RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
YIPF3-207ENST00000488966 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
YIPF3-207ENST00000488966 ZNF296Q8WUU4 475 aaPredicted RBP13.89□□□□□ -0.19
YIPF3-207ENST00000488966 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
YIPF3-207ENST00000488966 HPS5Q9UPZ3 1129 aa13.89□□□□□ -0.19
YIPF3-207ENST00000488966 PI4KAP2A4QPH2 592 aa13.88□□□□□ -0.19
YIPF3-207ENST00000488966 WNT10BO00744 389 aa13.88□□□□□ -0.19
YIPF3-207ENST00000488966 CCT4P50991 539 aaKnown RBP13.88□□□□□ -0.19
YIPF3-207ENST00000488966 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
YIPF3-207ENST00000488966 TTLL12Q14166 644 aaPredicted RBP13.88□□□□□ -0.19
YIPF3-207ENST00000488966 KSR2Q6VAB6 950 aa13.88□□□□□ -0.19
YIPF3-207ENST00000488966 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
YIPF3-207ENST00000488966 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
YIPF3-207ENST00000488966 PI4KAP1Q8N8J0 262 aa13.88□□□□□ -0.19
YIPF3-207ENST00000488966 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
YIPF3-207ENST00000488966 SASH1O94885 1247 aa13.87□□□□□ -0.19
YIPF3-207ENST00000488966 TM4SF4P48230 202 aa13.87□□□□□ -0.19
YIPF3-207ENST00000488966 CWF19L2Q2TBE0 894 aaKnown RBP13.87□□□□□ -0.19
YIPF3-207ENST00000488966 STRIP1Q5VSL9 837 aa13.87□□□□□ -0.19
YIPF3-207ENST00000488966 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
YIPF3-207ENST00000488966 HDAC9Q9UKV0 1011 aa13.87□□□□□ -0.19
YIPF3-207ENST00000488966 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
YIPF3-207ENST00000488966 KLRK1P26718 216 aa13.86□□□□□ -0.19
YIPF3-207ENST00000488966 PKN2Q16513 984 aaKnown RBP13.86□□□□□ -0.19
YIPF3-207ENST00000488966 COA1Q9GZY4 146 aa13.86□□□□□ -0.19
YIPF3-207ENST00000488966 MYO3BQ8WXR4 1341 aa13.86□□□□□ -0.19
YIPF3-207ENST00000488966 H7C1W4 665 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 GPR25O00155 361 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 NF2P35240 595 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
YIPF3-207ENST00000488966 NEXNQ0ZGT2 675 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 G2E3Q7L622 706 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 UBE3BQ7Z3V4 1068 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 KIAA0825Q8IV33 1275 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 TSR2Q969E8 191 aaKnown RBP13.85□□□□□ -0.19
YIPF3-207ENST00000488966 CHMP4AQ9BY43 222 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 PCDH10Q9P2E7 1040 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
YIPF3-207ENST00000488966 AKAP11Q9UKA4 1901 aa13.84□□□□□ -0.19
YIPF3-207ENST00000488966 IGHMBP2P38935 993 aaKnown RBP13.84□□□□□ -0.19
YIPF3-207ENST00000488966 PRKG1Q13976 671 aa13.84□□□□□ -0.19
YIPF3-207ENST00000488966 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
YIPF3-207ENST00000488966 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
YIPF3-207ENST00000488966 R3HDMLQ9H3Y0 253 aa13.84□□□□□ -0.19
YIPF3-207ENST00000488966 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
YIPF3-207ENST00000488966 PSME4Q14997 1843 aa13.83□□□□□ -0.2
YIPF3-207ENST00000488966 ITGA6P23229 1130 aa13.83□□□□□ -0.2
YIPF3-207ENST00000488966 PRPF38BQ5VTL8 546 aaKnown RBP13.83□□□□□ -0.2
YIPF3-207ENST00000488966 ARMC9Q7Z3E5 817 aa13.83□□□□□ -0.2
YIPF3-207ENST00000488966 APOBEC3FQ8IUX4 373 aaKnown RBP13.83□□□□□ -0.2
YIPF3-207ENST00000488966 ZBED3Q96IU2 234 aaPredicted RBP13.83□□□□□ -0.2
YIPF3-207ENST00000488966 STK31Q9BXU1 1019 aa13.83□□□□□ -0.2
YIPF3-207ENST00000488966 GTF2IP78347 998 aa13.82□□□□□ -0.2
YIPF3-207ENST00000488966 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
YIPF3-207ENST00000488966 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
YIPF3-207ENST00000488966 SPRYD7Q5W111 196 aa13.82□□□□□ -0.2
YIPF3-207ENST00000488966 FBXO46Q6PJ61 603 aaPredicted RBP13.82□□□□□ -0.2
YIPF3-207ENST00000488966 PLA2G12BQ9BX93 195 aa13.82□□□□□ -0.2
YIPF3-207ENST00000488966 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
YIPF3-207ENST00000488966 FZD1Q9UP38 647 aa13.82□□□□□ -0.2
YIPF3-207ENST00000488966 TNRC18O15417 2968 aaPredicted RBP13.82□□□□□ -0.2
YIPF3-207ENST00000488966 SNAP23O00161 211 aa13.81□□□□□ -0.2
YIPF3-207ENST00000488966 FKTNO75072 461 aa13.81□□□□□ -0.2
YIPF3-207ENST00000488966 MMP14P50281 582 aa13.81□□□□□ -0.2
YIPF3-207ENST00000488966 CASP7P55210 303 aa13.81□□□□□ -0.2
YIPF3-207ENST00000488966 GCKRQ14397 625 aa13.81□□□□□ -0.2
YIPF3-207ENST00000488966 MPHOSPH8Q99549 860 aa13.81□□□□□ -0.2
YIPF3-207ENST00000488966 CFHR5Q9BXR6 569 aa13.81□□□□□ -0.2
YIPF3-207ENST00000488966 ANGEL1Q9UNK9 670 aaKnown RBP13.81□□□□□ -0.2
YIPF3-207ENST00000488966 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 CSF1RP07333 972 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 KCNJ4P48050 445 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 CHRNDQ07001 517 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
YIPF3-207ENST00000488966 CERS5Q8N5B7 392 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 CD209Q9NNX6 404 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 PCDHAC2Q9Y5I4 1007 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 PDE4DIPQ5VU43 2346 aa13.8□□□□□ -0.2
YIPF3-207ENST00000488966 ZNF646O15015 1829 aaPredicted RBP13.79□□□□□ -0.2
YIPF3-207ENST00000488966 DLGAP5Q15398 846 aa13.79□□□□□ -0.2
YIPF3-207ENST00000488966 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
YIPF3-207ENST00000488966 IRS2Q9Y4H2 1338 aa13.79□□□□□ -0.2
YIPF3-207ENST00000488966 TAF5LO75529 589 aa13.78□□□□□ -0.2
YIPF3-207ENST00000488966 FLIIQ13045 1269 aa13.78□□□□□ -0.2
YIPF3-207ENST00000488966 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
YIPF3-207ENST00000488966 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
YIPF3-207ENST00000488966 SLC10A4Q96EP9 437 aa13.78□□□□□ -0.2
YIPF3-207ENST00000488966 CLMNQ96JQ2 1002 aa13.78□□□□□ -0.2
YIPF3-207ENST00000488966 CLRN2A0PK11 232 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 ANKRD18BA2A2Z9 1011 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 MANSC4A6NHS7 340 aaPredicted RBP13.77□□□□□ -0.21
YIPF3-207ENST00000488966 F8W031 263 aaPredicted RBP13.77□□□□□ -0.21
YIPF3-207ENST00000488966 ALDH1A1P00352 501 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 AOX1Q06278 1338 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 MAP3K11Q16584 847 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 CCDC184Q52MB2 194 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 MTMR14Q8NCE2 650 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms