RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 RIPOR2Q9Y4F9 1068 aa30.79■■■□□ 2.52
HLA-C-208ENST00000487245 MYH15Q9Y2K3 1946 aa30.79■■■□□ 2.52
HLA-C-208ENST00000487245 PFKFB2O60825 505 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 IL6STP40189 918 aaPredicted RBP30.78■■■□□ 2.52
HLA-C-208ENST00000487245 EXOSC10Q01780 885 aaKnown RBP30.78■■■□□ 2.52
HLA-C-208ENST00000487245 NUP62CLQ9H1M0 184 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 ADORA1P30542 326 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 CTSWP56202 376 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 RESTQ13127 1097 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 MAP3K11Q16584 847 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 LEO1Q8WVC0 666 aaPredicted RBP30.78■■■□□ 2.52
HLA-C-208ENST00000487245 SLC4A9Q96Q91 983 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 AGXT2Q9BYV1 514 aa30.78■■■□□ 2.52
HLA-C-208ENST00000487245 DDX19AQ9NUU7 478 aaKnown RBP30.78■■■□□ 2.52
HLA-C-208ENST00000487245 R3HCC1Q9Y3T6 440 aaKnown RBP30.78■■■□□ 2.52
HLA-C-208ENST00000487245 RBM43Q6ZSC3 357 aaKnown RBP30.77■■■□□ 2.52
HLA-C-208ENST00000487245 BRF1Q92994 677 aa30.77■■■□□ 2.52
HLA-C-208ENST00000487245 SPATA32Q96LK8 384 aa30.77■■■□□ 2.52
HLA-C-208ENST00000487245 ZSCAN16Q9H4T2 348 aaPredicted RBP30.77■■■□□ 2.52
HLA-C-208ENST00000487245 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.76■■■□□ 2.52
HLA-C-208ENST00000487245 ITGA6P23229 1130 aa30.76■■■□□ 2.52
HLA-C-208ENST00000487245 ATP2B3Q16720 1220 aa30.76■■■□□ 2.52
HLA-C-208ENST00000487245 METTL24Q5JXM2 366 aa30.76■■■□□ 2.52
HLA-C-208ENST00000487245 LDHAL6AQ6ZMR3 332 aa30.76■■■□□ 2.52
HLA-C-208ENST00000487245 ZNF512BQ96KM6 892 aaPredicted RBP30.76■■■□□ 2.52
HLA-C-208ENST00000487245 E7EWF7 191 aa30.76■■■□□ 2.51
HLA-C-208ENST00000487245 GPTP24298 496 aa30.76■■■□□ 2.51
HLA-C-208ENST00000487245 WNK3Q9BYP7 1800 aa30.76■■■□□ 2.51
HLA-C-208ENST00000487245 COL16A1Q07092 1604 aaPredicted RBP30.75■■■□□ 2.51
HLA-C-208ENST00000487245 IRS4O14654 1257 aaPredicted RBP30.75■■■□□ 2.51
HLA-C-208ENST00000487245 PDE8AO60658 829 aa30.75■■■□□ 2.51
HLA-C-208ENST00000487245 LIG1P18858 919 aa30.75■■■□□ 2.51
HLA-C-208ENST00000487245 PIBF1Q8WXW3 757 aa30.75■■■□□ 2.51
HLA-C-208ENST00000487245 ZBTB1Q9Y2K1 713 aa30.75■■■□□ 2.51
HLA-C-208ENST00000487245 KIF3AQ9Y496 699 aa30.75■■■□□ 2.51
HLA-C-208ENST00000487245 M0R2C6 588 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 TPM3P06753 285 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 FBXL16Q8N461 479 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 OSBP2Q969R2 916 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 AK7Q96M32 723 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 CCDC85AQ96PX6 553 aaPredicted RBP30.74■■■□□ 2.51
HLA-C-208ENST00000487245 TRMT112Q9UI30 125 aaKnown RBP30.74■■■□□ 2.51
HLA-C-208ENST00000487245 ROBO1Q9Y6N7 1651 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 RIC1Q4ADV7 1423 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 HSP90AA2PQ14568 343 aaPredicted RBP30.74■■■□□ 2.51
HLA-C-208ENST00000487245 SLFNL1Q499Z3 407 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 FAM173BQ6P4H8 233 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 FAM200AQ8TCP9 573 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 APPBP2Q92624 585 aa30.74■■■□□ 2.51
HLA-C-208ENST00000487245 MYH3P11055 1940 aa30.73■■■□□ 2.51
HLA-C-208ENST00000487245 JAK2O60674 1132 aa30.73■■■□□ 2.51
HLA-C-208ENST00000487245 HMGN5P82970 282 aaKnown RBP30.73■■■□□ 2.51
HLA-C-208ENST00000487245 TPRNQ4KMQ1 711 aa30.73■■■□□ 2.51
HLA-C-208ENST00000487245 ZSCAN25Q6NSZ9 544 aa30.73■■■□□ 2.51
HLA-C-208ENST00000487245 GREM2Q9H772 168 aa30.73■■■□□ 2.51
HLA-C-208ENST00000487245 SASS6Q6UVJ0 657 aa30.72■■■□□ 2.51
HLA-C-208ENST00000487245 DZIP3Q86Y13 1208 aaKnown RBP30.72■■■□□ 2.51
HLA-C-208ENST00000487245 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.72■■■□□ 2.51
HLA-C-208ENST00000487245 CLSTN2Q9H4D0 955 aa30.72■■■□□ 2.51
HLA-C-208ENST00000487245 CNNM1Q9NRU3 951 aa30.72■■■□□ 2.51
HLA-C-208ENST00000487245 THRAP3Q9Y2W1 955 aaKnown RBP30.72■■■□□ 2.51
HLA-C-208ENST00000487245 SCRN1Q12765 414 aa30.72■■■□□ 2.51
HLA-C-208ENST00000487245 WASHC4Q2M389 1173 aa30.72■■■□□ 2.51
HLA-C-208ENST00000487245 NAA16Q6N069 864 aaPredicted RBP30.72■■■□□ 2.51
HLA-C-208ENST00000487245 SYTL4Q96C24 671 aaPredicted RBP30.72■■■□□ 2.51
HLA-C-208ENST00000487245 ZNF274Q96GC6 653 aaPredicted RBP30.72■■■□□ 2.51
HLA-C-208ENST00000487245 NUP98P52948 1817 aa30.71■■■□□ 2.51
HLA-C-208ENST00000487245 GOLGA6L4A6NEF3 574 aa30.71■■■□□ 2.51
HLA-C-208ENST00000487245 ZAP70P43403 619 aa30.71■■■□□ 2.51
HLA-C-208ENST00000487245 ZNF34Q8IZ26 560 aa30.71■■■□□ 2.51
HLA-C-208ENST00000487245 TYRO3Q06418 890 aa30.7■■■□□ 2.51
HLA-C-208ENST00000487245 TTF1Q15361 905 aaPredicted RBP30.7■■■□□ 2.51
HLA-C-208ENST00000487245 SYNE4Q8N205 404 aa30.7■■■□□ 2.51
HLA-C-208ENST00000487245 MRVI1Q9Y6F6 885 aa30.7■■■□□ 2.51
HLA-C-208ENST00000487245 H3BQV1 296 aa30.7■■■□□ 2.5
HLA-C-208ENST00000487245 IMMTQ16891 758 aaKnown RBP30.7■■■□□ 2.5
HLA-C-208ENST00000487245 IFFO2Q5TF58 517 aa30.7■■■□□ 2.5
HLA-C-208ENST00000487245 TNMDQ9H2S6 317 aa30.7■■■□□ 2.5
HLA-C-208ENST00000487245 LRRC2Q9BYS8 371 aa30.69■■■□□ 2.5
HLA-C-208ENST00000487245 DACT1Q9NYF0 836 aa30.69■■■□□ 2.5
HLA-C-208ENST00000487245 TFIP11Q9UBB9 837 aaKnown RBP30.69■■■□□ 2.5
HLA-C-208ENST00000487245 CFAP45Q9UL16 551 aa30.69■■■□□ 2.5
HLA-C-208ENST00000487245 NSUN7Q8NE18 718 aaKnown RBP30.68■■■□□ 2.5
HLA-C-208ENST00000487245 AP5Z1O43299 807 aa30.67■■■□□ 2.5
HLA-C-208ENST00000487245 SCARF1Q14162 830 aa30.67■■■□□ 2.5
HLA-C-208ENST00000487245 VGLL2Q8N8G2 317 aa30.67■■■□□ 2.5
HLA-C-208ENST00000487245 SPTLC3Q9NUV7 552 aa30.67■■■□□ 2.5
HLA-C-208ENST00000487245 APOBRQ0VD83 1088 aa30.67■■■□□ 2.5
HLA-C-208ENST00000487245 ATL3Q6DD88 541 aa30.67■■■□□ 2.5
HLA-C-208ENST00000487245 PGBD1Q96JS3 809 aa30.67■■■□□ 2.5
HLA-C-208ENST00000487245 PDE8BO95263 885 aa30.66■■■□□ 2.5
HLA-C-208ENST00000487245 MYH7P12883 1935 aa30.66■■■□□ 2.5
HLA-C-208ENST00000487245 UQCRFS1P1P0C7P4 283 aa30.65■■■□□ 2.5
HLA-C-208ENST00000487245 EVCP57679 992 aa30.65■■■□□ 2.5
HLA-C-208ENST00000487245 DOT1LQ8TEK3 1739 aa30.65■■■□□ 2.5
HLA-C-208ENST00000487245 KAT6BQ8WYB5 2073 aa30.65■■■□□ 2.5
HLA-C-208ENST00000487245 EIF5P55010 431 aaKnown RBP30.65■■■□□ 2.5
HLA-C-208ENST00000487245 TBC1D2BQ9UPU7 963 aa30.65■■■□□ 2.5
HLA-C-208ENST00000487245 MROH5Q6ZUA9 1318 aa30.64■■■□□ 2.5
HLA-C-208ENST00000487245 SALL1Q9NSC2 1324 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms