RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 EIF2AK2P19525 551 aaKnown RBP7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 PTPN12Q05209 780 aaKnown RBP7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 NAALADL2Q58DX5 795 aa7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 HS2ST1Q7LGA3 356 aa7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 FAM35AQ86V20 835 aa7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 TMEM102Q8N9M5 508 aaPredicted RBP7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 ASAP3Q8TDY4 903 aa7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 TNFRSF25Q93038 417 aa7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 TGIF2Q9GZN2 237 aa7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 PDE2AO00408 941 aaPredicted RBP7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 ARAFP10398 606 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 ADH6P28332 368 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 ZNF394Q53GI3 561 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 NPAS3Q8IXF0 933 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 POP1Q99575 1024 aaKnown RBP7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 BHLHE41Q9C0J9 482 aaPredicted RBP7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 RBSNQ9H1K0 784 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 MBIPQ9NS73 344 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 SLC6A14Q9UN76 642 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 PCDHGB7Q9Y5F8 929 aa7.91□□□□□ -1.14
PRPF38A-203ENST00000487160 A0A096LPE4 126 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 A0A1W2PPZ6 126 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 NEURL1BA8MQ27 555 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 FBXO24O75426 580 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 ADH7P40394 386 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 RACK1P63244 317 aaKnown RBP7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 PERM1Q5SV97 790 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 ACBD3Q9H3P7 528 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 CCSER2Q9H7U1 834 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 COPRSQ9NQ92 184 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 USP35Q9P2H5 1018 aa7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 DDX41Q9UJV9 622 aaKnown RBP7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 NSFL1CQ9UNZ2 370 aaKnown RBP7.9□□□□□ -1.14
PRPF38A-203ENST00000487160 ITPKAP23677 461 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 MAP2K3P46734 347 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 USP48Q86UV5 1035 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 FCHSD1Q86WN1 690 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 MICALL1Q8N3F8 863 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 PLD4Q96BZ4 506 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 COL25A1Q9BXS0 654 aaPredicted RBP7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 SRA1Q9HD15 236 aaKnown RBP7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 NAGPAQ9UK23 515 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 PPM1HQ9ULR3 514 aa7.89□□□□□ -1.15
PRPF38A-203ENST00000487160 IGF1RP08069 1367 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 ADARB2-AS1A8MUL3 147 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 SMNDC1O75940 238 aaKnown RBP eCLIP7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 TNNI2P48788 182 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 MAP3K10Q02779 954 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 CCDC85BQ15834 202 aaPredicted RBP7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 RNFT1Q5M7Z0 435 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 ELMSAN1Q6PJG2 1045 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 TPTE2Q6XPS3 522 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 ERMP1Q7Z2K6 904 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 MDFIQ99750 246 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 NOC4LQ9BVI4 516 aaKnown RBP7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 SMG9Q9H0W8 520 aaKnown RBP7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 MUC3BQ9H195 1237 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 ZFYVE1Q9HBF4 777 aa7.88□□□□□ -1.15
PRPF38A-203ENST00000487160 VSIG8P0DPA2 414 aa7.87□□□□□ -1.15
PRPF38A-203ENST00000487160 ADAMTSL4Q6UY14 1074 aa7.87□□□□□ -1.15
PRPF38A-203ENST00000487160 ZNF654Q8IZM8 581 aa7.87□□□□□ -1.15
PRPF38A-203ENST00000487160 ANKRD24Q8TF21 1146 aa7.87□□□□□ -1.15
PRPF38A-203ENST00000487160 LPIN3Q9BQK8 851 aa7.87□□□□□ -1.15
PRPF38A-203ENST00000487160 TRIM56Q9BRZ2 755 aaKnown RBP7.87□□□□□ -1.15
PRPF38A-203ENST00000487160 CAPN10Q9HC96 672 aa7.87□□□□□ -1.15
PRPF38A-203ENST00000487160 ERBB4Q15303 1308 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 ELOA3CA0A087WX78 387 aaPredicted RBP7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 ELOA3DA6NLF2 546 aaPredicted RBP7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 F6X3S4 739 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 TERTO14746 1132 aaKnown RBP7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 ELOA3BQ3SY89 546 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 PSAPL1Q6NUJ1 521 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 ELOA3Q8NG57 546 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 RSRP1Q9BUV0 290 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 ZNF576Q9H609 170 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 SEC31BQ9NQW1 1179 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 KBTBD4Q9NVX7 518 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 TRIM33Q9UPN9 1127 aa7.86□□□□□ -1.15
PRPF38A-203ENST00000487160 FAAP100Q0VG06 881 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 SV2BQ7L1I2 683 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 RELL1Q8IUW5 271 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 BSNDQ8WZ55 320 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 TINF2Q9BSI4 451 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 CEP44Q9C0F1 390 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 LACRTQ9GZZ8 138 aa7.85□□□□□ -1.15
PRPF38A-203ENST00000487160 MINDY4BA8MYZ0 360 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 CELA3AP09093 270 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 PTPRAP18433 802 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 ALAS2P22557 587 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 ZNF157P51786 506 aaPredicted RBP7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 RPS26P11Q5JNZ5 115 aaPredicted RBP7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 GOLGA6L1Q8N7Z2 621 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 SLC16A10Q8TF71 515 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
PRPF38A-203ENST00000487160 SREK1Q8WXA9 508 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms