RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 IL15P40933 162 aaPredicted RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 NEK4P51957 841 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 CASP7P55210 303 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 COPS2P61201 443 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 PTPN12Q05209 780 aaKnown RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 TCIRG1Q13488 830 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 L1TD1Q5T7N2 865 aaKnown RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 NBPF14Q5TI25 921 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 RNF20Q5VTR2 975 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 TSHZ3Q63HK5 1081 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 NBPF10Q6P3W6 841 aaKnown RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 NBPF15Q8N660 670 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 SPRYD3Q8NCJ5 442 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 BBXQ8WY36 941 aaPredicted RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 ISCA1Q9BUE6 129 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 TM6SF1Q9BZW5 370 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 SNRKQ9NRH2 765 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 PA2G4Q9UQ80 394 aaKnown RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 BCL9O00512 1426 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 TOM1O60784 492 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 PCCAP05165 728 aaPredicted RBP7.97□□□□□ -1.13
HDLBP-243ENST00000488923 RFX5P48382 616 aaPredicted RBP7.97□□□□□ -1.13
HDLBP-243ENST00000488923 CUL4AQ13619 759 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 TNNI3KQ59H18 835 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 ZNF598Q86UK7 904 aaKnown RBP7.97□□□□□ -1.13
HDLBP-243ENST00000488923 UNC5CLQ8IV45 518 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 EAF2Q96CJ1 260 aaPredicted RBP7.97□□□□□ -1.13
HDLBP-243ENST00000488923 PLA2G12BQ9BX93 195 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 HMG20BQ9P0W2 317 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 AKAP2Q9Y2D5 859 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 FPGT-TNNI3KV9GXZ4 949 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 ROBO1Q9Y6N7 1651 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 ARFGEF2Q9Y6D5 1785 aa7.97□□□□□ -1.13
HDLBP-243ENST00000488923 TUBGCP6Q96RT7 1819 aa7.96□□□□□ -1.13
HDLBP-243ENST00000488923 ERVV-1B6SEH8 477 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 ATP5J2-PTCD1G3V325 749 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 ZPR1O75312 459 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 CD2BP2O95400 341 aaKnown RBP7.96□□□□□ -1.14
HDLBP-243ENST00000488923 A1BGP04217 495 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 PSMA5P28066 241 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 FOXO4P98177 505 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 CCDC57Q2TAC2 916 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 EPHA10Q5JZY3 1008 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 LMBR1LQ6UX01 489 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.96□□□□□ -1.14
HDLBP-243ENST00000488923 PIGBQ92521 554 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 KCNB2Q92953 911 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 TNPO1Q92973 898 aaKnown RBP7.96□□□□□ -1.14
HDLBP-243ENST00000488923 ZSCAN31Q96LW9 406 aaPredicted RBP7.96□□□□□ -1.14
HDLBP-243ENST00000488923 AK7Q96M32 723 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 FSD1Q9BTV5 496 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 LSG1Q9H089 658 aaKnown RBP7.96□□□□□ -1.14
HDLBP-243ENST00000488923 MAP3K15Q6ZN16 1313 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 CDHR2Q9BYE9 1310 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 LTBP4Q8N2S1 1624 aa7.96□□□□□ -1.14
HDLBP-243ENST00000488923 SHANK3Q9BYB0 1731 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 POTECB2RU33 542 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 EYA2O00167 538 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 TRAK2O60296 914 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 IL6STP40189 918 aaPredicted RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 KCNJ4P48050 445 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 KRT32Q14532 448 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 ANKRD1Q15327 319 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 SPRYD7Q5W111 196 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 CWC27Q6UX04 472 aaKnown RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 GIGYF2Q6Y7W6 1299 aaKnown RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 BARGINQ6ZT62 677 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 TTLL7Q6ZT98 887 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 ZBTB38Q8NAP3 1195 aaPredicted RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 SMARCC1Q92922 1105 aaPredicted RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 CHMP4CQ96CF2 233 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 TMX3Q96JJ7 454 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 PRR14Q9BWN1 585 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 CCDC8Q9H0W5 538 aaPredicted RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 SIL1Q9H173 461 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 ZBTB3Q9H5J0 574 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 SH2B1Q9NRF2 756 aaPredicted RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.95□□□□□ -1.14
HDLBP-243ENST00000488923 SPATA31A1Q5TZJ5 1347 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 CCDC171Q6TFL3 1326 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 ABCC12Q96J65 1359 aa7.95□□□□□ -1.14
HDLBP-243ENST00000488923 SPDYE16A6NNV3 312 aaPredicted RBP7.94□□□□□ -1.14
HDLBP-243ENST00000488923 CYP2E1P05181 493 aaPredicted RBP7.94□□□□□ -1.14
HDLBP-243ENST00000488923 CYP19A1P11511 503 aaPredicted RBP7.94□□□□□ -1.14
HDLBP-243ENST00000488923 TFCP2Q12800 502 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 DDB1Q16531 1140 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
HDLBP-243ENST00000488923 VPS53Q5VIR6 699 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 DNAJC10Q8IXB1 793 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 MAP4K1Q92918 833 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 HAUS7Q99871 368 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 CEP126Q9P2H0 1117 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 RBM27Q9P2N5 1060 aaKnown RBP7.94□□□□□ -1.14
HDLBP-243ENST00000488923 STK17AQ9UEE5 414 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 ASAP1Q9ULH1 1129 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 LIMCH1Q9UPQ0 1083 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 CHMP3Q9Y3E7 222 aa7.94□□□□□ -1.14
HDLBP-243ENST00000488923 SNX14Q9Y5W7 946 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms