RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 CTNNA3Q9UI47 895 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 KAT6BQ8WYB5 2073 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 SPATA31A1Q5TZJ5 1347 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 LRP5O75197 1615 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 LAMB2P55268 1798 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 PDE8AO60658 829 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 CYP21A2P08686 494 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 CTSWP56202 376 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 ST3GAL1Q11201 340 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 GORABQ5T7V8 394 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 LARP1BQ659C4 914 aaKnown RBP8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 ZSCAN25Q6NSZ9 544 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 DHX32Q7L7V1 743 aaKnown RBP8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 ZNF34Q8IZ26 560 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 TTLL11Q8NHH1 800 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 GTF3C6Q969F1 213 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 FAM89AQ96GI7 184 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 SLC4A9Q96Q91 983 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 PUS3Q9BZE2 481 aaKnown RBP8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 TMEM63CQ9P1W3 806 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 AKAP11Q9UKA4 1901 aa8.76□□□□□ -1.01
SHROOM3-206ENST00000484236 RIC1Q4ADV7 1423 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 IRS4O14654 1257 aaPredicted RBP8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 RGL2O15211 777 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 EIF5P55010 431 aaKnown RBP8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 TTF1Q15361 905 aaPredicted RBP8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 DDB1Q16531 1140 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 ATP2B3Q16720 1220 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 HS1BP3Q53T59 392 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 CCDC183Q5T5S1 534 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 BARGINQ6ZT62 677 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 FAM184AQ8NB25 1140 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 TRIM44Q96DX7 344 aaPredicted RBP8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 ARXQ96QS3 562 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 AGXT2Q9BYV1 514 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 ZBTB1Q9Y2K1 713 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 ZNF330Q9Y3S2 320 aaPredicted RBP8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 KIF3AQ9Y496 699 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 MAST3O60307 1309 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 ELP1O95163 1332 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 MROH5Q6ZUA9 1318 aa8.75□□□□□ -1.01
SHROOM3-206ENST00000484236 RTL9Q8NET4 1388 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 SYCE3A1L190 88 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 PFKFB2O60825 505 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 UQCRFS1P1P0C7P4 283 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 HSPD1P10809 573 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 ITGA6P23229 1130 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 KRT85P78386 507 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 HMGN5P82970 282 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 EXOSC10Q01780 885 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 HLFQ16534 295 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 UVSSAQ2YD98 709 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 PARP10Q53GL7 1025 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 METTL24Q5JXM2 366 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 LDHAL6AQ6ZMR3 332 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 CCDC129Q6ZRS4 1044 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 Q6ZUG5 572 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 DZIP3Q86Y13 1208 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 NECAB1Q8N987 351 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 RGS22Q8NE09 1264 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 APPBP2Q92624 585 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 SMARCC1Q92922 1105 aaPredicted RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 SEC62Q99442 399 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 SCAND2PQ9GZW5 306 aaPredicted RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 TSPY26PQ9H489 355 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 CCDC87Q9NVE4 849 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 RBM27Q9P2N5 1060 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 TRMT112Q9UI30 125 aaKnown RBP8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 CNPY2Q9Y2B0 182 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 SPATA31A5Q5VU36 1347 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 SPATA31A7Q8IWB4 1347 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 WDR19Q8NEZ3 1342 aa8.74□□□□□ -1.01
SHROOM3-206ENST00000484236 ATRNO75882 1429 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 VPS37CA5D8V6 355 aaPredicted RBP8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 ATN1P54259 1190 aaPredicted RBP8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 EVCP57679 992 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 FGD1P98174 961 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 FKBP4Q02790 459 aaKnown RBP eCLIP8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 VGLL2Q8N8G2 317 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 SMARCC2Q8TAQ2 1214 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 SYTL4Q96C24 671 aaPredicted RBP8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 ZNF274Q96GC6 653 aaPredicted RBP8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 GREM2Q9H772 168 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 CNNM1Q9NRU3 951 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 NSFL1CQ9UNZ2 370 aaKnown RBP8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 TAF6LQ9Y6J9 622 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 NDUFB9Q9Y6M9 179 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 MYH15Q9Y2K3 1946 aa8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 COL5A3P25940 1745 aaPredicted RBP8.73□□□□□ -1.01
SHROOM3-206ENST00000484236 DDX60Q8IY21 1712 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms