RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NBPF9Q3BBW0 867 aa25.04■■□□□ 1.6
SMPDL3A-202ENST00000487215 DACT2Q5SW24 774 aa25.04■■□□□ 1.6
SMPDL3A-202ENST00000487215 PRAMEF18Q5VWM3 479 aa25.04■■□□□ 1.6
SMPDL3A-202ENST00000487215 KSR2Q6VAB6 950 aa25.04■■□□□ 1.6
SMPDL3A-202ENST00000487215 MXD3Q9BW11 206 aa25.04■■□□□ 1.6
SMPDL3A-202ENST00000487215 CHMP4AQ9BY43 222 aa25.04■■□□□ 1.6
SMPDL3A-202ENST00000487215 TNRC18O15417 2968 aaPredicted RBP25.03■■□□□ 1.6
SMPDL3A-202ENST00000487215 PI4KAP2A4QPH2 592 aa25.03■■□□□ 1.6
SMPDL3A-202ENST00000487215 UBE2Q2LH0YL09 131 aa25.03■■□□□ 1.6
SMPDL3A-202ENST00000487215 PI4KAP1Q8N8J0 262 aa25.03■■□□□ 1.6
SMPDL3A-202ENST00000487215 ZNF646O15015 1829 aaPredicted RBP25.02■■□□□ 1.6
SMPDL3A-202ENST00000487215 CCT4P50991 539 aaKnown RBP25.02■■□□□ 1.6
SMPDL3A-202ENST00000487215 SPEF2Q9C093 1822 aa25.02■■□□□ 1.6
SMPDL3A-202ENST00000487215 CWF19L2Q2TBE0 894 aaKnown RBP25.01■■□□□ 1.59
SMPDL3A-202ENST00000487215 FBXW7Q969H0 707 aa25.01■■□□□ 1.59
SMPDL3A-202ENST00000487215 WNT10BO00744 389 aa25■■□□□ 1.59
SMPDL3A-202ENST00000487215 NEXNQ0ZGT2 675 aa25■■□□□ 1.59
SMPDL3A-202ENST00000487215 OGFOD1Q8N543 542 aa25■■□□□ 1.59
SMPDL3A-202ENST00000487215 MYO3BQ8WXR4 1341 aa25■■□□□ 1.59
SMPDL3A-202ENST00000487215 NEURL1BA8MQ27 555 aa24.99■■□□□ 1.59
SMPDL3A-202ENST00000487215 STRIP1Q5VSL9 837 aa24.99■■□□□ 1.59
SMPDL3A-202ENST00000487215 TXNRD3Q86VQ6 643 aa24.99■■□□□ 1.59
SMPDL3A-202ENST00000487215 COA1Q9GZY4 146 aa24.99■■□□□ 1.59
SMPDL3A-202ENST00000487215 MYH3P11055 1940 aa24.98■■□□□ 1.59
SMPDL3A-202ENST00000487215 TTLL12Q14166 644 aaPredicted RBP24.98■■□□□ 1.59
SMPDL3A-202ENST00000487215 TSR2Q969E8 191 aaKnown RBP24.98■■□□□ 1.59
SMPDL3A-202ENST00000487215 SASH1O94885 1247 aa24.97■■□□□ 1.59
SMPDL3A-202ENST00000487215 TBC1D8O95759 1140 aa24.97■■□□□ 1.59
SMPDL3A-202ENST00000487215 UBE3BQ7Z3V4 1068 aa24.97■■□□□ 1.59
SMPDL3A-202ENST00000487215 STK31Q9BXU1 1019 aa24.97■■□□□ 1.59
SMPDL3A-202ENST00000487215 HPS5Q9UPZ3 1129 aa24.97■■□□□ 1.59
SMPDL3A-202ENST00000487215 LEMD3Q9Y2U8 911 aa24.97■■□□□ 1.59
SMPDL3A-202ENST00000487215 H7C1W4 665 aa24.96■■□□□ 1.59
SMPDL3A-202ENST00000487215 NF2P35240 595 aa24.96■■□□□ 1.59
SMPDL3A-202ENST00000487215 IGHMBP2P38935 993 aaKnown RBP24.96■■□□□ 1.59
SMPDL3A-202ENST00000487215 ZNF296Q8WUU4 475 aaPredicted RBP24.96■■□□□ 1.59
SMPDL3A-202ENST00000487215 KLRK1P26718 216 aa24.95■■□□□ 1.58
SMPDL3A-202ENST00000487215 G2E3Q7L622 706 aa24.95■■□□□ 1.58
SMPDL3A-202ENST00000487215 HDAC9Q9UKV0 1011 aa24.95■■□□□ 1.58
SMPDL3A-202ENST00000487215 ZNF804BA4D1E1 1349 aa24.94■■□□□ 1.58
SMPDL3A-202ENST00000487215 TM4SF4P48230 202 aa24.94■■□□□ 1.58
SMPDL3A-202ENST00000487215 MKRN3Q13064 507 aaKnown RBP24.94■■□□□ 1.58
SMPDL3A-202ENST00000487215 ITGA6P23229 1130 aa24.93■■□□□ 1.58
SMPDL3A-202ENST00000487215 MMP14P50281 582 aa24.93■■□□□ 1.58
SMPDL3A-202ENST00000487215 PKN2Q16513 984 aaKnown RBP24.93■■□□□ 1.58
SMPDL3A-202ENST00000487215 TTLL5Q6EMB2 1281 aa24.93■■□□□ 1.58
SMPDL3A-202ENST00000487215 KIAA0825Q8IV33 1275 aa24.93■■□□□ 1.58
SMPDL3A-202ENST00000487215 PLA2G12BQ9BX93 195 aa24.93■■□□□ 1.58
SMPDL3A-202ENST00000487215 TWISTNBQ3B726 338 aaPredicted RBP24.92■■□□□ 1.58
SMPDL3A-202ENST00000487215 APOBEC3FQ8IUX4 373 aaKnown RBP24.92■■□□□ 1.58
SMPDL3A-202ENST00000487215 ANKRD2Q9GZV1 360 aa24.92■■□□□ 1.58
SMPDL3A-202ENST00000487215 GPR25O00155 361 aa24.91■■□□□ 1.58
SMPDL3A-202ENST00000487215 SLC4A2P04920 1241 aa24.91■■□□□ 1.58
SMPDL3A-202ENST00000487215 PTPN12Q05209 780 aaKnown RBP24.91■■□□□ 1.58
SMPDL3A-202ENST00000487215 PRKG1Q13976 671 aa24.91■■□□□ 1.58
SMPDL3A-202ENST00000487215 GCKRQ14397 625 aa24.91■■□□□ 1.58
SMPDL3A-202ENST00000487215 NOM1Q5C9Z4 860 aaKnown RBP24.91■■□□□ 1.58
SMPDL3A-202ENST00000487215 ZBED3Q96IU2 234 aaPredicted RBP24.91■■□□□ 1.58
SMPDL3A-202ENST00000487215 CASP7P55210 303 aa24.9■■□□□ 1.58
SMPDL3A-202ENST00000487215 GTF2IP78347 998 aa24.9■■□□□ 1.58
SMPDL3A-202ENST00000487215 SREBF2Q12772 1141 aa24.9■■□□□ 1.58
SMPDL3A-202ENST00000487215 ARMC9Q7Z3E5 817 aa24.9■■□□□ 1.58
SMPDL3A-202ENST00000487215 MPHOSPH8Q99549 860 aa24.9■■□□□ 1.58
SMPDL3A-202ENST00000487215 CSF1RP07333 972 aa24.89■■□□□ 1.58
SMPDL3A-202ENST00000487215 PDE4DIPQ5VU43 2346 aa24.88■■□□□ 1.57
SMPDL3A-202ENST00000487215 CHRNDQ07001 517 aa24.88■■□□□ 1.57
SMPDL3A-202ENST00000487215 FLIIQ13045 1269 aa24.88■■□□□ 1.57
SMPDL3A-202ENST00000487215 CCDC27Q2M243 656 aa24.88■■□□□ 1.57
SMPDL3A-202ENST00000487215 LDLRAD1Q5T700 205 aa24.88■■□□□ 1.57
SMPDL3A-202ENST00000487215 KCNJ4P48050 445 aa24.87■■□□□ 1.57
SMPDL3A-202ENST00000487215 WWC1Q8IX03 1113 aa24.87■■□□□ 1.57
SMPDL3A-202ENST00000487215 CFHR5Q9BXR6 569 aa24.87■■□□□ 1.57
SMPDL3A-202ENST00000487215 CD209Q9NNX6 404 aa24.87■■□□□ 1.57
SMPDL3A-202ENST00000487215 ANGEL1Q9UNK9 670 aaKnown RBP24.87■■□□□ 1.57
SMPDL3A-202ENST00000487215 COL1A1P02452 1464 aaPredicted RBP24.87■■□□□ 1.57
SMPDL3A-202ENST00000487215 SPRYD7Q5W111 196 aa24.86■■□□□ 1.57
SMPDL3A-202ENST00000487215 R3HDMLQ9H3Y0 253 aa24.86■■□□□ 1.57
SMPDL3A-202ENST00000487215 MYH16Q9H6N6 1097 aa24.86■■□□□ 1.57
SMPDL3A-202ENST00000487215 FZD1Q9UP38 647 aa24.86■■□□□ 1.57
SMPDL3A-202ENST00000487215 IRS2Q9Y4H2 1338 aa24.86■■□□□ 1.57
SMPDL3A-202ENST00000487215 PRPF38BQ5VTL8 546 aaKnown RBP24.85■■□□□ 1.57
SMPDL3A-202ENST00000487215 FBXO46Q6PJ61 603 aaPredicted RBP24.85■■□□□ 1.57
SMPDL3A-202ENST00000487215 DNAAF4Q8WXU2 420 aa24.85■■□□□ 1.57
SMPDL3A-202ENST00000487215 PCDH10Q9P2E7 1040 aa24.85■■□□□ 1.57
SMPDL3A-202ENST00000487215 SNAP23O00161 211 aa24.84■■□□□ 1.57
SMPDL3A-202ENST00000487215 FKTNO75072 461 aa24.84■■□□□ 1.57
SMPDL3A-202ENST00000487215 FKBP5Q13451 457 aaPredicted RBP24.84■■□□□ 1.57
SMPDL3A-202ENST00000487215 DLGAP5Q15398 846 aa24.84■■□□□ 1.57
SMPDL3A-202ENST00000487215 CERS5Q8N5B7 392 aa24.84■■□□□ 1.57
SMPDL3A-202ENST00000487215 LINS1Q8NG48 757 aa24.84■■□□□ 1.57
SMPDL3A-202ENST00000487215 DEFB129Q9H1M3 183 aa24.84■■□□□ 1.57
SMPDL3A-202ENST00000487215 ANKRD18BA2A2Z9 1011 aa24.83■■□□□ 1.57
SMPDL3A-202ENST00000487215 CCDC184Q52MB2 194 aa24.83■■□□□ 1.57
SMPDL3A-202ENST00000487215 SSC5DA1L4H1 1573 aa24.83■■□□□ 1.57
SMPDL3A-202ENST00000487215 IL16Q14005 1332 aa24.83■■□□□ 1.56
SMPDL3A-202ENST00000487215 TAF5LO75529 589 aa24.82■■□□□ 1.56
SMPDL3A-202ENST00000487215 C15orf52Q6ZUT6 534 aaKnown RBP24.82■■□□□ 1.56
SMPDL3A-202ENST00000487215 MTMR14Q8NCE2 650 aa24.82■■□□□ 1.56
SMPDL3A-202ENST00000487215 PCDHAC2Q9Y5I4 1007 aa24.82■■□□□ 1.56
SMPDL3A-202ENST00000487215 MAP3K11Q16584 847 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms