RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 KIF18AQ8NI77 898 aa14.27□□□□□ -0.12
COL3A1-206ENST00000487010 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.12
COL3A1-206ENST00000487010 HELLSQ9NRZ9 838 aa14.27□□□□□ -0.12
COL3A1-206ENST00000487010 A0A087WWV3 80 aa14.27□□□□□ -0.13
COL3A1-206ENST00000487010 UBE3BQ7Z3V4 1068 aa14.27□□□□□ -0.13
COL3A1-206ENST00000487010 LRP10Q7Z4F1 713 aa14.27□□□□□ -0.13
COL3A1-206ENST00000487010 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.13
COL3A1-206ENST00000487010 AOPEPQ8N6M6 819 aa14.27□□□□□ -0.13
COL3A1-206ENST00000487010 NAT10Q9H0A0 1025 aaKnown RBP14.27□□□□□ -0.13
COL3A1-206ENST00000487010 SLC52A2Q9HAB3 445 aa14.27□□□□□ -0.13
COL3A1-206ENST00000487010 AXIN2Q9Y2T1 843 aa14.27□□□□□ -0.13
COL3A1-206ENST00000487010 PALLDQ8WX93 1383 aa14.27□□□□□ -0.13
COL3A1-206ENST00000487010 GSDMDP57764 484 aa14.26□□□□□ -0.13
COL3A1-206ENST00000487010 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 SCN11AQ9UI33 1791 aa14.26□□□□□ -0.13
COL3A1-206ENST00000487010 PDIA3P30101 505 aaKnown RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 GABPB1Q06547 395 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 FMR1NBQ8N0W7 255 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 MRPS27Q92552 414 aaKnown RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 ZNF274Q96GC6 653 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 OSBPL5Q9H0X9 879 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 TRMT1Q9NXH9 659 aaKnown RBP14.26□□□□□ -0.13
COL3A1-206ENST00000487010 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
COL3A1-206ENST00000487010 E7EWF7 191 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 GUCY1B3Q02153 619 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 ADALQ6DHV7 355 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 NBPF11Q86T75 865 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 ERO1AQ96HE7 468 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 IMPACTQ9P2X3 320 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 ABCC6O95255 1503 aa14.25□□□□□ -0.13
COL3A1-206ENST00000487010 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-206ENST00000487010 GOLIM4O00461 696 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 IGSF3O75054 1194 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 SLFNL1Q499Z3 407 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 KMT5BQ4FZB7 885 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 ZMYM1Q5SVZ6 1142 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 TICAM2Q86XR7 235 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 NFATC2IPQ8NCF5 419 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 ERCC4Q92889 916 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-206ENST00000487010 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 ZNF496Q96IT1 587 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-206ENST00000487010 PAG1Q9NWQ8 432 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 KDM6AO15550 1401 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-206ENST00000487010 CARMIL3Q8ND23 1372 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 A0A087WZG4 1122 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 A0A1W2PQ27 194 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 A0A1W2PQ64 194 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 A0A1W2PQD8 194 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 CASP7P55210 303 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 SDF4Q9BRK5 362 aa14.24□□□□□ -0.13
COL3A1-206ENST00000487010 NAP1L2Q9ULW6 460 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-206ENST00000487010 RGPD5Q99666 1765 aa14.23□□□□□ -0.13
COL3A1-206ENST00000487010 A0A0G2JLW4 131 aa14.23□□□□□ -0.13
COL3A1-206ENST00000487010 HSPD1P10809 573 aaKnown RBP14.23□□□□□ -0.13
COL3A1-206ENST00000487010 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
COL3A1-206ENST00000487010 ORAI2Q96SN7 254 aa14.23□□□□□ -0.13
COL3A1-206ENST00000487010 BCL11BQ9C0K0 894 aaPredicted RBP14.23□□□□□ -0.13
COL3A1-206ENST00000487010 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
COL3A1-206ENST00000487010 ARFGEF2Q9Y6D5 1785 aa14.23□□□□□ -0.13
COL3A1-206ENST00000487010 A0A1B0GVL5 298 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
COL3A1-206ENST00000487010 PPFIA3O75145 1194 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 SLU7O95391 586 aaKnown RBP14.22□□□□□ -0.13
COL3A1-206ENST00000487010 SNRPA1P09661 255 aaKnown RBP14.22□□□□□ -0.13
COL3A1-206ENST00000487010 FDPSP14324 419 aaKnown RBP14.22□□□□□ -0.13
COL3A1-206ENST00000487010 PIP4K2AP48426 406 aaPredicted RBP14.22□□□□□ -0.13
COL3A1-206ENST00000487010 LMBR1LQ6UX01 489 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 FBXW7Q969H0 707 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 BPIFA3Q9BQP9 254 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 KIAA1468Q9P260 1216 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 NDUFA8P51970 172 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 CHST3Q7LGC8 479 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 FBXL16Q8N461 479 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 LINC00301Q8NCQ3 95 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 NEUROD6Q96NK8 337 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 FAM53CQ9NYF3 392 aa14.22□□□□□ -0.13
COL3A1-206ENST00000487010 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL3A1-206ENST00000487010 V9GYY5 206 aaPredicted RBP14.22□□□□□ -0.13
COL3A1-206ENST00000487010 PHKG2P15735 406 aa14.21□□□□□ -0.13
COL3A1-206ENST00000487010 EVCP57679 992 aa14.21□□□□□ -0.13
COL3A1-206ENST00000487010 E4F1Q66K89 784 aaPredicted RBP14.21□□□□□ -0.13
COL3A1-206ENST00000487010 ZNF771Q7L3S4 317 aaPredicted RBP14.21□□□□□ -0.13
COL3A1-206ENST00000487010 ATG9AQ7Z3C6 839 aa14.21□□□□□ -0.13
COL3A1-206ENST00000487010 KRT222Q8N1A0 295 aa14.21□□□□□ -0.13
COL3A1-206ENST00000487010 GPR108Q9NPR9 543 aa14.21□□□□□ -0.13
COL3A1-206ENST00000487010 MAST3O60307 1309 aa14.21□□□□□ -0.13
COL3A1-206ENST00000487010 ERBB3P21860 1342 aa14.21□□□□□ -0.13
COL3A1-206ENST00000487010 SLFN14P0C7P3 912 aa14.21□□□□□ -0.14
COL3A1-206ENST00000487010 FOXO4P98177 505 aa14.21□□□□□ -0.14
COL3A1-206ENST00000487010 ELF2Q15723 593 aa14.21□□□□□ -0.14
COL3A1-206ENST00000487010 DPCR1Q3MIW9 517 aa14.21□□□□□ -0.14
COL3A1-206ENST00000487010 FBXO38Q6PIJ6 1188 aa14.21□□□□□ -0.14
COL3A1-206ENST00000487010 CCDC150Q8NCX0 1101 aa14.21□□□□□ -0.14
COL3A1-206ENST00000487010 RAPGEF4Q8WZA2 1011 aa14.21□□□□□ -0.14
COL3A1-206ENST00000487010 XPO4Q9C0E2 1151 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms