RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SH2B1Q9NRF2 756 aaPredicted RBP6.99□□□□□ -1.29
RFC4-213ENST00000489028 AMOTL2Q9Y2J4 779 aa6.99□□□□□ -1.29
RFC4-213ENST00000489028 TXNDC11Q6PKC3 985 aa6.98□□□□□ -1.29
RFC4-213ENST00000489028 TMC7Q7Z402 723 aa6.98□□□□□ -1.29
RFC4-213ENST00000489028 FBXO11Q86XK2 927 aa6.98□□□□□ -1.29
RFC4-213ENST00000489028 PMEPA1Q969W9 287 aa6.98□□□□□ -1.29
RFC4-213ENST00000489028 CITED4Q96RK1 184 aa6.98□□□□□ -1.29
RFC4-213ENST00000489028 OSMRQ99650 979 aa6.98□□□□□ -1.29
RFC4-213ENST00000489028 NIF3L1Q9GZT8 377 aa6.98□□□□□ -1.29
RFC4-213ENST00000489028 PDE2AO00408 941 aaPredicted RBP6.97□□□□□ -1.29
RFC4-213ENST00000489028 MSTNO14793 375 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 TM4SF5O14894 197 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 EPHA1P21709 976 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 CDC27P30260 824 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 PDE3BQ13370 1112 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 SETDB1Q15047 1291 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 DTWD1Q8N5C7 304 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 DCTN4Q9UJW0 460 aa6.97□□□□□ -1.29
RFC4-213ENST00000489028 LINC01387J3KSC0 135 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 DLL1O00548 723 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 APBA3O96018 575 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 IGHA1P01876 353 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
RFC4-213ENST00000489028 EDN3P14138 238 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 CDC25BP30305 580 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 GALNT12Q8IXK2 581 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 TMEM102Q8N9M5 508 aaPredicted RBP6.96□□□□□ -1.3
RFC4-213ENST00000489028 GALNT11Q8NCW6 608 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 TMC1Q8TDI8 760 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 NXPE3Q969Y0 559 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 ADAM19Q9H013 955 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 PPME1Q9Y570 386 aa6.96□□□□□ -1.3
RFC4-213ENST00000489028 A0A1W2PP55 124 aa6.95□□□□□ -1.3
RFC4-213ENST00000489028 PTPRAP18433 802 aa6.95□□□□□ -1.3
RFC4-213ENST00000489028 MAPK1P28482 360 aa6.95□□□□□ -1.3
RFC4-213ENST00000489028 AEBP1Q8IUX7 1158 aa6.95□□□□□ -1.3
RFC4-213ENST00000489028 ALKBH8Q96BT7 664 aaKnown RBP6.95□□□□□ -1.3
RFC4-213ENST00000489028 LENG1Q96BZ8 264 aaPredicted RBP6.95□□□□□ -1.3
RFC4-213ENST00000489028 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
RFC4-213ENST00000489028 METTL12A8MUP2 240 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 EIF1AYO14602 144 aaKnown RBP6.94□□□□□ -1.3
RFC4-213ENST00000489028 ADGRE1Q14246 886 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 DSC3Q14574 896 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 HGSNATQ68CP4 663 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 CACTIN-AS1Q8N1I8 211 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 DMRTB1Q96MA1 342 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 CARD10Q9BWT7 1032 aa6.94□□□□□ -1.3
RFC4-213ENST00000489028 CPNE3O75131 537 aaKnown RBP6.93□□□□□ -1.3
RFC4-213ENST00000489028 NACC1Q96RE7 527 aa6.93□□□□□ -1.3
RFC4-213ENST00000489028 TCF12Q99081 682 aa6.93□□□□□ -1.3
RFC4-213ENST00000489028 BHLHE41Q9C0J9 482 aaPredicted RBP6.93□□□□□ -1.3
RFC4-213ENST00000489028 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
RFC4-213ENST00000489028 KCNK4Q9NYG8 393 aa6.93□□□□□ -1.3
RFC4-213ENST00000489028 C9orf172C9J069 976 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 FSCN2O14926 492 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 TREHO43280 583 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 GATA4P43694 442 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 FOXD4L6Q3SYB3 417 aaPredicted RBP6.92□□□□□ -1.3
RFC4-213ENST00000489028 FOXD4L3Q6VB84 417 aaPredicted RBP6.92□□□□□ -1.3
RFC4-213ENST00000489028 VN1R5Q7Z5H4 357 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 CCDC74AQ96AQ1 378 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 CSRNP1Q96S65 589 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 MUC3BQ9H195 1237 aa6.92□□□□□ -1.3
RFC4-213ENST00000489028 H3BRJ5 948 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 WISP1O95388 367 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 NEFLP07196 543 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 GRIA4P48058 902 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 IGF2-ASQ6U949 168 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 CCNJLQ8IV13 435 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 MAP4K3Q8IVH8 894 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 SRA1Q9HD15 236 aaKnown RBP6.91□□□□□ -1.3
RFC4-213ENST00000489028 USP21Q9UK80 565 aa6.91□□□□□ -1.3
RFC4-213ENST00000489028 PATL2C9JE40 543 aaKnown RBP6.9□□□□□ -1.3
RFC4-213ENST00000489028 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
RFC4-213ENST00000489028 ADAM11O75078 769 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 NOS3P29474 1203 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 DOC2BQ14184 412 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 KIAA0319Q5VV43 1072 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 PI16Q6UXB8 463 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 TXNRD3Q86VQ6 643 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
RFC4-213ENST00000489028 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
RFC4-213ENST00000489028 BSNDQ8WZ55 320 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 KLHDC7BQ96G42 594 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 LIN7BQ9HAP6 207 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
RFC4-213ENST00000489028 SOX1O00570 391 aaPredicted RBP6.89□□□□□ -1.31
RFC4-213ENST00000489028 ALX3O95076 343 aa6.89□□□□□ -1.31
RFC4-213ENST00000489028 NRG1Q02297 640 aaPredicted RBP6.89□□□□□ -1.31
RFC4-213ENST00000489028 WFDC12Q8WWY7 111 aa6.89□□□□□ -1.31
RFC4-213ENST00000489028 ASB16Q96NS5 453 aa6.89□□□□□ -1.31
RFC4-213ENST00000489028 SETDB2Q96T68 719 aa6.89□□□□□ -1.31
RFC4-213ENST00000489028 PNMA6FA0A0J9YX94 578 aa6.88□□□□□ -1.31
RFC4-213ENST00000489028 F8W735 103 aaPredicted RBP6.88□□□□□ -1.31
RFC4-213ENST00000489028 FURINP09958 794 aa6.88□□□□□ -1.31
RFC4-213ENST00000489028 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms