RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 UNC13BO14795 1591 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 ERVK-7P63135 1459 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 OPLAHO14841 1288 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 USP5P45974 858 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 ARSDP51689 593 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 PTSQ03393 145 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 TTC16Q8NEE8 873 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 KIFC2Q96AC6 838 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 NUDT16Q96DE0 195 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 CPS1P31327 1500 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 NOS1P29475 1434 aa9.03□□□□□ -0.96
RTFDC1-209ENST00000487211 GCC2Q8IWJ2 1684 aa9.02□□□□□ -0.97
RTFDC1-209ENST00000487211 EFHC2Q5JST6 749 aa9.02□□□□□ -0.97
RTFDC1-209ENST00000487211 GJD3Q8N144 294 aa9.02□□□□□ -0.97
RTFDC1-209ENST00000487211 DMRTB1Q96MA1 342 aa9.02□□□□□ -0.97
RTFDC1-209ENST00000487211 CEP63Q96MT8 703 aa9.02□□□□□ -0.97
RTFDC1-209ENST00000487211 SLC52A1Q9NWF4 448 aa9.02□□□□□ -0.97
RTFDC1-209ENST00000487211 ZC3H13Q5T200 1668 aaKnown RBP9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 RBM47A0AV96 593 aaKnown RBP9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 C8orf34Q49A92 452 aa9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 NLRP8Q86W28 1048 aa9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 THEMISQ8N1K5 641 aaPredicted RBP9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 GIPC2Q8TF65 315 aa9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 FAM129BQ96TA1 746 aa9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 GMPR2Q9P2T1 348 aaKnown RBP9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 USP20Q9Y2K6 914 aa9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 IQGAP3Q86VI3 1631 aa9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 EP400Q96L91 3159 aa9.01□□□□□ -0.97
RTFDC1-209ENST00000487211 EFCAB6Q5THR3 1501 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 SLC35F4A4IF30 521 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 GPR182O15218 404 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 TREHO43280 583 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 INPP5BP32019 993 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 PLCB3Q01970 1234 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 TYRO3Q06418 890 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 CMTR1Q8N1G2 835 aaKnown RBP9□□□□□ -0.97
RTFDC1-209ENST00000487211 TRIM47Q96LD4 638 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 PCGF6Q9BYE7 350 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 RTCBQ9Y3I0 505 aaKnown RBP9□□□□□ -0.97
RTFDC1-209ENST00000487211 PLA2R1Q13018 1463 aa9□□□□□ -0.97
RTFDC1-209ENST00000487211 RPRD2Q5VT52 1461 aaKnown RBP9□□□□□ -0.97
RTFDC1-209ENST00000487211 RPLP1P05386 114 aaKnown RBP8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 EAPPQ56P03 285 aaPredicted RBP8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 Q6ZNB5 142 aa8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 ZCCHC2Q9C0B9 1178 aaKnown RBP8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 NIF3L1Q9GZT8 377 aa8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 GGNBP2Q9H3C7 697 aa8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 A2ML1A8K2U0 1454 aa8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 NLRP1Q9C000 1473 aa8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 TET3O43151 1660 aa8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 STRCP1A6NGW2 1772 aa8.99□□□□□ -0.97
RTFDC1-209ENST00000487211 E9PCH4 1651 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 CDK12Q9NYV4 1490 aaPredicted RBP8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 A6NHS1 94 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 IGHA2P01877 340 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 P4HBP07237 508 aaKnown RBP8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 EPB42P16452 691 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 ZNF16P17020 682 aaPredicted RBP8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 LTKP29376 864 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 MAPK8P45983 427 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 EHHADHQ08426 723 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 DSC3Q14574 896 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 LBRQ14739 615 aaKnown RBP8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 COL19A1Q14993 1142 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 ZNF326Q5BKZ1 582 aaKnown RBP8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 FBXO33Q7Z6M2 555 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 CCDC155Q8N6L0 562 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 NUCKS1Q9H1E3 243 aaKnown RBP8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 BRD7Q9NPI1 651 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 SYNMO15061 1565 aa8.98□□□□□ -0.97
RTFDC1-209ENST00000487211 FMR1Q06787 632 aaKnown RBP eCLIP8.97□□□□□ -0.97
RTFDC1-209ENST00000487211 SAMD5Q5TGI4 173 aa8.97□□□□□ -0.97
RTFDC1-209ENST00000487211 ANKLE2Q86XL3 938 aa8.97□□□□□ -0.97
RTFDC1-209ENST00000487211 UGGT1Q9NYU2 1555 aa8.96□□□□□ -0.97
RTFDC1-209ENST00000487211 CEP170BQ9Y4F5 1589 aaPredicted RBP8.96□□□□□ -0.97
RTFDC1-209ENST00000487211 H7C1W4 665 aa8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 ATXN7O15265 892 aaPredicted RBP8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 THBS1P07996 1170 aa8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 SNRPBP14678 240 aaKnown RBP8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 TAGLNQ01995 201 aaKnown RBP8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 FIGNL1Q6PIW4 674 aa8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 ALKBH8Q96BT7 664 aaKnown RBP8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 FNDC3AQ9Y2H6 1198 aaKnown RBP8.96□□□□□ -0.98
RTFDC1-209ENST00000487211 LRP6O75581 1613 aa8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 MYO3AQ8NEV4 1616 aa8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 UNCXA6NJT0 531 aa8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 GRNP28799 593 aaKnown RBP8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 TRIP4Q15650 581 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 DBN1Q16643 649 aa8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 CUEDC1Q9NWM3 386 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 PCDHGC4Q9Y5F7 938 aa8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 KCNMB2Q9Y691 235 aa8.95□□□□□ -0.98
RTFDC1-209ENST00000487211 DCDC2BA2VCK2 349 aa8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 C11orf95C9JLR9 678 aaPredicted RBP8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 E9PSI1 815 aa8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 KHNYNO15037 678 aaKnown RBP8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 TRIM22Q8IYM9 498 aa8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 ANKRD30BQ9BXX2 1392 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms