RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ERC1Q8IUD2 1116 aa11.7□□□□□ -0.54
NOD1-208ENST00000489614 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
NOD1-208ENST00000489614 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
NOD1-208ENST00000489614 ABCC12Q96J65 1359 aa11.7□□□□□ -0.54
NOD1-208ENST00000489614 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 TTC12Q9H892 705 aaPredicted RBP11.69□□□□□ -0.54
NOD1-208ENST00000489614 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 TTC41PQ6P2S7 1318 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 TULP2O00295 520 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 TRIM37O94972 964 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
NOD1-208ENST00000489614 CTSWP56202 376 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 LMBR1LQ6UX01 489 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 ARHGEF1Q92888 912 aaKnown RBP11.69□□□□□ -0.54
NOD1-208ENST00000489614 CALCOCO1Q9P1Z2 691 aa11.69□□□□□ -0.54
NOD1-208ENST00000489614 FEZ2Q9UHY8 353 aaPredicted RBP11.69□□□□□ -0.54
NOD1-208ENST00000489614 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
NOD1-208ENST00000489614 GABPB1Q06547 395 aaPredicted RBP11.68□□□□□ -0.54
NOD1-208ENST00000489614 TERF2Q15554 542 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 FEZ1Q99689 392 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
NOD1-208ENST00000489614 PDE8AO60658 829 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
NOD1-208ENST00000489614 ZNF445P59923 1031 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 TBC1D9BQ66K14 1250 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 FAM89AQ96GI7 184 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 SYCE3A1L190 88 aa11.68□□□□□ -0.54
NOD1-208ENST00000489614 GEMIN8Q9NWZ8 242 aaKnown RBP11.68□□□□□ -0.54
NOD1-208ENST00000489614 BAG4O95429 457 aaKnown RBP11.67□□□□□ -0.54
NOD1-208ENST00000489614 MX1P20591 662 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 DDIT3P35638 169 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 GPATCH11Q8N954 259 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 KLHDC4Q8TBB5 520 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 IL17RAQ96F46 866 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 PTMSP20962 102 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 TM4SF1P30408 202 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
NOD1-208ENST00000489614 RIPOR2Q9Y4F9 1068 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 PSME4Q14997 1843 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
NOD1-208ENST00000489614 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 GTF2A1P52655 376 aaPredicted RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 CAMKK2Q96RR4 588 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 UTP14AQ9BVJ6 771 aaKnown RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 GNPATO15228 680 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 SMIM5Q71RC9 77 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 ILDR1Q86SU0 546 aaPredicted RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 ZNF652Q9Y2D9 606 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 SDSP20132 328 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 GPTP24298 496 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
NOD1-208ENST00000489614 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
NOD1-208ENST00000489614 CARMIL3Q8ND23 1372 aa11.65□□□□□ -0.54
NOD1-208ENST00000489614 EYA2O00167 538 aa11.65□□□□□ -0.54
NOD1-208ENST00000489614 HMGB2P26583 209 aaKnown RBP11.65□□□□□ -0.54
NOD1-208ENST00000489614 DUOX1Q9NRD9 1551 aa11.65□□□□□ -0.54
NOD1-208ENST00000489614 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
NOD1-208ENST00000489614 GYS1P13807 737 aa11.65□□□□□ -0.54
NOD1-208ENST00000489614 NAA30Q147X3 362 aaPredicted RBP11.65□□□□□ -0.54
NOD1-208ENST00000489614 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
NOD1-208ENST00000489614 GREM2Q9H772 168 aa11.65□□□□□ -0.54
NOD1-208ENST00000489614 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
NOD1-208ENST00000489614 IRS2Q9Y4H2 1338 aa11.65□□□□□ -0.55
NOD1-208ENST00000489614 C3orf67Q6ZVT6 689 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 TLR7Q9NYK1 1049 aaKnown RBP11.64□□□□□ -0.55
NOD1-208ENST00000489614 CDK5RAP2Q96SN8 1893 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 IL15P40933 162 aaPredicted RBP11.64□□□□□ -0.55
NOD1-208ENST00000489614 GYS2P54840 703 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 HNRNPH2P55795 449 aaKnown RBP11.64□□□□□ -0.55
NOD1-208ENST00000489614 CHAF1AQ13111 956 aaPredicted RBP11.64□□□□□ -0.55
NOD1-208ENST00000489614 LRRC24Q50LG9 513 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 TBC1D9Q6ZT07 1266 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 ANKRD7Q92527 254 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 ST7Q9NRC1 585 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
NOD1-208ENST00000489614 FOCADQ5VW36 1801 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 CCDC88AQ3V6T2 1871 aa11.64□□□□□ -0.55
NOD1-208ENST00000489614 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
NOD1-208ENST00000489614 CD2BP2O95400 341 aaKnown RBP11.63□□□□□ -0.55
NOD1-208ENST00000489614 FGFR2P21802 821 aa11.63□□□□□ -0.55
NOD1-208ENST00000489614 TFCP2Q12800 502 aa11.63□□□□□ -0.55
NOD1-208ENST00000489614 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.63□□□□□ -0.55
NOD1-208ENST00000489614 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.55
NOD1-208ENST00000489614 TRMT112Q9UI30 125 aaKnown RBP11.63□□□□□ -0.55
NOD1-208ENST00000489614 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
NOD1-208ENST00000489614 TNNT1P13805 278 aa11.63□□□□□ -0.55
NOD1-208ENST00000489614 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms