31Q9BXU1 1019 aa28.56■■■□□ 2.16
HOXA9-205ENST00000489695 ALDH1A1P00352 501 aa28.55■■■□□ 2.16
HOXA9-205ENST00000489695 CSF1RP07333 972 aa28.55■■■□□ 2.16
HOXA9-205ENST00000489695 GTF2IP78347 998 aa28.55■■■□□ 2.16
HOXA9-205ENST00000489695 COL1A1P02452 1464 aaPredicted RBP28.54■■■□□ 2.16
HOXA9-205ENST00000489695 GCKRQ14397 625 aa28.54■■■□□ 2.16
HOXA9-205ENST00000489695 G2E3Q7L622 706 aa28.54■■■□□ 2.16
HOXA9-205ENST00000489695 DEFB129Q9H1M3 183 aa28.54■■■□□ 2.16
HOXA9-205ENST00000489695 ANGEL1Q9UNK9 670 aaKnown RBP28.54■■■□□ 2.16
HOXA9-205ENST00000489695 CASP7P55210 303 aa28.53■■■□□ 2.16
HOXA9-205ENST00000489695 INHBEP58166 350 aa28.53■■■□□ 2.16
HOXA9-205ENST00000489695 MAP3K11Q16584 847 aa28.53■■■□□ 2.16
HOXA9-205ENST00000489695 TSR2Q969E8 191 aaKnown RBP28.53■■■□□ 2.16
HOXA9-205ENST00000489695 MPHOSPH8Q99549 860 aa28.53■■■□□ 2.16
HOXA9-205ENST00000489695 CD209Q9NNX6 404 aa28.53■■■□□ 2.16
HOXA9-205ENST00000489695 MKI67P46013 3256 aaKnown RBP28.53■■■□□ 2.16
HOXA9-205ENST00000489695 MTMR14Q8NCE2 650 aa28.52■■■□□ 2.16
HOXA9-205ENST00000489695 IRS2Q9Y4H2 1338 aa28.51■■■□□ 2.15
HOXA9-205ENST00000489695 SLC4A2P04920 1241 aa28.51■■■□□ 2.15
HOXA9-205ENST00000489695 CHRNDQ07001 517 aa28.51■■■□□ 2.15
HOXA9-205ENST00000489695 FZD1Q9UP38 647 aa28.51■■■□□ 2.15
HOXA9-205ENST00000489695 CENPFP49454 3210 aa28.5■■■□□ 2.15
HOXA9-205ENST00000489695 MANSC4A6NHS7 340 aaPredicted RBP28.5■■■□□ 2.15
HOXA9-205ENST00000489695 DLGAP5Q15398 846 aa28.5■■■□□ 2.15
HOXA9-205ENST00000489695 IFNL1Q8IU54 200 aa28.5■■■□□ 2.15
HOXA9-205ENST00000489695 CERS5Q8N5B7 392 aa28.5■■■□□ 2.15
HOXA9-205ENST00000489695 SLC10A4Q96EP9 437 aa28.5■■■□□ 2.15
HOXA9-205ENST00000489695 ZBTB48P10074 688 aaPredicted RBP28.49■■■□□ 2.15
HOXA9-205ENST00000489695 KCNJ4P48050 445 aa28.49■■■□□ 2.15
HOXA9-205ENST00000489695 TWISTNBQ3B726 338 aaPredicted RBP28.49■■■□□ 2.15
HOXA9-205ENST00000489695 C15orf52Q6ZUT6 534 aaKnown RBP28.49■■■□□ 2.15
HOXA9-205ENST00000489695 PPP2R3BQ9Y5P8 575 aa28.49■■■□□ 2.15
HOXA9-205ENST00000489695 UNCXA6NJT0 531 aa28.48■■■□□ 2.15
HOXA9-205ENST00000489695 SSC5DA1L4H1 1573 aa28.48■■■□□ 2.15
HOXA9-205ENST00000489695 CCDC27Q2M243 656 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms