RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
COL12A1-208ENST00000486533 SF3B3Q15393 1217 aaKnown RBP11.12□□□□□ -0.63
COL12A1-208ENST00000486533 TWISTNBQ3B726 338 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-208ENST00000486533 L1TD1Q5T7N2 865 aaKnown RBP11.12□□□□□ -0.63
COL12A1-208ENST00000486533 SKAP1Q86WV1 359 aa11.12□□□□□ -0.63
COL12A1-208ENST00000486533 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
COL12A1-208ENST00000486533 TBC1D32Q96NH3 1257 aa11.12□□□□□ -0.63
COL12A1-208ENST00000486533 RTFDC1Q9BY42 306 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-208ENST00000486533 VPS33BQ9H267 617 aa11.12□□□□□ -0.63
COL12A1-208ENST00000486533 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
COL12A1-208ENST00000486533 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-208ENST00000486533 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-208ENST00000486533 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-208ENST00000486533 ZNRF3Q9ULT6 936 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
COL12A1-208ENST00000486533 LTBP1Q14766 1721 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 PI4KAP2A4QPH2 592 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 PCCAP05165 728 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-208ENST00000486533 PTMSP20962 102 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 SCNN1DP51172 638 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 KIAA2012Q0VF49 1180 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-208ENST00000486533 PI4KAP1Q8N8J0 262 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 JMYQ8N9B5 988 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 JARID2Q92833 1246 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-208ENST00000486533 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
COL12A1-208ENST00000486533 DUOX1Q9NRD9 1551 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 EPS15P42566 896 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 EXOSC9Q06265 439 aaKnown RBP11.1□□□□□ -0.63
COL12A1-208ENST00000486533 CXCL9Q07325 125 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 NEXNQ0ZGT2 675 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 KSR2Q6VAB6 950 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 ITPRIPQ8IWB1 547 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-208ENST00000486533 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-208ENST00000486533 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 COL4A1P02462 1669 aa11.1□□□□□ -0.63
COL12A1-208ENST00000486533 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 C6orf229H3BNL8 230 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 RAD17O75943 681 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 RPS8P62241 208 aaKnown RBP11.09□□□□□ -0.63
COL12A1-208ENST00000486533 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 CCDC152Q4G0S7 254 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 CNTROBQ8N137 903 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 ARHGAP45Q92619 1136 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 SEC31BQ9NQW1 1179 aa11.09□□□□□ -0.63
COL12A1-208ENST00000486533 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
COL12A1-208ENST00000486533 RIMBP2O15034 1052 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 PDE8AO60658 829 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 ITGBL1O95965 494 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-208ENST00000486533 RLBP1P12271 317 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 GMPSP49915 693 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-208ENST00000486533 GPSM2P81274 684 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 TNIP1Q15025 636 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 G2E3Q7L622 706 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 SMC5Q8IY18 1101 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 BCL2L13Q9BXK5 485 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 GPRC5DQ9NZD1 345 aa11.08□□□□□ -0.64
COL12A1-208ENST00000486533 TMEM88BA6NKF7 163 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 TRIM27P14373 513 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 SLC4A3P48751 1232 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 FKBP5Q13451 457 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-208ENST00000486533 CWF19L2Q2TBE0 894 aaKnown RBP11.07□□□□□ -0.64
COL12A1-208ENST00000486533 USP50Q70EL3 339 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-208ENST00000486533 HSCBQ8IWL3 235 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 GCC1Q96CN9 775 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 DBNDD1Q9H9R9 158 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 ANKIB1Q9P2G1 1089 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 POLLQ9UGP5 575 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 MYH3P11055 1940 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 CDHR2Q9BYE9 1310 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 CACNA1FO60840 1977 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 CTSWP56202 376 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 FLIIQ13045 1269 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 GPR101Q96P66 508 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-208ENST00000486533 EYA3Q99504 573 aa11.07□□□□□ -0.64
COL12A1-208ENST00000486533 ADARB2Q9NS39 739 aaKnown RBP11.07□□□□□ -0.64
COL12A1-208ENST00000486533 NEURL1BA8MQ27 555 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 UFL1O94874 794 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 UBE3BQ7Z3V4 1068 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 ANKRD18AQ8IVF6 992 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 TBC1D16Q8TBP0 767 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 C22orf23Q9BZE7 217 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 CHMP5Q9NZZ3 219 aa11.06□□□□□ -0.64
COL12A1-208ENST00000486533 SPEF2Q9C093 1822 aa11.05□□□□□ -0.64
COL12A1-208ENST00000486533 G3V3G9 751 aa11.05□□□□□ -0.64
COL12A1-208ENST00000486533 ECE2O60344 883 aa11.05□□□□□ -0.64
COL12A1-208ENST00000486533 FRAT2O75474 233 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-208ENST00000486533 IFFO2Q5TF58 517 aa11.05□□□□□ -0.64
COL12A1-208ENST00000486533 DNAAF4Q8WXU2 420 aa11.05□□□□□ -0.64
COL12A1-208ENST00000486533 CDC5LQ99459 802 aaKnown RBP11.05□□□□□ -0.64
COL12A1-208ENST00000486533 API5Q9BZZ5 524 aaKnown RBP11.05□□□□□ -0.64
COL12A1-208ENST00000486533 ZC3H12CQ9C0D7 883 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms