RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 BMP3P12645 472 aa5.55□□□□□ -1.52
R3HDM1-219ENST00000488035 LMOD1P29536 600 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-219ENST00000488035 SRPK2P78362 688 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-219ENST00000488035 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-219ENST00000488035 ARXQ96QS3 562 aa5.55□□□□□ -1.52
R3HDM1-219ENST00000488035 FAM196BA6NMK8 535 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 PRNPP04156 253 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 JUNBP17275 347 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 CRTC2Q53ET0 693 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 CEP135Q66GS9 1140 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 OR13H1Q8NG92 308 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 LACRTQ9GZZ8 138 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 ATG3Q9NT62 314 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 FAM13BQ9NYF5 915 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 KCNK4Q9NYG8 393 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 PIM2Q9P1W9 311 aa5.54□□□□□ -1.52
R3HDM1-219ENST00000488035 WDR64B1ANS9 1081 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L15C9J2P7 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L10C9JJH3 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L13C9JLJ4 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L12C9JPN9 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L11C9JVI0 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L21D6R901 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L18D6R9N7 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L22D6RA61 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L17D6RBQ6 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L19D6RCP7 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L20D6RJB6 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 USP17L24Q0WX57 530 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 CPSF6Q16630 551 aaKnown RBP eCLIP5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 CDCA8Q53HL2 280 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 TXNDC11Q6PKC3 985 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 SPOCD1Q6ZMY3 1216 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 NFXL1Q6ZNB6 911 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 FBXL18Q96ME1 805 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 CARD10Q9BWT7 1032 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 SEC31BQ9NQW1 1179 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 LRFN2Q9ULH4 789 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 LEMD3Q9Y2U8 911 aa5.53□□□□□ -1.52
R3HDM1-219ENST00000488035 MSMPQ1L6U9 139 aa5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 KANK4Q5T7N3 995 aaPredicted RBP5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 TTC39BQ5VTQ0 682 aaPredicted RBP5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 FDX2Q6P4F2 183 aa5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 HOMEZQ8IX15 550 aa5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 PIK3R5Q8WYR1 880 aa5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 WNT8BQ93098 351 aa5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 RNF208Q9H0X6 261 aa5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 FNDC3AQ9Y2H6 1198 aaKnown RBP5.52□□□□□ -1.53
R3HDM1-219ENST00000488035 UBAP1LF5GYI3 381 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 GAS2O43903 313 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 PTPRAP18433 802 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 CDC25BP30305 580 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 SCNN1AP37088 669 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 CABP4P57796 275 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 ATP11AP98196 1134 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 CCER1Q8TC90 406 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 UBASH3BQ8TF42 649 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 PBXIP1Q96AQ6 731 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 VRTNQ9H8Y1 702 aa5.51□□□□□ -1.53
R3HDM1-219ENST00000488035 CARNS1A5YM72 827 aa5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 FOSL1P15407 271 aa5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 BRD2P25440 801 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 HOXA10P31260 410 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 PIP4K2BP78356 416 aa5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 RETREG2Q8NC44 543 aa5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 FOXD4L4Q8WXT5 416 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 MFSD14AQ96MC6 490 aa5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 PBX4Q9BYU1 374 aa5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 OSGEPQ9NPF4 335 aa5.5□□□□□ -1.53
R3HDM1-219ENST00000488035 DDX3YO15523 660 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 ADAM11O75078 769 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 PREPP48147 710 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 COL19A1Q14993 1142 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 TRIP4Q15650 581 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 COX20Q5RI15 118 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 VSIG10LQ86VR7 867 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 TP53INP2Q8IXH6 220 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 RUSC1Q9BVN2 902 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 OSBPL1AQ9BXW6 950 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 ADAM19Q9H013 955 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 RASSF4Q9H2L5 321 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 CCDC39Q9UFE4 941 aa5.49□□□□□ -1.53
R3HDM1-219ENST00000488035 MEGF11A6BM72 1044 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 DBX1A6NMT0 343 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 H3BRJ5 948 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 KIF4AO95239 1232 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 EPHA1P21709 976 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 MAP4P27816 1152 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 COL13A1Q5TAT6 717 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 NCAPG2Q86XI2 1143 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 FAM200AQ8TCP9 573 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 KLHDC7BQ96G42 594 aa5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 METTL22Q9BUU2 404 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 SH2B1Q9NRF2 756 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-219ENST00000488035 PPP1R15AO75807 674 aaPredicted RBP5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 RXRBP28702 533 aa5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 ARL4DP49703 201 aa5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 ETFBKMTQ8IXQ9 262 aa5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 FBXL6Q8N531 539 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms