RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
SGIP1-210ENST00000483060 WDR64B1ANS9 1081 aa8.67□□□□□ -1.02
SGIP1-210ENST00000483060 UBAP1LF5GYI3 381 aa8.67□□□□□ -1.02
SGIP1-210ENST00000483060 CENPBP07199 599 aaPredicted RBP8.67□□□□□ -1.02
SGIP1-210ENST00000483060 BRD2P25440 801 aaKnown RBP8.67□□□□□ -1.02
SGIP1-210ENST00000483060 CDC25BP30305 580 aa8.67□□□□□ -1.02
SGIP1-210ENST00000483060 COL13A1Q5TAT6 717 aaPredicted RBP8.67□□□□□ -1.02
SGIP1-210ENST00000483060 ABI1Q8IZP0 508 aa8.67□□□□□ -1.02
SGIP1-210ENST00000483060 FOXD4L4Q8WXT5 416 aaPredicted RBP8.67□□□□□ -1.02
SGIP1-210ENST00000483060 SEC31BQ9NQW1 1179 aa8.67□□□□□ -1.02
SGIP1-210ENST00000483060 PIM2Q9P1W9 311 aa8.67□□□□□ -1.02
SGIP1-210ENST00000483060 ANGEL1Q9UNK9 670 aaKnown RBP8.67□□□□□ -1.02
SGIP1-210ENST00000483060 SCNN1AP37088 669 aa8.66□□□□□ -1.02
SGIP1-210ENST00000483060 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
SGIP1-210ENST00000483060 UBASH3BQ8TF42 649 aa8.66□□□□□ -1.02
SGIP1-210ENST00000483060 PIK3R5Q8WYR1 880 aa8.66□□□□□ -1.02
SGIP1-210ENST00000483060 RNF208Q9H0X6 261 aa8.66□□□□□ -1.02
SGIP1-210ENST00000483060 RASSF4Q9H2L5 321 aa8.66□□□□□ -1.02
SGIP1-210ENST00000483060 DDX3YO15523 660 aaKnown RBP8.65□□□□□ -1.02
SGIP1-210ENST00000483060 ADAM11O75078 769 aa8.65□□□□□ -1.02
SGIP1-210ENST00000483060 PTPRAP18433 802 aa8.65□□□□□ -1.02
SGIP1-210ENST00000483060 PREPP48147 710 aa8.65□□□□□ -1.02
SGIP1-210ENST00000483060 TTC39BQ5VTQ0 682 aaPredicted RBP8.65□□□□□ -1.02
SGIP1-210ENST00000483060 OGFOD2Q6N063 350 aa8.65□□□□□ -1.02
SGIP1-210ENST00000483060 WNT8BQ93098 351 aa8.65□□□□□ -1.02
SGIP1-210ENST00000483060 KLHDC7BQ96G42 594 aa8.65□□□□□ -1.02
SGIP1-210ENST00000483060 FNDC3AQ9Y2H6 1198 aaKnown RBP8.65□□□□□ -1.02
SGIP1-210ENST00000483060 KIF4AO95239 1232 aa8.64□□□□□ -1.03
SGIP1-210ENST00000483060 EPHA1P21709 976 aa8.64□□□□□ -1.03
SGIP1-210ENST00000483060 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
SGIP1-210ENST00000483060 FAM200AQ8TCP9 573 aa8.64□□□□□ -1.03
SGIP1-210ENST00000483060 ASIC4Q96FT7 647 aa8.64□□□□□ -1.03
SGIP1-210ENST00000483060 PBX4Q9BYU1 374 aa8.64□□□□□ -1.03
SGIP1-210ENST00000483060 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
SGIP1-210ENST00000483060 LMOD1P29536 600 aaPredicted RBP8.63□□□□□ -1.03
SGIP1-210ENST00000483060 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
SGIP1-210ENST00000483060 CPSF6Q16630 551 aaKnown RBP eCLIP8.63□□□□□ -1.03
SGIP1-210ENST00000483060 FDX2Q6P4F2 183 aa8.63□□□□□ -1.03
SGIP1-210ENST00000483060 MFSD14AQ96MC6 490 aa8.63□□□□□ -1.03
SGIP1-210ENST00000483060 ADAM19Q9H013 955 aa8.63□□□□□ -1.03
SGIP1-210ENST00000483060 OSGEPQ9NPF4 335 aa8.63□□□□□ -1.03
SGIP1-210ENST00000483060 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
SGIP1-210ENST00000483060 LEMD3Q9Y2U8 911 aa8.63□□□□□ -1.03
SGIP1-210ENST00000483060 A6NJR5 290 aa8.62□□□□□ -1.03
SGIP1-210ENST00000483060 CABP4P57796 275 aa8.62□□□□□ -1.03
SGIP1-210ENST00000483060 PIP4K2BP78356 416 aa8.62□□□□□ -1.03
SGIP1-210ENST00000483060 POU5F2Q8N7G0 328 aa8.62□□□□□ -1.03
SGIP1-210ENST00000483060 CALR3Q96L12 384 aaKnown RBP8.62□□□□□ -1.03
SGIP1-210ENST00000483060 KRTAP4-9Q9BYQ8 210 aa8.62□□□□□ -1.03
SGIP1-210ENST00000483060 H3BRJ5 948 aa8.61□□□□□ -1.03
SGIP1-210ENST00000483060 GAS2O43903 313 aaKnown RBP8.61□□□□□ -1.03
SGIP1-210ENST00000483060 C16orf46Q6P387 395 aa8.61□□□□□ -1.03
SGIP1-210ENST00000483060 ADAMTSL4Q6UY14 1074 aa8.61□□□□□ -1.03
SGIP1-210ENST00000483060 PROSER2Q86WR7 435 aaPredicted RBP8.61□□□□□ -1.03
SGIP1-210ENST00000483060 FNBP4Q8N3X1 1017 aaPredicted RBP8.61□□□□□ -1.03
SGIP1-210ENST00000483060 FBXL18Q96ME1 805 aa8.61□□□□□ -1.03
SGIP1-210ENST00000483060 RUSC1Q9BVN2 902 aa8.61□□□□□ -1.03
SGIP1-210ENST00000483060 ACIN1Q9UKV3 1341 aaKnown RBP8.6□□□□□ -1.03
SGIP1-210ENST00000483060 FOSL1P15407 271 aa8.6□□□□□ -1.03
SGIP1-210ENST00000483060 MAP4P27816 1152 aaKnown RBP8.6□□□□□ -1.03
SGIP1-210ENST00000483060 MSMPQ1L6U9 139 aa8.6□□□□□ -1.03
SGIP1-210ENST00000483060 CBLL1Q75N03 491 aa8.6□□□□□ -1.03
SGIP1-210ENST00000483060 NCAPG2Q86XI2 1143 aa8.6□□□□□ -1.03
SGIP1-210ENST00000483060 CEP120Q8N960 986 aa8.6□□□□□ -1.03
SGIP1-210ENST00000483060 ABI2Q9NYB9 513 aaPredicted RBP8.6□□□□□ -1.03
SGIP1-210ENST00000483060 CCDC39Q9UFE4 941 aa8.6□□□□□ -1.03
SGIP1-210ENST00000483060 MEGF11A6BM72 1044 aa8.59□□□□□ -1.03
SGIP1-210ENST00000483060 PRNPP04156 253 aa8.59□□□□□ -1.03
SGIP1-210ENST00000483060 C8AP07357 584 aa8.59□□□□□ -1.03
SGIP1-210ENST00000483060 VSIG10LQ86VR7 867 aa8.59□□□□□ -1.03
SGIP1-210ENST00000483060 POP1Q99575 1024 aaKnown RBP8.59□□□□□ -1.03
SGIP1-210ENST00000483060 OSBPL1AQ9BXW6 950 aa8.59□□□□□ -1.03
SGIP1-210ENST00000483060 JUNBP17275 347 aaPredicted RBP8.58□□□□□ -1.04
SGIP1-210ENST00000483060 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
SGIP1-210ENST00000483060 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
SGIP1-210ENST00000483060 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
SGIP1-210ENST00000483060 F13BP05160 661 aa8.57□□□□□ -1.04
SGIP1-210ENST00000483060 NLRP12P59046 1061 aa8.57□□□□□ -1.04
SGIP1-210ENST00000483060 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
SGIP1-210ENST00000483060 C14orf37Q86TY3 774 aa8.57□□□□□ -1.04
SGIP1-210ENST00000483060 FBXL6Q8N531 539 aa8.57□□□□□ -1.04
SGIP1-210ENST00000483060 METTL22Q9BUU2 404 aaPredicted RBP8.57□□□□□ -1.04
SGIP1-210ENST00000483060 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
SGIP1-210ENST00000483060 RXRBP28702 533 aa8.56□□□□□ -1.04
SGIP1-210ENST00000483060 ARL4DP49703 201 aa8.56□□□□□ -1.04
SGIP1-210ENST00000483060 TP53INP2Q8IXH6 220 aa8.56□□□□□ -1.04
SGIP1-210ENST00000483060 CLUAP1Q96AJ1 413 aa8.56□□□□□ -1.04
SGIP1-210ENST00000483060 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
SGIP1-210ENST00000483060 CLSPNQ9HAW4 1339 aa8.55□□□□□ -1.04
SGIP1-210ENST00000483060 CYP2E1P05181 493 aaPredicted RBP8.55□□□□□ -1.04
SGIP1-210ENST00000483060 ITGB5P18084 799 aa8.55□□□□□ -1.04
SGIP1-210ENST00000483060 ZAP70P43403 619 aa8.55□□□□□ -1.04
SGIP1-210ENST00000483060 SGO2Q562F6 1265 aa8.55□□□□□ -1.04
SGIP1-210ENST00000483060 TNFRSF10BO14763 440 aa8.54□□□□□ -1.04
SGIP1-210ENST00000483060 FAM26DQ5JW98 314 aa8.54□□□□□ -1.04
SGIP1-210ENST00000483060 NUTM2GQ5VZR2 741 aa8.53□□□□□ -1.04
SGIP1-210ENST00000483060 PDE12Q6L8Q7 609 aaKnown RBP8.53□□□□□ -1.04
SGIP1-210ENST00000483060 PAOXQ6QHF9 649 aa8.53□□□□□ -1.04
SGIP1-210ENST00000483060 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
SGIP1-210ENST00000483060 AGBL5Q8NDL9 886 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms