RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 KCNJ4P48050 445 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 TXNRD3Q86VQ6 643 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 DCTPP1Q9H773 170 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 RIMBP2O15034 1052 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 FGFR2P21802 821 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 KIAA2012Q0VF49 1180 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 UBE4AQ14139 1066 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 WASHC4Q2M389 1173 aa23.81■■□□□ 1.4
CCM2-216ENST00000488727 MED23Q9ULK4 1368 aa23.8■■□□□ 1.4
CCM2-216ENST00000488727 PPIP5K2O43314 1243 aa23.8■■□□□ 1.4
CCM2-216ENST00000488727 PUM3Q15397 648 aaKnown RBP23.8■■□□□ 1.4
CCM2-216ENST00000488727 HSP90AB4PQ58FF6 505 aa23.8■■□□□ 1.4
CCM2-216ENST00000488727 TIAM2Q8IVF5 1701 aa23.8■■□□□ 1.4
CCM2-216ENST00000488727 ARAP2Q8WZ64 1704 aa23.8■■□□□ 1.4
CCM2-216ENST00000488727 CHD4Q14839 1912 aa23.8■■□□□ 1.4
CCM2-216ENST00000488727 APBB1O00213 710 aa23.79■■□□□ 1.4
CCM2-216ENST00000488727 EYA3Q99504 573 aa23.79■■□□□ 1.4
CCM2-216ENST00000488727 VPS33BQ9H267 617 aa23.79■■□□□ 1.4
CCM2-216ENST00000488727 ZNF609O15014 1411 aa23.78■■□□□ 1.4
CCM2-216ENST00000488727 ATP2B3Q16720 1220 aa23.78■■□□□ 1.4
CCM2-216ENST00000488727 C9orf131Q5VYM1 1079 aa23.78■■□□□ 1.4
CCM2-216ENST00000488727 LARGE2Q8N3Y3 721 aa23.78■■□□□ 1.4
CCM2-216ENST00000488727 RHPN1Q8TCX5 695 aa23.78■■□□□ 1.4
CCM2-216ENST00000488727 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
CCM2-216ENST00000488727 RNF181Q9P0P0 153 aa23.78■■□□□ 1.4
CCM2-216ENST00000488727 C15orf52Q6ZUT6 534 aaKnown RBP23.77■■□□□ 1.4
CCM2-216ENST00000488727 ERC1Q8IUD2 1116 aa23.77■■□□□ 1.4
CCM2-216ENST00000488727 LPIN2Q92539 896 aa23.77■■□□□ 1.4
CCM2-216ENST00000488727 RAB11FIP3O75154 756 aa23.76■■□□□ 1.39
CCM2-216ENST00000488727 A0A1B0GUL7 405 aa23.76■■□□□ 1.39
CCM2-216ENST00000488727 TIMM10P62072 90 aa23.76■■□□□ 1.39
CCM2-216ENST00000488727 KIF1BPQ96EK5 621 aa23.76■■□□□ 1.39
CCM2-216ENST00000488727 IL1RAPL2Q9NP60 686 aa23.76■■□□□ 1.39
CCM2-216ENST00000488727 DOK7Q18PE1 504 aa23.75■■□□□ 1.39
CCM2-216ENST00000488727 TNNI3KQ59H18 835 aa23.75■■□□□ 1.39
CCM2-216ENST00000488727 DBNDD1Q9H9R9 158 aa23.75■■□□□ 1.39
CCM2-216ENST00000488727 GPR108Q9NPR9 543 aa23.75■■□□□ 1.39
CCM2-216ENST00000488727 AKAP2Q9Y2D5 859 aa23.75■■□□□ 1.39
CCM2-216ENST00000488727 FPGT-TNNI3KV9GXZ4 949 aa23.75■■□□□ 1.39
CCM2-216ENST00000488727 SCN9AQ15858 1988 aa23.74■■□□□ 1.39
CCM2-216ENST00000488727 IFIT1P09914 478 aaKnown RBP23.74■■□□□ 1.39
CCM2-216ENST00000488727 SLC5A1P13866 664 aa23.74■■□□□ 1.39
CCM2-216ENST00000488727 GYG1P46976 350 aa23.74■■□□□ 1.39
CCM2-216ENST00000488727 ADORA1P30542 326 aa23.73■■□□□ 1.39
CCM2-216ENST00000488727 SMC5Q8IY18 1101 aa23.73■■□□□ 1.39
CCM2-216ENST00000488727 FAM84BQ96KN1 310 aaPredicted RBP23.73■■□□□ 1.39
CCM2-216ENST00000488727 JDP2Q8WYK2 163 aa23.73■■□□□ 1.39
CCM2-216ENST00000488727 EAF2Q96CJ1 260 aaPredicted RBP23.73■■□□□ 1.39
CCM2-216ENST00000488727 LRRCC1Q9C099 1032 aa23.73■■□□□ 1.39
CCM2-216ENST00000488727 SMARCA5O60264 1052 aaPredicted RBP23.72■■□□□ 1.39
CCM2-216ENST00000488727 ECE2O60344 883 aa23.72■■□□□ 1.39
CCM2-216ENST00000488727 NIM1KQ8IY84 436 aa23.72■■□□□ 1.39
CCM2-216ENST00000488727 GCC1Q96CN9 775 aa23.72■■□□□ 1.39
CCM2-216ENST00000488727 YDJCA8MPS7 323 aa23.71■■□□□ 1.39
CCM2-216ENST00000488727 XAGE2Q96GT9 111 aa23.71■■□□□ 1.39
CCM2-216ENST00000488727 NEUROD6Q96NK8 337 aa23.71■■□□□ 1.39
CCM2-216ENST00000488727 BCAMP50895 628 aa23.7■■□□□ 1.39
CCM2-216ENST00000488727 FBXO33Q7Z6M2 555 aa23.7■■□□□ 1.39
CCM2-216ENST00000488727 COA1Q9GZY4 146 aa23.7■■□□□ 1.39
CCM2-216ENST00000488727 TLR7Q9NYK1 1049 aaKnown RBP23.7■■□□□ 1.39
CCM2-216ENST00000488727 ZNF646O15015 1829 aaPredicted RBP23.7■■□□□ 1.38
CCM2-216ENST00000488727 PSME4Q14997 1843 aa23.7■■□□□ 1.38
CCM2-216ENST00000488727 FZD9O00144 591 aa23.7■■□□□ 1.38
CCM2-216ENST00000488727 ZNF804AQ7Z570 1209 aa23.7■■□□□ 1.38
CCM2-216ENST00000488727 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
CCM2-216ENST00000488727 CD209Q9NNX6 404 aa23.7■■□□□ 1.38
CCM2-216ENST00000488727 KCNQ5Q9NR82 932 aa23.7■■□□□ 1.38
CCM2-216ENST00000488727 ZNRF3Q9ULT6 936 aa23.7■■□□□ 1.38
CCM2-216ENST00000488727 HIBADHP31937 336 aaKnown RBP23.69■■□□□ 1.38
CCM2-216ENST00000488727 CAVIN4Q5BKX8 364 aa23.69■■□□□ 1.38
CCM2-216ENST00000488727 AACSQ86V21 672 aa23.69■■□□□ 1.38
CCM2-216ENST00000488727 DBNDD2Q9BQY9 259 aa23.69■■□□□ 1.38
CCM2-216ENST00000488727 CCDC8Q9H0W5 538 aaPredicted RBP23.69■■□□□ 1.38
CCM2-216ENST00000488727 DBNLQ9UJU6 430 aaKnown RBP23.69■■□□□ 1.38
CCM2-216ENST00000488727 G3V3G9 751 aa23.68■■□□□ 1.38
CCM2-216ENST00000488727 DCAF8Q5TAQ9 597 aa23.68■■□□□ 1.38
CCM2-216ENST00000488727 CLASRPQ8N2M8 674 aaKnown RBP23.68■■□□□ 1.38
CCM2-216ENST00000488727 MYH13Q9UKX3 1938 aa23.68■■□□□ 1.38
CCM2-216ENST00000488727 ZNF541Q9H0D2 1346 aa23.68■■□□□ 1.38
CCM2-216ENST00000488727 PHKA1P46020 1223 aa23.67■■□□□ 1.38
CCM2-216ENST00000488727 PODNQ7Z5L7 613 aa23.67■■□□□ 1.38
CCM2-216ENST00000488727 IL1R1P14778 569 aa23.67■■□□□ 1.38
CCM2-216ENST00000488727 VPS37DQ86XT2 251 aa23.67■■□□□ 1.38
CCM2-216ENST00000488727 ANKRD45Q5TZF3 282 aa23.66■■□□□ 1.38
CCM2-216ENST00000488727 CCDC102BQ68D86 513 aa23.66■■□□□ 1.38
CCM2-216ENST00000488727 TDRD7Q8NHU6 1098 aaKnown RBP23.66■■□□□ 1.38
CCM2-216ENST00000488727 IQSEC3Q9UPP2 1182 aaPredicted RBP23.66■■□□□ 1.38
CCM2-216ENST00000488727 ZC3H4Q9UPT8 1303 aaKnown RBP23.66■■□□□ 1.38
CCM2-216ENST00000488727 CXCL9Q07325 125 aa23.65■■□□□ 1.38
CCM2-216ENST00000488727 RAD17O75943 681 aa23.64■■□□□ 1.38
CCM2-216ENST00000488727 COL1A1P02452 1464 aaPredicted RBP23.64■■□□□ 1.37
CCM2-216ENST00000488727 GORABQ5T7V8 394 aa23.63■■□□□ 1.37
CCM2-216ENST00000488727 IFIT2P09913 472 aaKnown RBP23.62■■□□□ 1.37
CCM2-216ENST00000488727 EIF6P56537 245 aaKnown RBP23.62■■□□□ 1.37
CCM2-216ENST00000488727 C16orf71Q8IYS4 520 aaPredicted RBP23.62■■□□□ 1.37
CCM2-216ENST00000488727 AKAP11Q9UKA4 1901 aa23.62■■□□□ 1.37
CCM2-216ENST00000488727 PSMD14O00487 310 aa23.62■■□□□ 1.37
CCM2-216ENST00000488727 NUCB1Q02818 461 aa23.62■■□□□ 1.37
CCM2-216ENST00000488727 CIAPIN1Q6FI81 312 aa23.62■■□□□ 1.37
CCM2-216ENST00000488727 JAG2Q9Y219 1238 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms