RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
EPHA1-205ENST00000488068 TOB2Q14106 344 aaPredicted RBP17.65■□□□□ 0.42
EPHA1-205ENST00000488068 MBD3O95983 291 aa17.64■□□□□ 0.41
EPHA1-205ENST00000488068 SYT1P21579 422 aa17.64■□□□□ 0.41
EPHA1-205ENST00000488068 NASPP49321 788 aaPredicted RBP17.64■□□□□ 0.41
EPHA1-205ENST00000488068 FOXD4L5Q5VV16 416 aaPredicted RBP17.64■□□□□ 0.41
EPHA1-205ENST00000488068 FOXD4L4Q8WXT5 416 aaPredicted RBP17.64■□□□□ 0.41
EPHA1-205ENST00000488068 ZNF652Q9Y2D9 606 aa17.64■□□□□ 0.41
EPHA1-205ENST00000488068 GJB2P29033 226 aa17.64■□□□□ 0.41
EPHA1-205ENST00000488068 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
EPHA1-205ENST00000488068 FAM98CQ17RN3 349 aaKnown RBP17.64■□□□□ 0.41
EPHA1-205ENST00000488068 FNBP4Q8N3X1 1017 aaPredicted RBP17.64■□□□□ 0.41
EPHA1-205ENST00000488068 NGLY1Q96IV0 654 aa17.64■□□□□ 0.41
EPHA1-205ENST00000488068 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
EPHA1-205ENST00000488068 HSPD1P10809 573 aaKnown RBP17.63■□□□□ 0.41
EPHA1-205ENST00000488068 ATP6V1DQ9Y5K8 247 aa17.63■□□□□ 0.41
EPHA1-205ENST00000488068 TCHHQ07283 1943 aa17.63■□□□□ 0.41
EPHA1-205ENST00000488068 CLEC4GQ6UXB4 293 aa17.63■□□□□ 0.41
EPHA1-205ENST00000488068 ZSCAN30Q86W11 494 aa17.63■□□□□ 0.41
EPHA1-205ENST00000488068 KCNQ2O43526 872 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 TTF1Q15361 905 aaPredicted RBP17.62■□□□□ 0.41
EPHA1-205ENST00000488068 C8orf37Q96NL8 207 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 SCN7AQ01118 1682 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 NHSQ6T4R5 1651 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 ZAP70P43403 619 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 ZNF445P59923 1031 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 PUM3Q15397 648 aaKnown RBP17.62■□□□□ 0.41
EPHA1-205ENST00000488068 ZSCAN25Q6NSZ9 544 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 TMEM87AQ8NBN3 555 aa17.62■□□□□ 0.41
EPHA1-205ENST00000488068 NTSR2O95665 410 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 UQCRFS1P1P0C7P4 283 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 SCARF1Q14162 830 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 GPT2Q8TD30 523 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.61■□□□□ 0.41
EPHA1-205ENST00000488068 SPATA31A6Q5VVP1 1343 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 M0R2C6 588 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 F13A1P00488 732 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 FGFR2P21802 821 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
EPHA1-205ENST00000488068 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
EPHA1-205ENST00000488068 CCDC152Q4G0S7 254 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 LPIN2Q92539 896 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 APPBP2Q92624 585 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 OSBP2Q969R2 916 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 CNTNAP4Q9C0A0 1308 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 CTNNA3Q9UI47 895 aa17.61■□□□□ 0.41
EPHA1-205ENST00000488068 NIP7Q9Y221 180 aaKnown RBP eCLIP17.61■□□□□ 0.41
EPHA1-205ENST00000488068 BTAF1O14981 1849 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 PDCP20941 246 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 MCAMP43121 646 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 ATRNO75882 1429 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 CASZ1Q86V15 1759 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 DOCK2Q92608 1830 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 CAVIN1Q6NZI2 390 aaKnown RBP17.6■□□□□ 0.41
EPHA1-205ENST00000488068 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
EPHA1-205ENST00000488068 OFD1O75665 1012 aa17.59■□□□□ 0.41
EPHA1-205ENST00000488068 HCLS1P14317 486 aaPredicted RBP17.59■□□□□ 0.41
EPHA1-205ENST00000488068 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
EPHA1-205ENST00000488068 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
EPHA1-205ENST00000488068 STOX1Q6ZVD7 989 aa17.59■□□□□ 0.41
EPHA1-205ENST00000488068 TCEANC2Q96MN5 208 aa17.59■□□□□ 0.41
EPHA1-205ENST00000488068 MTMR6Q9Y217 621 aa17.59■□□□□ 0.41
EPHA1-205ENST00000488068 SLC5A1P13866 664 aa17.58■□□□□ 0.41
EPHA1-205ENST00000488068 Q6ZUG5 572 aa17.58■□□□□ 0.41
EPHA1-205ENST00000488068 LINC00116Q8NCU8 138 aa17.58■□□□□ 0.41
EPHA1-205ENST00000488068 CHAMP1Q96JM3 812 aa17.58■□□□□ 0.41
EPHA1-205ENST00000488068 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.4
EPHA1-205ENST00000488068 WASHC4Q2M389 1173 aa17.58■□□□□ 0.4
EPHA1-205ENST00000488068 ZSCAN23Q3MJ62 389 aa17.58■□□□□ 0.4
EPHA1-205ENST00000488068 CCDC102BQ68D86 513 aa17.58■□□□□ 0.4
EPHA1-205ENST00000488068 ANP32BQ92688 251 aaKnown RBP17.58■□□□□ 0.4
EPHA1-205ENST00000488068 MPHOSPH8Q99549 860 aa17.58■□□□□ 0.4
EPHA1-205ENST00000488068 AGXT2Q9BYV1 514 aa17.58■□□□□ 0.4
EPHA1-205ENST00000488068 GTF3C6Q969F1 213 aa17.58■□□□□ 0.4
EPHA1-205ENST00000488068 EXOSC10Q01780 885 aaKnown RBP17.57■□□□□ 0.4
EPHA1-205ENST00000488068 RC3H1Q5TC82 1133 aaKnown RBP17.57■□□□□ 0.4
EPHA1-205ENST00000488068 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
EPHA1-205ENST00000488068 E7EWF7 191 aa17.57■□□□□ 0.4
EPHA1-205ENST00000488068 ADD2P35612 726 aa17.57■□□□□ 0.4
EPHA1-205ENST00000488068 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
EPHA1-205ENST00000488068 UBE3CQ15386 1083 aa17.56■□□□□ 0.4
EPHA1-205ENST00000488068 FBXL16Q8N461 479 aa17.56■□□□□ 0.4
EPHA1-205ENST00000488068 MSNP26038 577 aaKnown RBP17.56■□□□□ 0.4
EPHA1-205ENST00000488068 CSPP1Q1MSJ5 1256 aa17.56■□□□□ 0.4
EPHA1-205ENST00000488068 LARP1BQ659C4 914 aaKnown RBP17.56■□□□□ 0.4
EPHA1-205ENST00000488068 PI16Q6UXB8 463 aa17.56■□□□□ 0.4
EPHA1-205ENST00000488068 PHKA1P46020 1223 aa17.55■□□□□ 0.4
EPHA1-205ENST00000488068 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.55■□□□□ 0.4
EPHA1-205ENST00000488068 USP48Q86UV5 1035 aa17.55■□□□□ 0.4
EPHA1-205ENST00000488068 USP21Q9UK80 565 aa17.55■□□□□ 0.4
EPHA1-205ENST00000488068 COL24A1Q17RW2 1714 aa17.55■□□□□ 0.4
EPHA1-205ENST00000488068 LY75O60449 1722 aa17.55■□□□□ 0.4
EPHA1-205ENST00000488068 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
EPHA1-205ENST00000488068 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
EPHA1-205ENST00000488068 SYAP1Q96A49 352 aaPredicted RBP17.55■□□□□ 0.4
EPHA1-205ENST00000488068 LLPHQ9BRT6 129 aaKnown RBP17.55■□□□□ 0.4
EPHA1-205ENST00000488068 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
EPHA1-205ENST00000488068 FOXP2O15409 715 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms