RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 ZNF609O15014 1411 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 RGS3P49796 1198 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 CAVIN4Q5BKX8 364 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 VPS37DQ86XT2 251 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 SUPT20HQ8NEM7 779 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 C7orf43Q8WVR3 580 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 XAGE2Q96GT9 111 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 EYA3Q99504 573 aa17■□□□□ 0.31
NELFCD-209ENST00000486263 FER1L6Q2WGJ9 1857 aa16.99■□□□□ 0.31
NELFCD-209ENST00000486263 G3V3G9 751 aa16.99■□□□□ 0.31
NELFCD-209ENST00000486263 FGFR2P21802 821 aa16.99■□□□□ 0.31
NELFCD-209ENST00000486263 DCAF8Q5TAQ9 597 aa16.99■□□□□ 0.31
NELFCD-209ENST00000486263 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
NELFCD-209ENST00000486263 TBC1D16Q8TBP0 767 aa16.99■□□□□ 0.31
NELFCD-209ENST00000486263 DBNDD2Q9BQY9 259 aa16.99■□□□□ 0.31
NELFCD-209ENST00000486263 LTBP3Q9NS15 1303 aa16.98■□□□□ 0.31
NELFCD-209ENST00000486263 ZC3H4Q9UPT8 1303 aaKnown RBP16.98■□□□□ 0.31
NELFCD-209ENST00000486263 MX1P20591 662 aa16.98■□□□□ 0.31
NELFCD-209ENST00000486263 LMNB1P20700 586 aa16.98■□□□□ 0.31
NELFCD-209ENST00000486263 PDE4AP27815 886 aa16.98■□□□□ 0.31
NELFCD-209ENST00000486263 ADORA1P30542 326 aa16.98■□□□□ 0.31
NELFCD-209ENST00000486263 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
NELFCD-209ENST00000486263 C9orf131Q5VYM1 1079 aa16.98■□□□□ 0.31
NELFCD-209ENST00000486263 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
NELFCD-209ENST00000486263 TLR7Q9NYK1 1049 aaKnown RBP16.98■□□□□ 0.31
NELFCD-209ENST00000486263 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
NELFCD-209ENST00000486263 CCDC88AQ3V6T2 1871 aa16.97■□□□□ 0.31
NELFCD-209ENST00000486263 ERC2O15083 957 aa16.97■□□□□ 0.31
NELFCD-209ENST00000486263 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
NELFCD-209ENST00000486263 ECHDC1Q9NTX5 307 aa16.97■□□□□ 0.31
NELFCD-209ENST00000486263 GNL3LQ9NVN8 582 aaKnown RBP16.97■□□□□ 0.31
NELFCD-209ENST00000486263 POLLQ9UGP5 575 aa16.97■□□□□ 0.31
NELFCD-209ENST00000486263 TTC41PQ6P2S7 1318 aa16.96■□□□□ 0.31
NELFCD-209ENST00000486263 NFKBIEO00221 500 aa16.96■□□□□ 0.31
NELFCD-209ENST00000486263 RIMBP2O15034 1052 aa16.96■□□□□ 0.31
NELFCD-209ENST00000486263 FRAT2O75474 233 aaPredicted RBP16.96■□□□□ 0.31
NELFCD-209ENST00000486263 PDE1AP54750 535 aa16.96■□□□□ 0.31
NELFCD-209ENST00000486263 WASHC4Q2M389 1173 aa16.96■□□□□ 0.31
NELFCD-209ENST00000486263 ZNF804AQ7Z570 1209 aa16.96■□□□□ 0.31
NELFCD-209ENST00000486263 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
NELFCD-209ENST00000486263 DICER1Q9UPY3 1922 aaKnown RBP16.96■□□□□ 0.3
NELFCD-209ENST00000486263 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.3
NELFCD-209ENST00000486263 WTIPA6NIX2 430 aaPredicted RBP16.95■□□□□ 0.3
NELFCD-209ENST00000486263 HIBADHP31937 336 aaKnown RBP16.95■□□□□ 0.3
NELFCD-209ENST00000486263 GYG1P46976 350 aa16.95■□□□□ 0.3
NELFCD-209ENST00000486263 BCAMP50895 628 aa16.95■□□□□ 0.3
NELFCD-209ENST00000486263 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
NELFCD-209ENST00000486263 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
NELFCD-209ENST00000486263 SKAP1Q86WV1 359 aa16.95■□□□□ 0.3
NELFCD-209ENST00000486263 GPR101Q96P66 508 aaPredicted RBP16.95■□□□□ 0.3
NELFCD-209ENST00000486263 PSMD1Q99460 953 aa16.95■□□□□ 0.3
NELFCD-209ENST00000486263 GPBP1L1Q9HC44 474 aaPredicted RBP16.95■□□□□ 0.3
NELFCD-209ENST00000486263 RNF181Q9P0P0 153 aa16.95■□□□□ 0.3
NELFCD-209ENST00000486263 STAP2Q9UGK3 403 aa16.95■□□□□ 0.3
NELFCD-209ENST00000486263 GLRX3O76003 335 aaKnown RBP16.94■□□□□ 0.3
NELFCD-209ENST00000486263 UQCRFS1P1P0C7P4 283 aa16.94■□□□□ 0.3
NELFCD-209ENST00000486263 RASSF7Q02833 373 aa16.94■□□□□ 0.3
NELFCD-209ENST00000486263 TSHZ3Q63HK5 1081 aa16.94■□□□□ 0.3
NELFCD-209ENST00000486263 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
NELFCD-209ENST00000486263 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
NELFCD-209ENST00000486263 TAOK3Q9H2K8 898 aa16.94■□□□□ 0.3
NELFCD-209ENST00000486263 AOX1Q06278 1338 aa16.94■□□□□ 0.3
NELFCD-209ENST00000486263 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
NELFCD-209ENST00000486263 KLRK1P26718 216 aa16.93■□□□□ 0.3
NELFCD-209ENST00000486263 PHKA1P46020 1223 aa16.93■□□□□ 0.3
NELFCD-209ENST00000486263 FAM84BQ96KN1 310 aaPredicted RBP16.93■□□□□ 0.3
NELFCD-209ENST00000486263 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
NELFCD-209ENST00000486263 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
NELFCD-209ENST00000486263 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
NELFCD-209ENST00000486263 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
NELFCD-209ENST00000486263 ATP5JP18859 108 aa16.92■□□□□ 0.3
NELFCD-209ENST00000486263 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
NELFCD-209ENST00000486263 VPS33BQ9H267 617 aa16.92■□□□□ 0.3
NELFCD-209ENST00000486263 BOLA2Q9H3K6 86 aa16.92■□□□□ 0.3
NELFCD-209ENST00000486263 PRELPP51888 382 aa16.91■□□□□ 0.3
NELFCD-209ENST00000486263 AOC3Q16853 763 aa16.91■□□□□ 0.3
NELFCD-209ENST00000486263 TXNRD3Q86VQ6 643 aa16.91■□□□□ 0.3
NELFCD-209ENST00000486263 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
NELFCD-209ENST00000486263 COA1Q9GZY4 146 aa16.91■□□□□ 0.3
NELFCD-209ENST00000486263 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
NELFCD-209ENST00000486263 ARID4AP29374 1257 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-209ENST00000486263 DOK7Q18PE1 504 aa16.9■□□□□ 0.3
NELFCD-209ENST00000486263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.9■□□□□ 0.3
NELFCD-209ENST00000486263 ZNF512BQ96KM6 892 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-209ENST00000486263 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
NELFCD-209ENST00000486263 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-209ENST00000486263 DENND2AQ9ULE3 1009 aa16.9■□□□□ 0.3
NELFCD-209ENST00000486263 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
NELFCD-209ENST00000486263 SEMA3EO15041 775 aa16.89■□□□□ 0.29
NELFCD-209ENST00000486263 IARSP41252 1262 aaKnown RBP16.89■□□□□ 0.29
NELFCD-209ENST00000486263 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
NELFCD-209ENST00000486263 TTC22Q5TAA0 569 aa16.89■□□□□ 0.29
NELFCD-209ENST00000486263 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.29
NELFCD-209ENST00000486263 CD209Q9NNX6 404 aa16.89■□□□□ 0.29
NELFCD-209ENST00000486263 ARAP2Q8WZ64 1704 aa16.89■□□□□ 0.29
NELFCD-209ENST00000486263 IRS2Q9Y4H2 1338 aa16.89■□□□□ 0.29
NELFCD-209ENST00000486263 SNED1Q8TER0 1413 aa16.88■□□□□ 0.29
NELFCD-209ENST00000486263 LTBP1Q14766 1721 aa16.88■□□□□ 0.29
NELFCD-209ENST00000486263 MAP4K4O95819 1239 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms