RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 GOLIM4O00461 696 aa21.16■□□□□ 0.98
SSR4-209ENST00000482902 SCRN1Q12765 414 aa21.16■□□□□ 0.98
SSR4-209ENST00000482902 NBPF14Q5TI25 921 aa21.16■□□□□ 0.98
SSR4-209ENST00000482902 NBPF10Q6P3W6 841 aaKnown RBP21.16■□□□□ 0.98
SSR4-209ENST00000482902 NBPF15Q8N660 670 aa21.16■□□□□ 0.98
SSR4-209ENST00000482902 COL18A1P39060 1754 aa21.16■□□□□ 0.98
SSR4-209ENST00000482902 ARFGEF2Q9Y6D5 1785 aa21.16■□□□□ 0.98
SSR4-209ENST00000482902 SLFNL1Q499Z3 407 aa21.15■□□□□ 0.98
SSR4-209ENST00000482902 ATG9AQ7Z3C6 839 aa21.15■□□□□ 0.98
SSR4-209ENST00000482902 BICD2Q8TD16 824 aa21.15■□□□□ 0.98
SSR4-209ENST00000482902 PGBD1Q96JS3 809 aa21.15■□□□□ 0.98
SSR4-209ENST00000482902 CLSTN2Q9H4D0 955 aa21.15■□□□□ 0.98
SSR4-209ENST00000482902 CLIP2Q9UDT6 1046 aa21.15■□□□□ 0.98
SSR4-209ENST00000482902 PAG1Q9NWQ8 432 aa21.15■□□□□ 0.98
SSR4-209ENST00000482902 ZNF215Q9UL58 517 aaPredicted RBP21.15■□□□□ 0.98
SSR4-209ENST00000482902 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
SSR4-209ENST00000482902 CCDC66A2RUB6 948 aa21.14■□□□□ 0.97
SSR4-209ENST00000482902 CDC25BP30305 580 aa21.14■□□□□ 0.97
SSR4-209ENST00000482902 ZNF592Q92610 1267 aa21.14■□□□□ 0.97
SSR4-209ENST00000482902 NR1I2O75469 434 aa21.14■□□□□ 0.97
SSR4-209ENST00000482902 HMGB1P09429 215 aaKnown RBP21.14■□□□□ 0.97
SSR4-209ENST00000482902 TIMM10P62072 90 aa21.14■□□□□ 0.97
SSR4-209ENST00000482902 TTLL7Q6ZT98 887 aa21.14■□□□□ 0.97
SSR4-209ENST00000482902 ZSCAN16Q9H4T2 348 aaPredicted RBP21.14■□□□□ 0.97
SSR4-209ENST00000482902 HELLSQ9NRZ9 838 aa21.14■□□□□ 0.97
SSR4-209ENST00000482902 CWC25Q9NXE8 425 aaPredicted RBP21.14■□□□□ 0.97
SSR4-209ENST00000482902 PALLDQ8WX93 1383 aa21.13■□□□□ 0.97
SSR4-209ENST00000482902 USP27XA6NNY8 438 aa21.13■□□□□ 0.97
SSR4-209ENST00000482902 NYAP1Q6ZVC0 841 aa21.13■□□□□ 0.97
SSR4-209ENST00000482902 DHX32Q7L7V1 743 aaKnown RBP21.13■□□□□ 0.97
SSR4-209ENST00000482902 SMARCC2Q8TAQ2 1214 aa21.13■□□□□ 0.97
SSR4-209ENST00000482902 PFKFB2O60825 505 aa21.13■□□□□ 0.97
SSR4-209ENST00000482902 IRX5P78411 483 aaPredicted RBP21.13■□□□□ 0.97
SSR4-209ENST00000482902 ZNF165P49910 485 aa21.12■□□□□ 0.97
SSR4-209ENST00000482902 FBXO38Q6PIJ6 1188 aa21.12■□□□□ 0.97
SSR4-209ENST00000482902 LLPHQ9BRT6 129 aaKnown RBP21.12■□□□□ 0.97
SSR4-209ENST00000482902 BCL11BQ9C0K0 894 aaPredicted RBP21.12■□□□□ 0.97
SSR4-209ENST00000482902 GPR108Q9NPR9 543 aa21.12■□□□□ 0.97
SSR4-209ENST00000482902 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
SSR4-209ENST00000482902 IL15P40933 162 aaPredicted RBP21.12■□□□□ 0.97
SSR4-209ENST00000482902 RBM6P78332 1123 aaKnown RBP21.12■□□□□ 0.97
SSR4-209ENST00000482902 DSCC1Q9BVC3 393 aa21.12■□□□□ 0.97
SSR4-209ENST00000482902 DNAJC25Q9H1X3 360 aa21.12■□□□□ 0.97
SSR4-209ENST00000482902 CFAP45Q9UL16 551 aa21.12■□□□□ 0.97
SSR4-209ENST00000482902 LRRC8AQ8IWT6 810 aa21.11■□□□□ 0.97
SSR4-209ENST00000482902 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.11■□□□□ 0.97
SSR4-209ENST00000482902 V9GYY5 206 aaPredicted RBP21.11■□□□□ 0.97
SSR4-209ENST00000482902 GLI3P10071 1580 aa21.11■□□□□ 0.97
SSR4-209ENST00000482902 PKD1L3Q7Z443 1732 aa21.11■□□□□ 0.97
SSR4-209ENST00000482902 APOBRQ0VD83 1088 aa21.1■□□□□ 0.97
SSR4-209ENST00000482902 ZMYM1Q5SVZ6 1142 aa21.1■□□□□ 0.97
SSR4-209ENST00000482902 NSUN7Q8NE18 718 aaKnown RBP21.1■□□□□ 0.97
SSR4-209ENST00000482902 TNS3Q68CZ2 1445 aa21.1■□□□□ 0.97
SSR4-209ENST00000482902 FOSBP53539 338 aa21.1■□□□□ 0.97
SSR4-209ENST00000482902 LRRC24Q50LG9 513 aa21.1■□□□□ 0.97
SSR4-209ENST00000482902 A1BGP04217 495 aa21.09■□□□□ 0.97
SSR4-209ENST00000482902 ARID5BQ14865 1188 aa21.09■□□□□ 0.97
SSR4-209ENST00000482902 ZNF594Q96JF6 807 aaPredicted RBP21.09■□□□□ 0.97
SSR4-209ENST00000482902 EYA2O00167 538 aa21.09■□□□□ 0.97
SSR4-209ENST00000482902 HSPD1P10809 573 aaKnown RBP21.09■□□□□ 0.97
SSR4-209ENST00000482902 CEBPZQ03701 1054 aaKnown RBP21.09■□□□□ 0.97
SSR4-209ENST00000482902 ELF2Q15723 593 aa21.09■□□□□ 0.97
SSR4-209ENST00000482902 ERO1AQ96HE7 468 aa21.09■□□□□ 0.97
SSR4-209ENST00000482902 TIGD1Q96MW7 591 aa21.09■□□□□ 0.97
SSR4-209ENST00000482902 ZBTB3Q9H5J0 574 aa21.09■□□□□ 0.97
SSR4-209ENST00000482902 A0A0G2JLW4 131 aa21.08■□□□□ 0.97
SSR4-209ENST00000482902 PTPDC1A2A3K4 754 aa21.08■□□□□ 0.97
SSR4-209ENST00000482902 CTDNEP1O95476 244 aa21.08■□□□□ 0.97
SSR4-209ENST00000482902 IFIT1P09914 478 aaKnown RBP21.08■□□□□ 0.97
SSR4-209ENST00000482902 EXOSC10Q01780 885 aaKnown RBP21.08■□□□□ 0.97
SSR4-209ENST00000482902 PTPN14Q15678 1187 aa21.08■□□□□ 0.97
SSR4-209ENST00000482902 ST7Q9NRC1 585 aa21.08■□□□□ 0.97
SSR4-209ENST00000482902 E7EWF7 191 aa21.08■□□□□ 0.96
SSR4-209ENST00000482902 CCT2P78371 535 aaKnown RBP21.08■□□□□ 0.96
SSR4-209ENST00000482902 NAA16Q6N069 864 aaPredicted RBP21.08■□□□□ 0.96
SSR4-209ENST00000482902 SARM1Q6SZW1 724 aa21.08■□□□□ 0.96
SSR4-209ENST00000482902 LAMB4A4D0S4 1761 aa21.08■□□□□ 0.96
SSR4-209ENST00000482902 ZNF446Q9NWS9 450 aa21.07■□□□□ 0.96
SSR4-209ENST00000482902 MAST3O60307 1309 aa21.07■□□□□ 0.96
SSR4-209ENST00000482902 A0A1B0GUL7 405 aa21.07■□□□□ 0.96
SSR4-209ENST00000482902 RNF113AO15541 343 aaKnown RBP21.07■□□□□ 0.96
SSR4-209ENST00000482902 NEMFO60524 1076 aa21.07■□□□□ 0.96
SSR4-209ENST00000482902 ADD1P35611 737 aaKnown RBP21.07■□□□□ 0.96
SSR4-209ENST00000482902 TICAM2Q86XR7 235 aa21.07■□□□□ 0.96
SSR4-209ENST00000482902 CCDC191Q8NCU4 936 aa21.07■□□□□ 0.96
SSR4-209ENST00000482902 AGXT2Q9BYV1 514 aa21.07■□□□□ 0.96
SSR4-209ENST00000482902 NAP1L2Q9ULW6 460 aaPredicted RBP21.07■□□□□ 0.96
SSR4-209ENST00000482902 PDE4CQ08493 712 aa21.06■□□□□ 0.96
SSR4-209ENST00000482902 IQCB1Q15051 598 aa21.06■□□□□ 0.96
SSR4-209ENST00000482902 SPATA31A3Q5VYP0 1347 aa21.06■□□□□ 0.96
SSR4-209ENST00000482902 VGLL3A8MV65 326 aa21.06■□□□□ 0.96
SSR4-209ENST00000482902 FAM193AP78312 1265 aa21.06■□□□□ 0.96
SSR4-209ENST00000482902 ZCRB1Q8TBF4 217 aaKnown RBP21.06■□□□□ 0.96
SSR4-209ENST00000482902 MRFAP1L1Q96HT8 127 aa21.06■□□□□ 0.96
SSR4-209ENST00000482902 NCOA5Q9HCD5 579 aaKnown RBP21.06■□□□□ 0.96
SSR4-209ENST00000482902 CPDO75976 1380 aa21.06■□□□□ 0.96
SSR4-209ENST00000482902 PUS3Q9BZE2 481 aaKnown RBP21.05■□□□□ 0.96
SSR4-209ENST00000482902 FTOQ9C0B1 505 aaKnown RBP eCLIP21.05■□□□□ 0.96
SSR4-209ENST00000482902 PCDH11XQ9BZA7 1347 aa21.05■□□□□ 0.96
SSR4-209ENST00000482902 PCDH11YQ9BZA8 1340 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms