RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 ERVV-1B6SEH8 477 aa13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 SASH1O94885 1247 aa13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 SNRPA1P09661 255 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 GPSM2P81274 684 aa13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 ZNF34Q8IZ26 560 aa13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 AGBL3Q8NEM8 1001 aa13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 CDX2Q99626 313 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 UBE2OQ9C0C9 1292 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-210ENST00000485122 COL2A1P02458 1487 aaPredicted RBP13.56□□□□□ -0.24
EXOSC1-210ENST00000485122 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
EXOSC1-210ENST00000485122 CTGFP29279 349 aa13.56□□□□□ -0.24
EXOSC1-210ENST00000485122 TJAP1Q5JTD0 557 aa13.56□□□□□ -0.24
EXOSC1-210ENST00000485122 DDX46Q7L014 1031 aaKnown RBP13.56□□□□□ -0.24
EXOSC1-210ENST00000485122 UNC93B1Q9H1C4 597 aa13.56□□□□□ -0.24
EXOSC1-210ENST00000485122 TESPA1A2RU30 521 aaPredicted RBP13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 WNT10BO00744 389 aa13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 GRK4P32298 578 aa13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 FAM109BQ6ICB4 259 aaPredicted RBP13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 MYLIPQ8WY64 445 aa13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 LAMA2P24043 3122 aaKnown RBP13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 CEMIPQ8WUJ3 1361 aa13.55□□□□□ -0.24
EXOSC1-210ENST00000485122 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 ZNF697Q5TEC3 545 aa13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 BRI3BPQ8WY22 251 aa13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 PAWRQ96IZ0 340 aaKnown RBP13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 ZFYVE28Q9HCC9 887 aa13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
EXOSC1-210ENST00000485122 SGPL1O95470 568 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 MAP3K11Q16584 847 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 CDCA8Q53HL2 280 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 ALYREFQ86V81 257 aaKnown RBP13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 FAM43AQ8N2R8 423 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 CELF1Q92879 486 aaKnown RBP13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 EYA3Q99504 573 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 MXD3Q9BW11 206 aa13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 BIN2Q9UBW5 565 aaPredicted RBP13.53□□□□□ -0.24
EXOSC1-210ENST00000485122 KIF22Q14807 665 aa13.52□□□□□ -0.25
EXOSC1-210ENST00000485122 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
EXOSC1-210ENST00000485122 MS4A4AQ96JQ5 239 aa13.52□□□□□ -0.25
EXOSC1-210ENST00000485122 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
EXOSC1-210ENST00000485122 G3V3G9 751 aa13.51□□□□□ -0.25
EXOSC1-210ENST00000485122 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
EXOSC1-210ENST00000485122 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
EXOSC1-210ENST00000485122 RAET1EQ8TD07 263 aa13.51□□□□□ -0.25
EXOSC1-210ENST00000485122 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
EXOSC1-210ENST00000485122 SRRDQ9UH36 339 aa13.51□□□□□ -0.25
EXOSC1-210ENST00000485122 MYL6BP14649 208 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 OSBPP22059 807 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 PRMT2P55345 433 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 OPTNQ96CV9 577 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 TRIM47Q96LD4 638 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 ELP3Q9H9T3 547 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-210ENST00000485122 CCL15-CCL14A0A0B4J2E2 113 aa13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 TFRCP02786 760 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 CCL15Q16663 113 aa13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 PARP10Q53GL7 1025 aa13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 APOBEC3FQ8IUX4 373 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 DEFB118Q96PH6 123 aa13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 ZC3H12CQ9C0D7 883 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-210ENST00000485122 MYPNQ86TC9 1320 aa13.48□□□□□ -0.25
EXOSC1-210ENST00000485122 TLR2O60603 784 aa13.48□□□□□ -0.25
EXOSC1-210ENST00000485122 UFL1O94874 794 aa13.48□□□□□ -0.25
EXOSC1-210ENST00000485122 FOSL2P15408 326 aa13.48□□□□□ -0.25
EXOSC1-210ENST00000485122 UBXN2AP68543 259 aa13.48□□□□□ -0.25
EXOSC1-210ENST00000485122 MORC1Q86VD1 984 aa13.48□□□□□ -0.25
EXOSC1-210ENST00000485122 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
EXOSC1-210ENST00000485122 MGAMO43451 1857 aa13.47□□□□□ -0.25
EXOSC1-210ENST00000485122 GNRH1P01148 92 aa13.47□□□□□ -0.25
EXOSC1-210ENST00000485122 PSMC4P43686 418 aa13.47□□□□□ -0.25
EXOSC1-210ENST00000485122 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
EXOSC1-210ENST00000485122 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
EXOSC1-210ENST00000485122 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 PPP1R12BO60237 982 aaPredicted RBP13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 NECAB2Q7Z6G3 386 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 DEFB129Q9H1M3 183 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 HCN4Q9Y3Q4 1203 aa13.46□□□□□ -0.25
EXOSC1-210ENST00000485122 CDH23Q9H251 3354 aa13.46□□□□□ -0.26
EXOSC1-210ENST00000485122 PRKCZQ05513 592 aa13.45□□□□□ -0.26
EXOSC1-210ENST00000485122 ADAMTS19Q8TE59 1207 aa13.45□□□□□ -0.26
EXOSC1-210ENST00000485122 TTYH1Q9H313 450 aaPredicted RBP13.45□□□□□ -0.26
EXOSC1-210ENST00000485122 SEMA6BQ9H3T3 888 aa13.45□□□□□ -0.26
EXOSC1-210ENST00000485122 CPA4Q9UI42 421 aa13.45□□□□□ -0.26
EXOSC1-210ENST00000485122 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
EXOSC1-210ENST00000485122 NBPF12Q5TAG4 269 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms