RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-217ENST00000487825 OR13H1Q8NG92 308 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 EDEM1Q92611 657 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 TTC9Q92623 222 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 SPATA31D1Q6ZQQ2 1576 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 K7ELQ4 463 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-217ENST00000487825 COL13A1Q5TAT6 717 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-217ENST00000487825 MAP3K4Q9Y6R4 1608 aa8.5□□□□□ -1.05
BRCA1-217ENST00000487825 COL17A1Q9UMD9 1497 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-217ENST00000487825 DISP3Q9P2K9 1392 aa8.49□□□□□ -1.05
BRCA1-217ENST00000487825 FHAD1B1AJZ9 1412 aa8.49□□□□□ -1.05
BRCA1-217ENST00000487825 CYP2E1P05181 493 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-217ENST00000487825 HOXD8P13378 290 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-217ENST00000487825 EIF1AXP47813 144 aaKnown RBP8.49□□□□□ -1.05
BRCA1-217ENST00000487825 ELP3Q9H9T3 547 aa8.49□□□□□ -1.05
BRCA1-217ENST00000487825 ABI2Q9NYB9 513 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-217ENST00000487825 C9orf172C9J069 976 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 ABL1P00519 1130 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 HYAL2Q12891 473 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 AAMPQ13685 434 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 ZNF438Q7Z4V0 828 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 IL22RA1Q8N6P7 574 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 TMEM63CQ9P1W3 806 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 USP21Q9UK80 565 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 TRIM33Q9UPN9 1127 aa8.48□□□□□ -1.05
BRCA1-217ENST00000487825 CUL7Q14999 1698 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 A6NHS1 94 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 PCSK2P16519 638 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
BRCA1-217ENST00000487825 FBXO11Q86XK2 927 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 TTC16Q8NEE8 873 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 SPACA7Q96KW9 195 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 GGNBP2Q9H3C7 697 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 KIF21BO75037 1637 aa8.47□□□□□ -1.05
BRCA1-217ENST00000487825 ERICH3Q5RHP9 1530 aa8.46□□□□□ -1.05
BRCA1-217ENST00000487825 PDGFAP04085 211 aa8.46□□□□□ -1.06
BRCA1-217ENST00000487825 ATP11AP98196 1134 aa8.46□□□□□ -1.06
BRCA1-217ENST00000487825 MBTPS1Q14703 1052 aa8.46□□□□□ -1.06
BRCA1-217ENST00000487825 DTWD1Q8N5C7 304 aa8.46□□□□□ -1.06
BRCA1-217ENST00000487825 LENG1Q96BZ8 264 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-217ENST00000487825 TPSG1Q9NRR2 321 aa8.46□□□□□ -1.06
BRCA1-217ENST00000487825 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
BRCA1-217ENST00000487825 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
BRCA1-217ENST00000487825 DEAF1O75398 565 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-217ENST00000487825 MZF1P28698 734 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-217ENST00000487825 ZNF211Q13398 564 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-217ENST00000487825 ADGRE1Q14246 886 aa8.45□□□□□ -1.06
BRCA1-217ENST00000487825 KANSL3Q9P2N6 904 aa8.45□□□□□ -1.06
BRCA1-217ENST00000487825 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
BRCA1-217ENST00000487825 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
BRCA1-217ENST00000487825 NRG1Q02297 640 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-217ENST00000487825 CEP135Q66GS9 1140 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 ALKBH2Q6NS38 261 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 NCAPG2Q86XI2 1143 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 RASSF4Q9H2L5 321 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 SEMA6BQ9H3T3 888 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 POLIQ9UNA4 740 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 USTQ9Y2C2 406 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-217ENST00000487825 TEX14Q8IWB6 1497 aa8.44□□□□□ -1.06
BRCA1-217ENST00000487825 ADAMTSL3P82987 1691 aa8.43□□□□□ -1.06
BRCA1-217ENST00000487825 FAM13AO94988 1023 aa8.43□□□□□ -1.06
BRCA1-217ENST00000487825 FKBP4Q02790 459 aaKnown RBP eCLIP8.43□□□□□ -1.06
BRCA1-217ENST00000487825 C1orf127Q8N9H9 656 aa8.43□□□□□ -1.06
BRCA1-217ENST00000487825 SMNDC1O75940 238 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCA1-217ENST00000487825 KIF4AO95239 1232 aa8.42□□□□□ -1.06
BRCA1-217ENST00000487825 CES1P23141 567 aa8.42□□□□□ -1.06
BRCA1-217ENST00000487825 CDC25BP30305 580 aa8.42□□□□□ -1.06
BRCA1-217ENST00000487825 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
BRCA1-217ENST00000487825 XKR5Q6UX68 686 aa8.42□□□□□ -1.06
BRCA1-217ENST00000487825 TXNRD3Q86VQ6 643 aa8.42□□□□□ -1.06
BRCA1-217ENST00000487825 PLB1Q6P1J6 1458 aa8.42□□□□□ -1.06
BRCA1-217ENST00000487825 ABCC2Q92887 1545 aa8.41□□□□□ -1.06
BRCA1-217ENST00000487825 ASXL2Q76L83 1435 aa8.41□□□□□ -1.06
BRCA1-217ENST00000487825 NPR3P17342 541 aa8.41□□□□□ -1.06
BRCA1-217ENST00000487825 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
BRCA1-217ENST00000487825 RSPO4Q2I0M5 234 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-217ENST00000487825 IGF2-ASQ6U949 168 aa8.41□□□□□ -1.06
BRCA1-217ENST00000487825 ADAMTSL4Q6UY14 1074 aa8.41□□□□□ -1.06
BRCA1-217ENST00000487825 CEP120Q8N960 986 aa8.41□□□□□ -1.06
BRCA1-217ENST00000487825 KIAA0586Q9BVV6 1533 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 DLL1O00548 723 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 SETDB1Q15047 1291 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 RETREG2Q8NC44 543 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 PBX4Q9BYU1 374 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 CCDC87Q9NVE4 849 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 PPME1Q9Y570 386 aa8.4□□□□□ -1.06
BRCA1-217ENST00000487825 PTPRMP28827 1452 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 LINC01387J3KSC0 135 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 FZD6O60353 706 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 ACPPP15309 386 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 CDC27P30260 824 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms