RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 GGA1Q9UJY5 639 aa13.35□□□□□ -0.27
DDX39B-220ENST00000482195 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
DDX39B-220ENST00000482195 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-220ENST00000482195 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
DDX39B-220ENST00000482195 CCDC102AQ96A19 550 aa13.34□□□□□ -0.27
DDX39B-220ENST00000482195 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
DDX39B-220ENST00000482195 PAPPA2Q9BXP8 1791 aa13.34□□□□□ -0.27
DDX39B-220ENST00000482195 ASTN2O75129 1339 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-220ENST00000482195 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.28
DDX39B-220ENST00000482195 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
DDX39B-220ENST00000482195 TRPA1O75762 1119 aa13.33□□□□□ -0.28
DDX39B-220ENST00000482195 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
DDX39B-220ENST00000482195 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
DDX39B-220ENST00000482195 JARID2Q92833 1246 aaPredicted RBP13.33□□□□□ -0.28
DDX39B-220ENST00000482195 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
DDX39B-220ENST00000482195 CDCA5Q96FF9 252 aa13.33□□□□□ -0.28
DDX39B-220ENST00000482195 PHAXQ9H814 394 aaKnown RBP13.33□□□□□ -0.28
DDX39B-220ENST00000482195 SLC34A2O95436 690 aa13.32□□□□□ -0.28
DDX39B-220ENST00000482195 SLC10A3P09131 477 aa13.32□□□□□ -0.28
DDX39B-220ENST00000482195 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
DDX39B-220ENST00000482195 RGS19P49795 217 aa13.32□□□□□ -0.28
DDX39B-220ENST00000482195 ANGEL2Q5VTE6 544 aaKnown RBP13.32□□□□□ -0.28
DDX39B-220ENST00000482195 SAGE1Q9NXZ1 904 aa13.32□□□□□ -0.28
DDX39B-220ENST00000482195 ADAMTS8Q9UP79 889 aa13.32□□□□□ -0.28
DDX39B-220ENST00000482195 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
DDX39B-220ENST00000482195 SOX10P56693 466 aa13.31□□□□□ -0.28
DDX39B-220ENST00000482195 TRIM28Q13263 835 aaKnown RBP13.31□□□□□ -0.28
DDX39B-220ENST00000482195 SCARF1Q14162 830 aa13.31□□□□□ -0.28
DDX39B-220ENST00000482195 RSBN1LQ6PCB5 846 aaPredicted RBP13.31□□□□□ -0.28
DDX39B-220ENST00000482195 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
DDX39B-220ENST00000482195 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
DDX39B-220ENST00000482195 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
DDX39B-220ENST00000482195 PODXL2Q9NZ53 605 aa13.31□□□□□ -0.28
DDX39B-220ENST00000482195 XDHP47989 1333 aa13.31□□□□□ -0.28
DDX39B-220ENST00000482195 PDE8AO60658 829 aa13.3□□□□□ -0.28
DDX39B-220ENST00000482195 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
DDX39B-220ENST00000482195 RASAL3Q86YV0 1011 aa13.3□□□□□ -0.28
DDX39B-220ENST00000482195 AGBL3Q8NEM8 1001 aa13.3□□□□□ -0.28
DDX39B-220ENST00000482195 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
DDX39B-220ENST00000482195 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
DDX39B-220ENST00000482195 GNAI1P63096 354 aa13.29□□□□□ -0.28
DDX39B-220ENST00000482195 PDAP1Q13442 181 aaKnown RBP13.29□□□□□ -0.28
DDX39B-220ENST00000482195 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
DDX39B-220ENST00000482195 CCDC191Q8NCU4 936 aa13.29□□□□□ -0.28
DDX39B-220ENST00000482195 MYOZ2Q9NPC6 264 aa13.29□□□□□ -0.28
DDX39B-220ENST00000482195 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
DDX39B-220ENST00000482195 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
DDX39B-220ENST00000482195 SCAF8Q9UPN6 1271 aaKnown RBP13.29□□□□□ -0.28
DDX39B-220ENST00000482195 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
DDX39B-220ENST00000482195 USP17L3A6NCW0 530 aa13.28□□□□□ -0.28
DDX39B-220ENST00000482195 USP17L4A6NCW7 530 aa13.28□□□□□ -0.28
DDX39B-220ENST00000482195 USP17L8P0C7I0 530 aa13.28□□□□□ -0.28
DDX39B-220ENST00000482195 ATP2B4P23634 1241 aa13.28□□□□□ -0.28
DDX39B-220ENST00000482195 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDX39B-220ENST00000482195 ZNF280AP59817 542 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-220ENST00000482195 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
DDX39B-220ENST00000482195 USP17L1Q7RTZ2 530 aa13.28□□□□□ -0.28
DDX39B-220ENST00000482195 CDC5LQ99459 802 aaKnown RBP13.28□□□□□ -0.28
DDX39B-220ENST00000482195 ZNF609O15014 1411 aa13.28□□□□□ -0.28
DDX39B-220ENST00000482195 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.28
DDX39B-220ENST00000482195 APAF1O14727 1248 aa13.27□□□□□ -0.29
DDX39B-220ENST00000482195 CTSWP56202 376 aa13.27□□□□□ -0.29
DDX39B-220ENST00000482195 CTU1Q7Z7A3 348 aaKnown RBP13.27□□□□□ -0.29
DDX39B-220ENST00000482195 CSRNP1Q96S65 589 aa13.27□□□□□ -0.29
DDX39B-220ENST00000482195 METTL22Q9BUU2 404 aaPredicted RBP13.27□□□□□ -0.29
DDX39B-220ENST00000482195 MAP3K2Q9Y2U5 619 aa13.27□□□□□ -0.29
DDX39B-220ENST00000482195 ZNF853P0CG23 659 aa13.26□□□□□ -0.29
DDX39B-220ENST00000482195 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
DDX39B-220ENST00000482195 CCDC30Q5VVM6 783 aa13.26□□□□□ -0.29
DDX39B-220ENST00000482195 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
DDX39B-220ENST00000482195 MOB2Q70IA6 237 aa13.26□□□□□ -0.29
DDX39B-220ENST00000482195 PITPNM2Q9BZ72 1349 aa13.26□□□□□ -0.29
DDX39B-220ENST00000482195 HDAC9Q9UKV0 1011 aa13.26□□□□□ -0.29
DDX39B-220ENST00000482195 MED23Q9ULK4 1368 aa13.26□□□□□ -0.29
DDX39B-220ENST00000482195 NF2P35240 595 aa13.25□□□□□ -0.29
DDX39B-220ENST00000482195 FKBP1BP68106 108 aa13.25□□□□□ -0.29
DDX39B-220ENST00000482195 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
DDX39B-220ENST00000482195 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
DDX39B-220ENST00000482195 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
DDX39B-220ENST00000482195 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
DDX39B-220ENST00000482195 ECM29Q5VYK3 1845 aa13.25□□□□□ -0.29
DDX39B-220ENST00000482195 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
DDX39B-220ENST00000482195 SASH1O94885 1247 aa13.24□□□□□ -0.29
DDX39B-220ENST00000482195 NBPF9Q3BBW0 867 aa13.24□□□□□ -0.29
DDX39B-220ENST00000482195 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
DDX39B-220ENST00000482195 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
DDX39B-220ENST00000482195 GMLQ99445 158 aa13.24□□□□□ -0.29
DDX39B-220ENST00000482195 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
DDX39B-220ENST00000482195 GREM2Q9H772 168 aa13.24□□□□□ -0.29
DDX39B-220ENST00000482195 A0A1B0GUL6 1792 aa13.23□□□□□ -0.29
DDX39B-220ENST00000482195 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
DDX39B-220ENST00000482195 TBC1D8O95759 1140 aa13.23□□□□□ -0.29
DDX39B-220ENST00000482195 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
DDX39B-220ENST00000482195 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
DDX39B-220ENST00000482195 PRKG1Q13976 671 aa13.23□□□□□ -0.29
DDX39B-220ENST00000482195 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
DDX39B-220ENST00000482195 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
DDX39B-220ENST00000482195 MINPP1Q9UNW1 487 aa13.23□□□□□ -0.29
DDX39B-220ENST00000482195 MYO3BQ8WXR4 1341 aa13.22□□□□□ -0.29
DDX39B-220ENST00000482195 WTIPA6NIX2 430 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms