RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 KDM2BQ8NHM5 1336 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 POTECB2RU33 542 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 ECE2O60344 883 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 KLRK1P26718 216 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 EIF6P56537 245 aaKnown RBP11.02□□□□□ -0.65
SMKR1-202ENST00000488846 CXCL9Q07325 125 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 METTL24Q5JXM2 366 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 DBNDD1Q9H9R9 158 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 SCN9AQ15858 1988 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 ZNF646O15015 1829 aaPredicted RBP11.02□□□□□ -0.65
SMKR1-202ENST00000488846 PSME4Q14997 1843 aa11.02□□□□□ -0.65
SMKR1-202ENST00000488846 DDNO94850 711 aaPredicted RBP11.01□□□□□ -0.65
SMKR1-202ENST00000488846 VIL1P09327 827 aaKnown RBP11.01□□□□□ -0.65
SMKR1-202ENST00000488846 IL1R1P14778 569 aa11.01□□□□□ -0.65
SMKR1-202ENST00000488846 KCNJ4P48050 445 aa11.01□□□□□ -0.65
SMKR1-202ENST00000488846 AAMPQ13685 434 aa11.01□□□□□ -0.65
SMKR1-202ENST00000488846 PUM3Q15397 648 aaKnown RBP11.01□□□□□ -0.65
SMKR1-202ENST00000488846 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
SMKR1-202ENST00000488846 FBXO33Q7Z6M2 555 aa11.01□□□□□ -0.65
SMKR1-202ENST00000488846 FAM84BQ96KN1 310 aaPredicted RBP11.01□□□□□ -0.65
SMKR1-202ENST00000488846 SIL1Q9H173 461 aa11.01□□□□□ -0.65
SMKR1-202ENST00000488846 CEP126Q9P2H0 1117 aa11.01□□□□□ -0.65
SMKR1-202ENST00000488846 KIF3CO14782 793 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 SASH1O94885 1247 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 TNIP1Q15025 636 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 LPIN2Q92539 896 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
SMKR1-202ENST00000488846 CD209Q9NNX6 404 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 KCNQ5Q9NR82 932 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 SUPT16HQ9Y5B9 1047 aaKnown RBP11□□□□□ -0.65
SMKR1-202ENST00000488846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11□□□□□ -0.65
SMKR1-202ENST00000488846 SCN4AP35499 1836 aa11□□□□□ -0.65
SMKR1-202ENST00000488846 PSMD14O00487 310 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 SCNN1DP51172 638 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 ZNF804AQ7Z570 1209 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 TDRD7Q8NHU6 1098 aaKnown RBP10.99□□□□□ -0.65
SMKR1-202ENST00000488846 DPF2Q92785 391 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 CRBNQ96SW2 442 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 GMLQ99445 158 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 NMRK2Q9NPI5 230 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 GPR108Q9NPR9 543 aa10.99□□□□□ -0.65
SMKR1-202ENST00000488846 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 HMMRO75330 724 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 SURF6O75683 361 aaKnown RBP10.98□□□□□ -0.65
SMKR1-202ENST00000488846 RAD17O75943 681 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 IFIT1P09914 478 aaKnown RBP10.98□□□□□ -0.65
SMKR1-202ENST00000488846 VEGFAP15692 232 aaPredicted RBP10.98□□□□□ -0.65
SMKR1-202ENST00000488846 RPS12P25398 132 aaKnown RBP10.98□□□□□ -0.65
SMKR1-202ENST00000488846 HIBADHP31937 336 aaKnown RBP10.98□□□□□ -0.65
SMKR1-202ENST00000488846 TFCP2Q12800 502 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 G3BP1Q13283 466 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMKR1-202ENST00000488846 ATP2B3Q16720 1220 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 DACT2Q5SW24 774 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 STRIP1Q5VSL9 837 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 AKAP2Q9Y2D5 859 aa10.98□□□□□ -0.65
SMKR1-202ENST00000488846 IQCA1LA6NCM1 817 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 SLC5A1P13866 664 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 GYG1P46976 350 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 FKBP1AP62942 108 aaKnown RBP10.97□□□□□ -0.65
SMKR1-202ENST00000488846 HSP90AB4PQ58FF6 505 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 RSBN1LQ6PCB5 846 aaPredicted RBP10.97□□□□□ -0.65
SMKR1-202ENST00000488846 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 AGBL3Q8NEM8 1001 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 ZNF526Q8TF50 670 aaPredicted RBP10.97□□□□□ -0.65
SMKR1-202ENST00000488846 GPRC5DQ9NZD1 345 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 PCDHB15Q9Y5E8 787 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 FAM205AQ6ZU69 1335 aa10.97□□□□□ -0.65
SMKR1-202ENST00000488846 ADAMTSL1Q8N6G6 1762 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 MYO3BQ8WXR4 1341 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 A0A1B0GUL7 405 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 G3V3G9 751 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 GMPSP49915 693 aaPredicted RBP10.96□□□□□ -0.65
SMKR1-202ENST00000488846 MMP14P50281 582 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 BCAMP50895 628 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 TIMM10P62072 90 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 CAVIN4Q5BKX8 364 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 TAF1DQ9H5J8 278 aaPredicted RBP10.96□□□□□ -0.65
SMKR1-202ENST00000488846 HACL1Q9UJ83 578 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
SMKR1-202ENST00000488846 RAB11FIP3O75154 756 aa10.95□□□□□ -0.66
SMKR1-202ENST00000488846 EPS15P42566 896 aa10.95□□□□□ -0.66
SMKR1-202ENST00000488846 ZNF280AP59817 542 aaPredicted RBP10.95□□□□□ -0.66
SMKR1-202ENST00000488846 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
SMKR1-202ENST00000488846 DCTPP1Q9H773 170 aa10.95□□□□□ -0.66
SMKR1-202ENST00000488846 EXOC6BQ9Y2D4 811 aa10.95□□□□□ -0.66
SMKR1-202ENST00000488846 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
SMKR1-202ENST00000488846 PDS5AQ29RF7 1337 aaKnown RBP10.94□□□□□ -0.66
SMKR1-202ENST00000488846 SEMA3EO15041 775 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 TOMM70O94826 608 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 ADORA1P30542 326 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 EPHX2P34913 555 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 GTF2IP78347 998 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 TNNI3KQ59H18 835 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms