RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 COL11A2P13942 1736 aaPredicted RBP11.93□□□□□ -0.5
CTPS1-210ENST00000486889 A0A1B0GUL7 405 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 TAF5LO75529 589 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 IGHDP01880 384 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 HIBADHP31937 336 aaKnown RBP11.92□□□□□ -0.5
CTPS1-210ENST00000486889 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 NUCB1Q02818 461 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 LRRFIP1Q32MZ4 808 aaKnown RBP11.92□□□□□ -0.5
CTPS1-210ENST00000486889 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 RTFDC1Q9BY42 306 aaPredicted RBP11.92□□□□□ -0.5
CTPS1-210ENST00000486889 COA1Q9GZY4 146 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
CTPS1-210ENST00000486889 LTBP3Q9NS15 1303 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 SEMA3EO15041 775 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 PPIP5K2O43314 1243 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 SASH1O94885 1247 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 C15orf52Q6ZUT6 534 aaKnown RBP11.91□□□□□ -0.5
CTPS1-210ENST00000486889 NIM1KQ8IY84 436 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 LARGE2Q8N3Y3 721 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 C7orf43Q8WVR3 580 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 IL1RAPL2Q9NP60 686 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
CTPS1-210ENST00000486889 SPEF2Q9C093 1822 aa11.9□□□□□ -0.5
CTPS1-210ENST00000486889 TTC41PQ6P2S7 1318 aa11.9□□□□□ -0.5
CTPS1-210ENST00000486889 LMNB1P20700 586 aa11.9□□□□□ -0.5
CTPS1-210ENST00000486889 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
CTPS1-210ENST00000486889 ZGPATQ8N5A5 531 aaKnown RBP11.9□□□□□ -0.5
CTPS1-210ENST00000486889 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
CTPS1-210ENST00000486889 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
CTPS1-210ENST00000486889 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
CTPS1-210ENST00000486889 SLX4Q8IY92 1834 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 IGSF3O75054 1194 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 MX1P20591 662 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
CTPS1-210ENST00000486889 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
CTPS1-210ENST00000486889 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
CTPS1-210ENST00000486889 TIMM10P62072 90 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 TTF1Q15361 905 aaPredicted RBP11.89□□□□□ -0.51
CTPS1-210ENST00000486889 VGLL2Q8N8G2 317 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 LNPKQ9C0E8 428 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 LRRC37AA6NMS7 1700 aa11.89□□□□□ -0.51
CTPS1-210ENST00000486889 ARFGEF1Q9Y6D6 1849 aa11.88□□□□□ -0.51
CTPS1-210ENST00000486889 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
CTPS1-210ENST00000486889 GLRX3O76003 335 aaKnown RBP11.88□□□□□ -0.51
CTPS1-210ENST00000486889 FGFR2P21802 821 aa11.88□□□□□ -0.51
CTPS1-210ENST00000486889 TNIP1Q15025 636 aa11.88□□□□□ -0.51
CTPS1-210ENST00000486889 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
CTPS1-210ENST00000486889 TBC1D22AQ8WUA7 517 aa11.88□□□□□ -0.51
CTPS1-210ENST00000486889 ZNF512BQ96KM6 892 aaPredicted RBP11.88□□□□□ -0.51
CTPS1-210ENST00000486889 CCDC8Q9H0W5 538 aaPredicted RBP11.88□□□□□ -0.51
CTPS1-210ENST00000486889 POLLQ9UGP5 575 aa11.88□□□□□ -0.51
CTPS1-210ENST00000486889 AOX1Q06278 1338 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 KDM2BQ8NHM5 1336 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 ZNF609O15014 1411 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 BRCA1P38398 1863 aaKnown RBP11.87□□□□□ -0.51
CTPS1-210ENST00000486889 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
CTPS1-210ENST00000486889 EIF5BO60841 1220 aaKnown RBP11.87□□□□□ -0.51
CTPS1-210ENST00000486889 MMP14P50281 582 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 CCDC102BQ68D86 513 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 TMED8Q6PL24 325 aaPredicted RBP11.87□□□□□ -0.51
CTPS1-210ENST00000486889 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 WDR66Q8TBY9 1149 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTPS1-210ENST00000486889 EAF2Q96CJ1 260 aaPredicted RBP11.87□□□□□ -0.51
CTPS1-210ENST00000486889 ZNF277Q9NRM2 450 aaPredicted RBP11.87□□□□□ -0.51
CTPS1-210ENST00000486889 TAF1P21675 1872 aa11.87□□□□□ -0.51
CTPS1-210ENST00000486889 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
CTPS1-210ENST00000486889 AOC3Q16853 763 aa11.86□□□□□ -0.51
CTPS1-210ENST00000486889 ZSCAN25Q6NSZ9 544 aa11.86□□□□□ -0.51
CTPS1-210ENST00000486889 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
CTPS1-210ENST00000486889 FBXW7Q969H0 707 aa11.86□□□□□ -0.51
CTPS1-210ENST00000486889 DBNDD2Q9BQY9 259 aa11.86□□□□□ -0.51
CTPS1-210ENST00000486889 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.86□□□□□ -0.517e-15■■■■■ 46.2
CTPS1-210ENST00000486889 ZNRF3Q9ULT6 936 aa11.86□□□□□ -0.51
CTPS1-210ENST00000486889 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
CTPS1-210ENST00000486889 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
CTPS1-210ENST00000486889 ECE2O60344 883 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 ATP5JP18859 108 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 GYG1P46976 350 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 FBXO33Q7Z6M2 555 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 CNTROBQ8N137 903 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 SPATA5Q8NB90 893 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 FAM84BQ96KN1 310 aaPredicted RBP11.85□□□□□ -0.51
CTPS1-210ENST00000486889 CD209Q9NNX6 404 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 RNF181Q9P0P0 153 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
CTPS1-210ENST00000486889 MAST3O60307 1309 aa11.85□□□□□ -0.51
CTPS1-210ENST00000486889 USP17L3A6NCW0 530 aa11.84□□□□□ -0.51
CTPS1-210ENST00000486889 USP17L4A6NCW7 530 aa11.84□□□□□ -0.51
CTPS1-210ENST00000486889 IL1R1P14778 569 aa11.84□□□□□ -0.51
CTPS1-210ENST00000486889 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
CTPS1-210ENST00000486889 BCAMP50895 628 aa11.84□□□□□ -0.51
CTPS1-210ENST00000486889 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
CTPS1-210ENST00000486889 STRIP1Q5VSL9 837 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms