RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 CDC5LQ99459 802 aaKnown RBP15.82■□□□□ 0.12
TTC3-221ENST00000488522 BSDC1Q9NW68 430 aaPredicted RBP15.82■□□□□ 0.12
TTC3-221ENST00000488522 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 APAF1O14727 1248 aa15.81■□□□□ 0.12
TTC3-221ENST00000488522 TRPA1O75762 1119 aa15.81■□□□□ 0.12
TTC3-221ENST00000488522 IGKV5-2P06315 115 aa15.81■□□□□ 0.12
TTC3-221ENST00000488522 MMP14P50281 582 aa15.81■□□□□ 0.12
TTC3-221ENST00000488522 TTLL11Q8NHH1 800 aa15.81■□□□□ 0.12
TTC3-221ENST00000488522 MYO3BQ8WXR4 1341 aa15.8■□□□□ 0.12
TTC3-221ENST00000488522 DACT2Q5SW24 774 aa15.8■□□□□ 0.12
TTC3-221ENST00000488522 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
TTC3-221ENST00000488522 MINPP1Q9UNW1 487 aa15.8■□□□□ 0.12
TTC3-221ENST00000488522 MAP3K2Q9Y2U5 619 aa15.8■□□□□ 0.12
TTC3-221ENST00000488522 ELL2O00472 640 aaPredicted RBP15.79■□□□□ 0.12
TTC3-221ENST00000488522 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
TTC3-221ENST00000488522 NOM1Q5C9Z4 860 aaKnown RBP15.79■□□□□ 0.12
TTC3-221ENST00000488522 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
TTC3-221ENST00000488522 CTU1Q7Z7A3 348 aaKnown RBP15.79■□□□□ 0.12
TTC3-221ENST00000488522 LAMB1P07942 1786 aa15.79■□□□□ 0.12
TTC3-221ENST00000488522 CCDC85AQ96PX6 553 aaPredicted RBP15.78■□□□□ 0.12
TTC3-221ENST00000488522 COA1Q9GZY4 146 aa15.78■□□□□ 0.12
TTC3-221ENST00000488522 PI4KAP2A4QPH2 592 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 ANP32CO43423 234 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.12
TTC3-221ENST00000488522 TSPYL6Q8N831 410 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 PI4KAP1Q8N8J0 262 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 JARID2Q92833 1246 aaPredicted RBP15.77■□□□□ 0.12
TTC3-221ENST00000488522 PLA2G12BQ9BX93 195 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 CFHR5Q9BXR6 569 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 GREM2Q9H772 168 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 LEMD3Q9Y2U8 911 aa15.77■□□□□ 0.12
TTC3-221ENST00000488522 COL1A1P02452 1464 aaPredicted RBP15.77■□□□□ 0.11
TTC3-221ENST00000488522 WTIPA6NIX2 430 aaPredicted RBP15.76■□□□□ 0.11
TTC3-221ENST00000488522 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
TTC3-221ENST00000488522 H7C1W4 665 aa15.76■□□□□ 0.11
TTC3-221ENST00000488522 WNT10BO00744 389 aa15.76■□□□□ 0.11
TTC3-221ENST00000488522 TM4SF4P48230 202 aa15.76■□□□□ 0.11
TTC3-221ENST00000488522 CCDC27Q2M243 656 aa15.76■□□□□ 0.11
TTC3-221ENST00000488522 NBPF9Q3BBW0 867 aa15.76■□□□□ 0.11
TTC3-221ENST00000488522 CACNA1FO60840 1977 aa15.76■□□□□ 0.11
TTC3-221ENST00000488522 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
TTC3-221ENST00000488522 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
TTC3-221ENST00000488522 OGFOD1Q8N543 542 aa15.75■□□□□ 0.11
TTC3-221ENST00000488522 ZBED3Q96IU2 234 aaPredicted RBP15.75■□□□□ 0.11
TTC3-221ENST00000488522 A0A1B0GUL6 1792 aa15.75■□□□□ 0.11
TTC3-221ENST00000488522 ECM29Q5VYK3 1845 aa15.74■□□□□ 0.11
TTC3-221ENST00000488522 CASP7P55210 303 aa15.74■□□□□ 0.11
TTC3-221ENST00000488522 MOB2Q70IA6 237 aa15.74■□□□□ 0.11
TTC3-221ENST00000488522 IRS2Q9Y4H2 1338 aa15.73■□□□□ 0.11
TTC3-221ENST00000488522 UBE2Q2LH0YL09 131 aa15.73■□□□□ 0.11
TTC3-221ENST00000488522 CSF1RP07333 972 aa15.73■□□□□ 0.11
TTC3-221ENST00000488522 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
TTC3-221ENST00000488522 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
TTC3-221ENST00000488522 TXNRD3Q86VQ6 643 aa15.73■□□□□ 0.11
TTC3-221ENST00000488522 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
TTC3-221ENST00000488522 ANKRD2Q9GZV1 360 aa15.73■□□□□ 0.11
TTC3-221ENST00000488522 PCDH10Q9P2E7 1040 aa15.73■□□□□ 0.11
TTC3-221ENST00000488522 ZNF804BA4D1E1 1349 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 IL16Q14005 1332 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 NF2P35240 595 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
TTC3-221ENST00000488522 SOX10P56693 466 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 LDLRAD1Q5T700 205 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 C15orf52Q6ZUT6 534 aaKnown RBP15.72■□□□□ 0.11
TTC3-221ENST00000488522 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
TTC3-221ENST00000488522 ZNF296Q8WUU4 475 aaPredicted RBP15.72■□□□□ 0.11
TTC3-221ENST00000488522 MXD3Q9BW11 206 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 HPS5Q9UPZ3 1129 aa15.72■□□□□ 0.11
TTC3-221ENST00000488522 ITGA6P23229 1130 aa15.71■□□□□ 0.11
TTC3-221ENST00000488522 SREBF2Q12772 1141 aa15.71■□□□□ 0.11
TTC3-221ENST00000488522 GCKRQ14397 625 aa15.71■□□□□ 0.11
TTC3-221ENST00000488522 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
TTC3-221ENST00000488522 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
TTC3-221ENST00000488522 G2E3Q7L622 706 aa15.71■□□□□ 0.11
TTC3-221ENST00000488522 TSR2Q969E8 191 aaKnown RBP15.71■□□□□ 0.11
TTC3-221ENST00000488522 SCAF8Q9UPN6 1271 aaKnown RBP15.71■□□□□ 0.11
TTC3-221ENST00000488522 HTTP42858 3142 aa15.71■□□□□ 0.11
TTC3-221ENST00000488522 KLRK1P26718 216 aa15.7■□□□□ 0.1
TTC3-221ENST00000488522 MAP3K11Q16584 847 aa15.7■□□□□ 0.1
TTC3-221ENST00000488522 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
TTC3-221ENST00000488522 MTMR14Q8NCE2 650 aa15.7■□□□□ 0.1
TTC3-221ENST00000488522 SSC5DA1L4H1 1573 aa15.7■□□□□ 0.1
TTC3-221ENST00000488522 UNCXA6NJT0 531 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 GPR25O00155 361 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 SASH1O94885 1247 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 TBC1D8O95759 1140 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 FLIIQ13045 1269 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 PRPF38BQ5VTL8 546 aaKnown RBP15.69■□□□□ 0.1
TTC3-221ENST00000488522 ARMC9Q7Z3E5 817 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 WWC1Q8IX03 1113 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 LINS1Q8NG48 757 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 HDAC9Q9UKV0 1011 aa15.69■□□□□ 0.1
TTC3-221ENST00000488522 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
TTC3-221ENST00000488522 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
TTC3-221ENST00000488522 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
TTC3-221ENST00000488522 SPRYD7Q5W111 196 aa15.68■□□□□ 0.1
TTC3-221ENST00000488522 FBXO46Q6PJ61 603 aaPredicted RBP15.68■□□□□ 0.1
TTC3-221ENST00000488522 MYH16Q9H6N6 1097 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms