RNA–Protein interactions for RNA: ENST00000484922.1

SHROOM4-205, Transcript of shroom family member 4, humanhuman

TSL 5

Gene SHROOM4, Length 295 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-205ENST00000484922 RIC3Q7Z5B4 369 aa3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 PLBD2Q8NHP8 589 aa3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 TSR2Q969E8 191 aaKnown RBP3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 TMX4Q9H1E5 349 aaPredicted RBP3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 TBC1D2BQ9UPU7 963 aa3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 HDAC5Q9UQL6 1122 aa3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 NIP7Q9Y221 180 aaKnown RBP eCLIP3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 SLC27A5Q9Y2P5 690 aa3.31□□□□□ -1.88
SHROOM4-205ENST00000484922 ARFGEF1Q9Y6D6 1849 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 N4BP2Q86UW6 1770 aaPredicted RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 DLEC1Q9Y238 1755 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 IBTKQ9P2D0 1353 aaPredicted RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 PTPRCP08575 1304 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 KIF16BQ96L93 1317 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 TTC24A2A3L6 582 aaPredicted RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 PRAMEF22A3QJZ6 481 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 DDX11L8A8MPP1 907 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 H0YIN7 160 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 IPO8O15397 1037 aaKnown RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 GRIN3BO60391 1043 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 CAMTA2O94983 1202 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 SERPINB2P05120 415 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 MS4A1P11836 297 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 TM4SF1P30408 202 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 ALDH1B1P30837 517 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 SLFN5Q08AF3 891 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 AIMP1Q12904 312 aaKnown RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 FKBP5Q13451 457 aaPredicted RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 TCIRG1Q13488 830 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 RBM26Q5T8P6 1007 aaKnown RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 MSL1Q68DK7 614 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 BICDL1Q6ZP65 573 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 METTL3Q86U44 580 aaKnown RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 NBPF5PQ86XG9 351 aaPredicted RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 CRIPAKQ8N1N5 446 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 CNBD1Q8NA66 436 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 C8orf58Q8NAV2 365 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 SYT17Q9BSW7 474 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 FHDC1Q9C0D6 1143 aaPredicted RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 ZBTB3Q9H5J0 574 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 PRDM9Q9NQV7 894 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 CHPF2Q9P2E5 772 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 SRP68Q9UHB9 627 aaKnown RBP3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 LAMB2P55268 1798 aa3.3□□□□□ -1.88
SHROOM4-205ENST00000484922 ATP10DQ9P241 1426 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 BRCA1P38398 1863 aaKnown RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 CCDC88AQ3V6T2 1871 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 ZNF521Q96K83 1311 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 SENP3-EIF4A1A0A087X0R7 540 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 J3QL48 77 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 POLRMTO00411 1230 aaKnown RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 VAMP4O75379 141 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 SMPD1P17405 629 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 PIP4K2AP48426 406 aaPredicted RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 FLIIQ13045 1269 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 NFIXQ14938 502 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 GPR162Q16538 588 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 KRT24Q2M2I5 525 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 GRIPAP1Q4V328 841 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 SOGA3Q5TF21 947 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 TBC1D9BQ66K14 1250 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 NBPF10Q6P3W6 841 aaKnown RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 BRICD5Q6PL45 260 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 KSR2Q6VAB6 950 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 TTLL7Q6ZT98 887 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 NBPF15Q8N660 670 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 TSPYL6Q8N831 410 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 RDH13Q8NBN7 331 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 CCDC191Q8NCU4 936 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 XAGE3Q8WTP9 111 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 DNAAF4Q8WXU2 420 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 RPGRQ92834 1020 aaKnown RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 CNKSR1Q969H4 720 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 NLRP3Q96P20 1036 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 PHOX2BQ99453 314 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 METTL22Q9BUU2 404 aaPredicted RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 UTP14AQ9BVJ6 771 aaKnown RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 BRIP1Q9BX63 1249 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 PDGFDQ9GZP0 370 aaPredicted RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 CHMP4BQ9H444 224 aaKnown RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 SMC4Q9NTJ3 1288 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 CWC25Q9NXE8 425 aaPredicted RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 PIM2Q9P1W9 311 aa3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 DAXXQ9UER7 740 aaPredicted RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 TRMT112Q9UI30 125 aaKnown RBP3.29□□□□□ -1.88
SHROOM4-205ENST00000484922 ANKRD31Q8N7Z5 1873 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 RIC1Q4ADV7 1423 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 SH3TC1Q8TE82 1336 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 PI4KAP2A4QPH2 592 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 FAM177BA6PVY3 158 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 FMNL1O95466 1100 aaPredicted RBP3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 ANXA1P04083 346 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 NPR1P16066 1061 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 GPTP24298 496 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 GCGRP47871 477 aa3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 SMCPP49901 116 aaPredicted RBP3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 BRPF1P55201 1214 aaPredicted RBP3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 TRIM28Q13263 835 aaKnown RBP3.28□□□□□ -1.88
SHROOM4-205ENST00000484922 HLFQ16534 295 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms