RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-204ENST00000485373 PUM3Q15397 648 aaKnown RBP11.33□□□□□ -0.6
RTCB-204ENST00000485373 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
RTCB-204ENST00000485373 ATG9AQ7Z3C6 839 aa11.33□□□□□ -0.6
RTCB-204ENST00000485373 ZNF804AQ7Z570 1209 aa11.33□□□□□ -0.6
RTCB-204ENST00000485373 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
RTCB-204ENST00000485373 SSH3Q8TE77 659 aa11.33□□□□□ -0.6
RTCB-204ENST00000485373 SCN9AQ15858 1988 aa11.33□□□□□ -0.6
RTCB-204ENST00000485373 UTRNP46939 3433 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 CXCL9Q07325 125 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 TNIP1Q15025 636 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 ATP2B3Q16720 1220 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 TXNRD3Q86VQ6 643 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 VGLL2Q8N8G2 317 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 PSME4Q14997 1843 aa11.32□□□□□ -0.6
RTCB-204ENST00000485373 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 LMOD1P29536 600 aaPredicted RBP11.31□□□□□ -0.6
RTCB-204ENST00000485373 GYG1P46976 350 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
RTCB-204ENST00000485373 TFCP2Q12800 502 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 C15orf52Q6ZUT6 534 aaKnown RBP11.31□□□□□ -0.6
RTCB-204ENST00000485373 GPC2Q8N158 579 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 NMRK2Q9NPI5 230 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 EXOC6BQ9Y2D4 811 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 WDR90Q96KV7 1748 aa11.31□□□□□ -0.6
RTCB-204ENST00000485373 APBB1O00213 710 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 PSMD14O00487 310 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 HIBADHP31937 336 aaKnown RBP11.3□□□□□ -0.6
RTCB-204ENST00000485373 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 LPIN2Q92539 896 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 RRAGCQ9HB90 399 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 CD209Q9NNX6 404 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 AKAP2Q9Y2D5 859 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 SCN4AP35499 1836 aa11.3□□□□□ -0.6
RTCB-204ENST00000485373 ARAP2Q8WZ64 1704 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 ZNF609O15014 1411 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 IQCA1LA6NCM1 817 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 USP17L3A6NCW0 530 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 USP17L4A6NCW7 530 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
RTCB-204ENST00000485373 FGFR2P21802 821 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 GMPSP49915 693 aaPredicted RBP11.29□□□□□ -0.6
RTCB-204ENST00000485373 USP17L1Q7RTZ2 530 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 ERC1Q8IUD2 1116 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
RTCB-204ENST00000485373 EXOC6Q8TAG9 804 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 NEUROD6Q96NK8 337 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 NOP58Q9Y2X3 529 aaKnown RBP11.29□□□□□ -0.6
RTCB-204ENST00000485373 IRS2Q9Y4H2 1338 aa11.29□□□□□ -0.6
RTCB-204ENST00000485373 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
RTCB-204ENST00000485373 SASH1O94885 1247 aa11.28□□□□□ -0.6
RTCB-204ENST00000485373 VEGFAP15692 232 aaPredicted RBP11.28□□□□□ -0.6
RTCB-204ENST00000485373 GTF2IP78347 998 aa11.28□□□□□ -0.6
RTCB-204ENST00000485373 GORABQ5T7V8 394 aa11.28□□□□□ -0.6
RTCB-204ENST00000485373 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
RTCB-204ENST00000485373 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
RTCB-204ENST00000485373 FAM84BQ96KN1 310 aaPredicted RBP11.28□□□□□ -0.6
RTCB-204ENST00000485373 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
RTCB-204ENST00000485373 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
RTCB-204ENST00000485373 JAG2Q9Y219 1238 aa11.28□□□□□ -0.6
RTCB-204ENST00000485373 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
RTCB-204ENST00000485373 IL1R1P14778 569 aa11.27□□□□□ -0.61
RTCB-204ENST00000485373 ADORA1P30542 326 aa11.27□□□□□ -0.61
RTCB-204ENST00000485373 BCAMP50895 628 aa11.27□□□□□ -0.61
RTCB-204ENST00000485373 TIMM10P62072 90 aa11.27□□□□□ -0.61
RTCB-204ENST00000485373 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.61
RTCB-204ENST00000485373 STRIP1Q5VSL9 837 aa11.27□□□□□ -0.61
RTCB-204ENST00000485373 RSBN1LQ6PCB5 846 aaPredicted RBP11.27□□□□□ -0.61
RTCB-204ENST00000485373 FBXO33Q7Z6M2 555 aa11.27□□□□□ -0.61
RTCB-204ENST00000485373 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
RTCB-204ENST00000485373 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
RTCB-204ENST00000485373 H7C1D1 291 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 VIL1P09327 827 aaKnown RBP11.26□□□□□ -0.61
RTCB-204ENST00000485373 RPS12P25398 132 aaKnown RBP11.26□□□□□ -0.61
RTCB-204ENST00000485373 EPHX2P34913 555 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 EPS15P42566 896 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 SCNN1DP51172 638 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 AAMPQ13685 434 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 EAPPQ56P03 285 aaPredicted RBP11.26□□□□□ -0.61
RTCB-204ENST00000485373 TNNI3KQ59H18 835 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 TDRD7Q8NHU6 1098 aaKnown RBP11.26□□□□□ -0.61
RTCB-204ENST00000485373 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 XAGE2Q96GT9 111 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 GPRC5DQ9NZD1 345 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.26□□□□□ -0.61
RTCB-204ENST00000485373 FPGT-TNNI3KV9GXZ4 949 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 MYO3BQ8WXR4 1341 aa11.26□□□□□ -0.61
RTCB-204ENST00000485373 ZNF646O15015 1829 aaPredicted RBP11.25□□□□□ -0.61
RTCB-204ENST00000485373 KIF3CO14782 793 aa11.25□□□□□ -0.61
RTCB-204ENST00000485373 RAB11FIP3O75154 756 aa11.25□□□□□ -0.61
RTCB-204ENST00000485373 PHKA1P46020 1223 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms