RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 SCN9AQ15858 1988 aa11.58□□□□□ -0.56
SHROOM3-207ENST00000485780 HMMRO75330 724 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 ATP2B4P23634 1241 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 IL15P40933 162 aaPredicted RBP11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 HTRA3P83110 453 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 C15orf52Q6ZUT6 534 aaKnown RBP11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 GGA1Q9UJY5 639 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 LEMD3Q9Y2U8 911 aa11.57□□□□□ -0.56
SHROOM3-207ENST00000485780 MYH13Q9UKX3 1938 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 ZNF609O15014 1411 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 PDE8BO95263 885 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 FGFR2P21802 821 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 EPHX2P34913 555 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 PNMA8AQ86V59 439 aaPredicted RBP11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 ANKIB1Q9P2G1 1089 aa11.56□□□□□ -0.56
SHROOM3-207ENST00000485780 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 UFL1O94874 794 aa11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 UBE4AQ14139 1066 aa11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 SIL1Q9H173 461 aa11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 ZNRF3Q9ULT6 936 aa11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 SCN4AP35499 1836 aa11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 ZNF804BA4D1E1 1349 aa11.55□□□□□ -0.56
SHROOM3-207ENST00000485780 WTIPA6NIX2 430 aaPredicted RBP11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 ZBTB22O15209 634 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 TAF5LO75529 589 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 SASH1O94885 1247 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 PUM3Q15397 648 aaKnown RBP11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 METTL24Q5JXM2 366 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 KLRG1Q96E93 195 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 EYA3Q99504 573 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 DCTPP1Q9H773 170 aa11.54□□□□□ -0.56
SHROOM3-207ENST00000485780 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 SURF6O75683 361 aaKnown RBP11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 IRX6P78412 446 aaPredicted RBP11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 TNIP1Q15025 636 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 ERC1Q8IUD2 1116 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 DNAJC5GQ8N7S2 189 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 GPR108Q9NPR9 543 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 CEP126Q9P2H0 1117 aa11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.53□□□□□ -0.56
SHROOM3-207ENST00000485780 G3V3G9 751 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 SNAP23O00161 211 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 RAB11FIP3O75154 756 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 RAD17O75943 681 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 KLRK1P26718 216 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 SCNN1DP51172 638 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 CXCL9Q07325 125 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 TFCP2Q12800 502 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 TXNRD3Q86VQ6 643 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 LPIN2Q92539 896 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 EXOC6BQ9Y2D4 811 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.57
SHROOM3-207ENST00000485780 EPS15P42566 896 aa11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 ATP2B3Q16720 1220 aa11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 USP50Q70EL3 339 aaPredicted RBP11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 RHPN1Q8TCX5 695 aa11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 GPR101Q96P66 508 aaPredicted RBP11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 ZC3H12CQ9C0D7 883 aaKnown RBP11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 DBNDD1Q9H9R9 158 aa11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 CREBZFQ9NS37 354 aa11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 ADARB2Q9NS39 739 aaKnown RBP11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 AKAP2Q9Y2D5 859 aa11.51□□□□□ -0.57
SHROOM3-207ENST00000485780 SLC5A1P13866 664 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 IL1R1P14778 569 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 KCNJ4P48050 445 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 MAP1SQ66K74 1059 aaPredicted RBP11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 SMC5Q8IY18 1101 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 CNTROBQ8N137 903 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 KIF1BPQ96EK5 621 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 COA1Q9GZY4 146 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 GPRC5DQ9NZD1 345 aa11.5□□□□□ -0.57
SHROOM3-207ENST00000485780 A0A1B0GUL7 405 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 YDJCA8MPS7 323 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 ECE2O60344 883 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 IFIT1P09914 478 aaKnown RBP11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 TNNI3KQ59H18 835 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 GCC1Q96CN9 775 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 FAM84BQ96KN1 310 aaPredicted RBP11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 FPGT-TNNI3KV9GXZ4 949 aa11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 COL1A1P02452 1464 aaPredicted RBP11.49□□□□□ -0.57
SHROOM3-207ENST00000485780 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms