RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 GOLGA6L7A0A1B0GV03 622 aa18.24■□□□□ 0.51
PCDH17-202ENST00000484979 GSTTP1A0A1W2PQM5 241 aa18.24■□□□□ 0.51
PCDH17-202ENST00000484979 GRM1Q13255 1194 aa18.24■□□□□ 0.51
PCDH17-202ENST00000484979 RRP36Q96EU6 259 aaKnown RBP18.24■□□□□ 0.51
PCDH17-202ENST00000484979 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.24■□□□□ 0.51
PCDH17-202ENST00000484979 BICC1Q9H694 974 aaKnown RBP18.24■□□□□ 0.51
PCDH17-202ENST00000484979 PER1O15534 1290 aaPredicted RBP18.23■□□□□ 0.51
PCDH17-202ENST00000484979 HOOK3Q86VS8 718 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 SMC5Q8IY18 1101 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 HIBADHP31937 336 aaKnown RBP18.23■□□□□ 0.51
PCDH17-202ENST00000484979 DHX32Q7L7V1 743 aaKnown RBP18.23■□□□□ 0.51
PCDH17-202ENST00000484979 SPAG5Q96R06 1193 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 IL13P35225 146 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 STAT6P42226 847 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
PCDH17-202ENST00000484979 CTNNA2P26232 953 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 CCDC87Q9NVE4 849 aa18.23■□□□□ 0.51
PCDH17-202ENST00000484979 URI1O94763 535 aaPredicted RBP18.22■□□□□ 0.51
PCDH17-202ENST00000484979 UFL1O94874 794 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 KRT79Q5XKE5 535 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 TCHPQ9BT92 498 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 USP25Q9UHP3 1055 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
PCDH17-202ENST00000484979 C16orf71Q8IYS4 520 aaPredicted RBP18.22■□□□□ 0.51
PCDH17-202ENST00000484979 TMEM2Q9UHN6 1383 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 CCDC66A2RUB6 948 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 CHL1O00533 1208 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 PSMA7O14818 248 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 CERS3Q8IU89 383 aa18.22■□□□□ 0.51
PCDH17-202ENST00000484979 ITGA6P23229 1130 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 MRPS27Q92552 414 aaKnown RBP18.21■□□□□ 0.51
PCDH17-202ENST00000484979 A0A1B0GUL7 405 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 AKR1B10O60218 316 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 KIAA0754O94854 1291 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 TIMM10P62072 90 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 PUM3Q15397 648 aaKnown RBP18.21■□□□□ 0.51
PCDH17-202ENST00000484979 MAP9Q49MG5 647 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 GGA1Q9UJY5 639 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 MAST3O60307 1309 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 A1BGP04217 495 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 USP21Q9UK80 565 aa18.21■□□□□ 0.51
PCDH17-202ENST00000484979 SBNO2Q9Y2G9 1366 aa18.21■□□□□ 0.5
PCDH17-202ENST00000484979 CCDC171Q6TFL3 1326 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 KRT13P13646 458 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 TAF3Q5VWG9 929 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 WDR66Q8TBY9 1149 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 CTNNBL1Q8WYA6 563 aaPredicted RBP18.2■□□□□ 0.5
PCDH17-202ENST00000484979 ALS2CR12Q96Q35 445 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 GOLGA6L9A6NEM1 432 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 PLS1Q14651 629 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 KLHL40Q2TBA0 621 aa18.2■□□□□ 0.5
PCDH17-202ENST00000484979 GTPBP4Q9BZE4 634 aaKnown RBP18.2■□□□□ 0.5
PCDH17-202ENST00000484979 MCM3P25205 808 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 PDE6BP35913 854 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 BAG6P46379 1132 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 NCBP1Q09161 790 aaKnown RBP18.19■□□□□ 0.5
PCDH17-202ENST00000484979 CCDC102AQ96A19 550 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 PUF60Q9UHX1 559 aaKnown RBP18.19■□□□□ 0.5
PCDH17-202ENST00000484979 NOP2P46087 812 aaKnown RBP18.19■□□□□ 0.5
PCDH17-202ENST00000484979 H0YIN7 160 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 FAM193AP78312 1265 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 FERMT1Q9BQL6 677 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 TMCO5BA8MYB1 307 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 MBD4O95243 580 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 RLBP1P12271 317 aa18.19■□□□□ 0.5
PCDH17-202ENST00000484979 NAA15Q9BXJ9 866 aaKnown RBP18.19■□□□□ 0.5
PCDH17-202ENST00000484979 ASIC1P78348 528 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 RRAGBQ5VZM2 374 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 CREB3L3Q68CJ9 461 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 TMC6Q7Z403 805 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 PDCL2Q8N4E4 241 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 HS2ST1Q7LGA3 356 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 ZNF496Q96IT1 587 aaPredicted RBP18.18■□□□□ 0.5
PCDH17-202ENST00000484979 PLVAPQ9BX97 442 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 IMPG2Q9BZV3 1241 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 PHACTR2O75167 634 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 AFMP43652 599 aa18.18■□□□□ 0.5
PCDH17-202ENST00000484979 TMCO3Q6UWJ1 677 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 G2E3Q7L622 706 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 ACTN2P35609 894 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 DNA2P51530 1060 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 ISM2Q6H9L7 571 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 HOOK2Q96ED9 719 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 CTAGE1Q96RT6 745 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 SPTLC2O15270 562 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 DPP8Q6V1X1 898 aaPredicted RBP18.17■□□□□ 0.5
PCDH17-202ENST00000484979 LARGE2Q8N3Y3 721 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms