RNA–Protein interactions for RNA: ENST00000488998.1

CCDC146-209, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-209ENST00000488998 SHROOM4Q9ULL8 1493 aa5.76□□□□□ -1.49
CCDC146-209ENST00000488998 CDC27P30260 824 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 GATA4P43694 442 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 DOC2BQ14184 412 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 NACC1Q96RE7 527 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 OSMRQ99650 979 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 ZFYVE28Q9HCC9 887 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 LATS2Q9NRM7 1088 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 DZANK1Q9NVP4 752 aa5.75□□□□□ -1.49
CCDC146-209ENST00000488998 C9orf172C9J069 976 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 NFKBIEO00221 500 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 PDE2AO00408 941 aaPredicted RBP5.74□□□□□ -1.49
CCDC146-209ENST00000488998 FURINP09958 794 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 SETDB1Q15047 1291 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 USPL1Q5W0Q7 1092 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 DTWD1Q8N5C7 304 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 LENG1Q96BZ8 264 aaPredicted RBP5.74□□□□□ -1.49
CCDC146-209ENST00000488998 ZKSCAN3Q9BRR0 538 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 CARD10Q9BWT7 1032 aa5.74□□□□□ -1.49
CCDC146-209ENST00000488998 GNEQ9Y223 722 aaKnown RBP5.74□□□□□ -1.49
CCDC146-209ENST00000488998 DLL1O00548 723 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 EDN3P14138 238 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 PTPRAP18433 802 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 EPHA1P21709 976 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 ORC1Q13415 861 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 MBTPS1Q14703 1052 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 GALNT11Q8NCW6 608 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 AMOTL2Q9Y2J4 779 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 IVNS1ABPQ9Y6Y0 642 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 MYO15BQ96JP2 1530 aa5.73□□□□□ -1.49
CCDC146-209ENST00000488998 FAM177BA6PVY3 158 aa5.72□□□□□ -1.49
CCDC146-209ENST00000488998 PDE3BQ13370 1112 aa5.72□□□□□ -1.49
CCDC146-209ENST00000488998 PEAR1Q5VY43 1037 aaPredicted RBP5.72□□□□□ -1.49
CCDC146-209ENST00000488998 IGF2-ASQ6U949 168 aa5.72□□□□□ -1.49
CCDC146-209ENST00000488998 NXPE3Q969Y0 559 aa5.72□□□□□ -1.49
CCDC146-209ENST00000488998 NIF3L1Q9GZT8 377 aa5.72□□□□□ -1.49
CCDC146-209ENST00000488998 MUC3BQ9H195 1237 aa5.72□□□□□ -1.49
CCDC146-209ENST00000488998 ALX3O95076 343 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 IREB2P48200 963 aaKnown RBP5.71□□□□□ -1.5
CCDC146-209ENST00000488998 NRG1Q02297 640 aaPredicted RBP5.71□□□□□ -1.5
CCDC146-209ENST00000488998 ADGRE1Q14246 886 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 CACTIN-AS1Q8N1I8 211 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 ASAP3Q8TDY4 903 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 FAM129BQ96TA1 746 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 TRAIPQ9BWF2 469 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 ADAM19Q9H013 955 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 TPSG1Q9NRR2 321 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 KCNK4Q9NYG8 393 aa5.71□□□□□ -1.5
CCDC146-209ENST00000488998 METTL12A8MUP2 240 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 FSCN2O14926 492 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 GPR182O15218 404 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 DDX3YO15523 660 aaKnown RBP5.7□□□□□ -1.5
CCDC146-209ENST00000488998 HGSNATQ68CP4 663 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 FAM117BQ6P1L5 589 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 TXNRD3Q86VQ6 643 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 TMEM102Q8N9M5 508 aaPredicted RBP5.7□□□□□ -1.5
CCDC146-209ENST00000488998 WFDC12Q8WWY7 111 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 SLC7A3Q8WY07 619 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 CITED4Q96RK1 184 aa5.7□□□□□ -1.5
CCDC146-209ENST00000488998 A0A1W2PP55 124 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 IGHA2P01877 340 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 MAPK1P28482 360 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 NOS3P29474 1203 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 CD68P34810 354 aaPredicted RBP5.69□□□□□ -1.5
CCDC146-209ENST00000488998 CABP4P57796 275 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 KCNA1Q09470 495 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 SUZ12Q15022 739 aaKnown RBP5.69□□□□□ -1.5
CCDC146-209ENST00000488998 TMC7Q7Z402 723 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 AEBP1Q8IUX7 1158 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 MAP4K3Q8IVH8 894 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 GALNT12Q8IXK2 581 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 AGGF1Q8N302 714 aaeCLIP5.69□□□□□ -1.5
CCDC146-209ENST00000488998 BSNDQ8WZ55 320 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 KLHDC7BQ96G42 594 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 RBCK1Q9BYM8 510 aa5.69□□□□□ -1.5
CCDC146-209ENST00000488998 EIF1AYO14602 144 aaKnown RBP5.68□□□□□ -1.5
CCDC146-209ENST00000488998 CPNE3O75131 537 aaKnown RBP5.68□□□□□ -1.5
CCDC146-209ENST00000488998 WISP1O95388 367 aa5.68□□□□□ -1.5
CCDC146-209ENST00000488998 NEFLP07196 543 aa5.68□□□□□ -1.5
CCDC146-209ENST00000488998 FOXD4L6Q3SYB3 417 aaPredicted RBP5.68□□□□□ -1.5
CCDC146-209ENST00000488998 FOXD4L3Q6VB84 417 aaPredicted RBP5.68□□□□□ -1.5
CCDC146-209ENST00000488998 VN1R5Q7Z5H4 357 aa5.68□□□□□ -1.5
CCDC146-209ENST00000488998 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
CCDC146-209ENST00000488998 SEMA6BQ9H3T3 888 aa5.68□□□□□ -1.5
CCDC146-209ENST00000488998 AKTIPQ9H8T0 292 aa5.68□□□□□ -1.5
CCDC146-209ENST00000488998 SRA1Q9HD15 236 aaKnown RBP5.68□□□□□ -1.5
CCDC146-209ENST00000488998 DCTN4Q9UJW0 460 aa5.68□□□□□ -1.5
CCDC146-209ENST00000488998 SOX13Q9UN79 622 aa5.68□□□□□ -1.5
CCDC146-209ENST00000488998 F8W735 103 aaPredicted RBP5.67□□□□□ -1.5
CCDC146-209ENST00000488998 H3BRJ5 948 aa5.67□□□□□ -1.5
CCDC146-209ENST00000488998 K7ELQ4 463 aaPredicted RBP5.67□□□□□ -1.5
CCDC146-209ENST00000488998 SOX1O00570 391 aaPredicted RBP5.67□□□□□ -1.5
CCDC146-209ENST00000488998 TM4SF5O14894 197 aa5.67□□□□□ -1.5
CCDC146-209ENST00000488998 ADAM23O75077 832 aa5.67□□□□□ -1.5
CCDC146-209ENST00000488998 PDIA4P13667 645 aaKnown RBP5.67□□□□□ -1.5
CCDC146-209ENST00000488998 NLRP12P59046 1061 aa5.67□□□□□ -1.5
CCDC146-209ENST00000488998 SPRED3Q2MJR0 410 aa5.67□□□□□ -1.5
CCDC146-209ENST00000488998 TP53INP1Q96A56 240 aa5.67□□□□□ -1.5
CCDC146-209ENST00000488998 CCDC74AQ96AQ1 378 aa5.67□□□□□ -1.5
CCDC146-209ENST00000488998 DMRTB1Q96MA1 342 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms