RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RLBP1P12271 317 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 METTL24Q5JXM2 366 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 CHADLQ6NUI6 762 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.06
MDC1-206ENST00000489540 USP17L1Q7RTZ2 530 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 ITPRIPQ8IWB1 547 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 ADARB2Q9NS39 739 aaKnown RBP21.64■■□□□ 1.06
MDC1-206ENST00000489540 H7C1D1 291 aa21.63■■□□□ 1.05
MDC1-206ENST00000489540 KLRK1P26718 216 aa21.63■■□□□ 1.05
MDC1-206ENST00000489540 MTX1Q13505 466 aa21.63■■□□□ 1.05
MDC1-206ENST00000489540 CNOT7Q9UIV1 285 aaKnown RBP21.63■■□□□ 1.05
MDC1-206ENST00000489540 ZBTB12Q9Y330 459 aaPredicted RBP21.63■■□□□ 1.05
MDC1-206ENST00000489540 PDE8BO95263 885 aa21.63■■□□□ 1.05
MDC1-206ENST00000489540 HSPA6P17066 643 aa21.63■■□□□ 1.05
MDC1-206ENST00000489540 YTHDC1Q96MU7 727 aaKnown RBP21.63■■□□□ 1.05
MDC1-206ENST00000489540 CLEC11AQ9Y240 323 aa21.63■■□□□ 1.05
MDC1-206ENST00000489540 IRS2Q9Y4H2 1338 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 ZBTB7BO15156 539 aaPredicted RBP21.62■■□□□ 1.05
MDC1-206ENST00000489540 SRGAP3O43295 1099 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 CIAO1O76071 339 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 POTEIP0CG38 1075 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 POTEJP0CG39 1038 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 RSBN1LQ6PCB5 846 aaPredicted RBP21.62■■□□□ 1.05
MDC1-206ENST00000489540 ZNF804AQ7Z570 1209 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 AGBL3Q8NEM8 1001 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 CD209Q9NNX6 404 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 SCN4AP35499 1836 aa21.62■■□□□ 1.05
MDC1-206ENST00000489540 STRIP1Q5VSL9 837 aa21.61■■□□□ 1.05
MDC1-206ENST00000489540 MICALL2Q8IY33 904 aa21.61■■□□□ 1.05
MDC1-206ENST00000489540 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.61■■□□□ 1.05
MDC1-206ENST00000489540 PANK1Q8TE04 598 aa21.61■■□□□ 1.05
MDC1-206ENST00000489540 COPRSQ9NQ92 184 aa21.61■■□□□ 1.05
MDC1-206ENST00000489540 VGLL2Q8N8G2 317 aa21.6■■□□□ 1.05
MDC1-206ENST00000489540 TTLL5Q6EMB2 1281 aa21.59■■□□□ 1.05
MDC1-206ENST00000489540 ATG9AQ7Z3C6 839 aa21.59■■□□□ 1.05
MDC1-206ENST00000489540 SPEF2Q9C093 1822 aa21.58■■□□□ 1.05
MDC1-206ENST00000489540 IL1R1P14778 569 aa21.58■■□□□ 1.05
MDC1-206ENST00000489540 IL15P40933 162 aaPredicted RBP21.58■■□□□ 1.05
MDC1-206ENST00000489540 SIL1Q9H173 461 aa21.58■■□□□ 1.05
MDC1-206ENST00000489540 CEP126Q9P2H0 1117 aa21.58■■□□□ 1.05
MDC1-206ENST00000489540 HIBADHP31937 336 aaKnown RBP21.57■■□□□ 1.04
MDC1-206ENST00000489540 APLP1P51693 650 aa21.57■■□□□ 1.04
MDC1-206ENST00000489540 PUM3Q15397 648 aaKnown RBP21.57■■□□□ 1.04
MDC1-206ENST00000489540 DACT2Q5SW24 774 aa21.57■■□□□ 1.04
MDC1-206ENST00000489540 FBXW7Q969H0 707 aa21.57■■□□□ 1.04
MDC1-206ENST00000489540 FAM84BQ96KN1 310 aaPredicted RBP21.57■■□□□ 1.04
MDC1-206ENST00000489540 GMLQ99445 158 aa21.57■■□□□ 1.04
MDC1-206ENST00000489540 PA2G4Q9UQ80 394 aaKnown RBP21.57■■□□□ 1.04
MDC1-206ENST00000489540 MYO3BQ8WXR4 1341 aa21.57■■□□□ 1.04
MDC1-206ENST00000489540 IFIT1P09914 478 aaKnown RBP21.56■■□□□ 1.04
MDC1-206ENST00000489540 GTF2IP78347 998 aa21.56■■□□□ 1.04
MDC1-206ENST00000489540 CAVIN4Q5BKX8 364 aa21.56■■□□□ 1.04
MDC1-206ENST00000489540 ZC3H15Q8WU90 426 aaKnown RBP21.56■■□□□ 1.04
MDC1-206ENST00000489540 ZNF609O15014 1411 aa21.56■■□□□ 1.04
MDC1-206ENST00000489540 USP17L8P0C7I0 530 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 FGFR2P21802 821 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 MMP14P50281 582 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 ATP8B2P98198 1209 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 MVPQ14764 893 aaKnown RBP21.55■■□□□ 1.04
MDC1-206ENST00000489540 VPS37DQ86XT2 251 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 CNTROBQ8N137 903 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 LPIN2Q92539 896 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 CHMP4BQ9H444 224 aaKnown RBP21.55■■□□□ 1.04
MDC1-206ENST00000489540 PNMA6EA0A0J9YXQ4 647 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 SHTN1A0MZ66 631 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 SASH1O94885 1247 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 GYG1P46976 350 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 HIRAP54198 1017 aaPredicted RBP21.55■■□□□ 1.04
MDC1-206ENST00000489540 ZNF280AP59817 542 aaPredicted RBP21.55■■□□□ 1.04
MDC1-206ENST00000489540 PDE3AQ14432 1141 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 FBXO33Q7Z6M2 555 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 TRPM4Q8TD43 1214 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 PGAP2Q9UHJ9 254 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 DDX19BQ9UMR2 479 aa21.55■■□□□ 1.04
MDC1-206ENST00000489540 SLC5A1P13866 664 aa21.54■■□□□ 1.04
MDC1-206ENST00000489540 MAP1SQ66K74 1059 aaPredicted RBP21.54■■□□□ 1.04
MDC1-206ENST00000489540 SAMD7Q7Z3H4 446 aa21.54■■□□□ 1.04
MDC1-206ENST00000489540 OGFOD1Q8N543 542 aa21.54■■□□□ 1.04
MDC1-206ENST00000489540 TDRD7Q8NHU6 1098 aaKnown RBP21.54■■□□□ 1.04
MDC1-206ENST00000489540 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
MDC1-206ENST00000489540 TBC1D10BQ4KMP7 808 aaPredicted RBP21.53■■□□□ 1.04
MDC1-206ENST00000489540 RBM26Q5T8P6 1007 aaKnown RBP21.53■■□□□ 1.04
MDC1-206ENST00000489540 C1orf115Q9H7X2 142 aa21.53■■□□□ 1.04
MDC1-206ENST00000489540 COG6Q9Y2V7 657 aa21.53■■□□□ 1.04
MDC1-206ENST00000489540 FKBP1AP62942 108 aaKnown RBP21.52■■□□□ 1.04
MDC1-206ENST00000489540 G3BP1Q13283 466 aaKnown RBP eCLIP21.52■■□□□ 1.04
MDC1-206ENST00000489540 POLA2Q14181 598 aa21.52■■□□□ 1.04
MDC1-206ENST00000489540 SSH3Q8TE77 659 aa21.52■■□□□ 1.04
MDC1-206ENST00000489540 MXD3Q9BW11 206 aa21.52■■□□□ 1.04
MDC1-206ENST00000489540 ATP2B3Q16720 1220 aa21.51■■□□□ 1.03
MDC1-206ENST00000489540 KIF4BQ2VIQ3 1234 aa21.51■■□□□ 1.03
MDC1-206ENST00000489540 FAM205AQ6ZU69 1335 aa21.51■■□□□ 1.03
MDC1-206ENST00000489540 BCAMP50895 628 aa21.5■■□□□ 1.03
MDC1-206ENST00000489540 MYOZ2Q9NPC6 264 aa21.5■■□□□ 1.03
MDC1-206ENST00000489540 HDAC9Q9UKV0 1011 aa21.5■■□□□ 1.03
MDC1-206ENST00000489540 AKAP2Q9Y2D5 859 aa21.5■■□□□ 1.03
MDC1-206ENST00000489540 SCN9AQ15858 1988 aa21.5■■□□□ 1.03
MDC1-206ENST00000489540 PASKQ96RG2 1323 aa21.5■■□□□ 1.03
MDC1-206ENST00000489540 FRAT2O75474 233 aaPredicted RBP21.49■■□□□ 1.03
MDC1-206ENST00000489540 EGFRP00533 1210 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms